| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024485
Identifier: 238024485
GI number: 238024485
Start: 1385927
End: 1387738
Strand: Direct
Name: 238024485
Synonym: bglu_2g10840
Alternate gene names: NA
Gene position: 1385927-1387738 (Clockwise)
Preceding gene: 238024484
Following gene: 238024486
Centisome position: 49.02
GC content: 65.23
Gene sequence:
>1812_bases ATGACCAAGTTCATCTCCGCGACCCACGACAAGGCCACGCTGACCGTGCAGTACGTCGCCGACAACGGCGACATCCTGCT GCGCAGCGGCGGCACCATCGCCTGGCGCTTCAACAATCCCGGCAACCTGCGGCCGAAGTCGAAATACGTGAAGACCTCGA TCGGCGTGGGCAGTACCGCGAGCGGCAATTTCTTCATCTTCCCCGACTACGAAACCGGCCGCGCGGAGAAGAAGGCGCTG CTGCGCCGCAAGTACAACGACATGTCGATCTCGGAGGCGCTGCAGGTGTACGCGCCGCCCAGCGAGAACAACACCGAGGC GTACATCCAGGCGATCTGCAGCGGCACCGGCTTTGCCCGCACGCGCGTGCTCAATACCATGAGCGACGCCGATCTCGAGT CGATGATGACCGTGATGGAGAAGCACGAGGGCTACAACGCGCGGATCAAGACGCGCCACGAACGCTGGATTCGCACCGCG TCGGTCACGCTGTCCGACGGCGCCAAGCCGATCGCGAACCAGAAGGTGACGGTGCAGGCCGGCGCGAAGAAGACCGAGCT GACCACCAACGCGTTCGGCCAGCTGCCGCTGCTGCCGATCGAGTCGGCCGGGCAGCAGATCCAGTTTCTCGTCGATCACG CGAAGGAGGGCATGAAGCAGATCGGGCAGATCACGACGCAGAACGTTTCGTCCGCCTACGTGTTCTTCCACGACCTGTTC CAGACCACCGCGCCCACCAGCACGCACTACGCGAAGGACACGGTCCGGCACGAGGCGATTCCCGGCTTTCGCTACCGGAT CGTGTCGGGCGACACGCTCGGCAAGATCGCGCACAAGTTCAAGGTCAGCGTCGCGCAGTTGCAGGCCGACAACCATCTGA AGTCGACGCGGATCTTCGCCGGCGACTATCTGATGATCAACGCGAAGAAGCCGCACGATGCCCCGGCCGCGCCGCCGAAC CCGAGCGCGGTGAAGTCGGCTGCCAAGCATCACGCCGCGTCCGCGAGCGCCGCGTCCACCGCGAGCAGCCCGGCGCCGGC GTCCTCGTCGGCGGGCACGCAGGGCCACGCCGTCAGCATCGACGACTTCGCGAAGCCCGCCGGCGGCGCCACCCCGGCCC CGGCCGCAGCCAAGGCCGCGCCGGCCGCCGCGGCGTCCGCCCATCCGGCGGCATCCGCCCCGACGGCCGACAGCTCGGTG GTGCTCGACCGCAGCAAGCTCGGCCAGGGGCATCCGGTGGCGTTCGTGCCGGCCAGCTCGCCGCAGGCGCCGTGGATGGA GTTCGCGCTGCAGCAGGCCAAGTTCTGGCACGGCCAGAAGGAGAACGTGATCACCAAGACGATCAACTACCACAAGGAAG TGGGCGGTTCGCTGAAGTCGCTGGTCGGCGACAGCAACCCGTGGTGCGCGTCGTTCGTCAACTGGTGCCTGCAGAGCGCG AAGTATCCGAAGACGGCCGCGCCGATGGATTCGCAGTCGTTTCGCTACAGCAAGAACTTCGTCAAGATCGACAAGCCGGT GTTCGGCGCCATCGCGGTCTACAAGCACAGGAAGGGTGGCCATGCAGCGTTCGTCTATGCGCAGACCAGCGCCGGCTCGC CGATCCTGCTGGGCGGCAACCAGAGCGATGCGATCAACTTCGGCAAGCAGAAGGCCGCTGAGCTGAAGGGCTTCTACGTG CCCGCCACCTACCTGAAGTTCGCGAAGGAGGAACTCGCGAAAGGCGCCAAACTCGAAGTGTCGACGCCCGAAAAACTGAA CGAGGAATTTCACATTGCATTCTCCAAGAAGAAGGCCAATGCGGATCGCTGA
Upstream 100 bases:
>100_bases AGCGAGCAGCAGAACTACACCGTCGAGCGCGCGCTGGCCGAGACCGCGAAGGCGCTGCACTGATCCCGAACGCGTTGCGT CCATCCGCTTCCCGACGAAC
Downstream 100 bases:
>100_bases GCTGCTGTGTGCGGCGCTGCTCGGCGGCGCCGTGCCGCTTGCGCACGCGGCCGGCGCCGATTGCCTGACCCAGGCCGAGG TGACGAAGCTCGATACCGAT
Product: putative LysM domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MTKFISATHDKATLTVQYVADNGDILLRSGGTIAWRFNNPGNLRPKSKYVKTSIGVGSTASGNFFIFPDYETGRAEKKAL LRRKYNDMSISEALQVYAPPSENNTEAYIQAICSGTGFARTRVLNTMSDADLESMMTVMEKHEGYNARIKTRHERWIRTA SVTLSDGAKPIANQKVTVQAGAKKTELTTNAFGQLPLLPIESAGQQIQFLVDHAKEGMKQIGQITTQNVSSAYVFFHDLF QTTAPTSTHYAKDTVRHEAIPGFRYRIVSGDTLGKIAHKFKVSVAQLQADNHLKSTRIFAGDYLMINAKKPHDAPAAPPN PSAVKSAAKHHAASASAASTASSPAPASSSAGTQGHAVSIDDFAKPAGGATPAPAAAKAAPAAAASAHPAASAPTADSSV VLDRSKLGQGHPVAFVPASSPQAPWMEFALQQAKFWHGQKENVITKTINYHKEVGGSLKSLVGDSNPWCASFVNWCLQSA KYPKTAAPMDSQSFRYSKNFVKIDKPVFGAIAVYKHRKGGHAAFVYAQTSAGSPILLGGNQSDAINFGKQKAAELKGFYV PATYLKFAKEELAKGAKLEVSTPEKLNEEFHIAFSKKKANADR
Sequences:
>Translated_603_residues MTKFISATHDKATLTVQYVADNGDILLRSGGTIAWRFNNPGNLRPKSKYVKTSIGVGSTASGNFFIFPDYETGRAEKKAL LRRKYNDMSISEALQVYAPPSENNTEAYIQAICSGTGFARTRVLNTMSDADLESMMTVMEKHEGYNARIKTRHERWIRTA SVTLSDGAKPIANQKVTVQAGAKKTELTTNAFGQLPLLPIESAGQQIQFLVDHAKEGMKQIGQITTQNVSSAYVFFHDLF QTTAPTSTHYAKDTVRHEAIPGFRYRIVSGDTLGKIAHKFKVSVAQLQADNHLKSTRIFAGDYLMINAKKPHDAPAAPPN PSAVKSAAKHHAASASAASTASSPAPASSSAGTQGHAVSIDDFAKPAGGATPAPAAAKAAPAAAASAHPAASAPTADSSV VLDRSKLGQGHPVAFVPASSPQAPWMEFALQQAKFWHGQKENVITKTINYHKEVGGSLKSLVGDSNPWCASFVNWCLQSA KYPKTAAPMDSQSFRYSKNFVKIDKPVFGAIAVYKHRKGGHAAFVYAQTSAGSPILLGGNQSDAINFGKQKAAELKGFYV PATYLKFAKEELAKGAKLEVSTPEKLNEEFHIAFSKKKANADR >Mature_602_residues TKFISATHDKATLTVQYVADNGDILLRSGGTIAWRFNNPGNLRPKSKYVKTSIGVGSTASGNFFIFPDYETGRAEKKALL RRKYNDMSISEALQVYAPPSENNTEAYIQAICSGTGFARTRVLNTMSDADLESMMTVMEKHEGYNARIKTRHERWIRTAS VTLSDGAKPIANQKVTVQAGAKKTELTTNAFGQLPLLPIESAGQQIQFLVDHAKEGMKQIGQITTQNVSSAYVFFHDLFQ TTAPTSTHYAKDTVRHEAIPGFRYRIVSGDTLGKIAHKFKVSVAQLQADNHLKSTRIFAGDYLMINAKKPHDAPAAPPNP SAVKSAAKHHAASASAASTASSPAPASSSAGTQGHAVSIDDFAKPAGGATPAPAAAKAAPAAAASAHPAASAPTADSSVV LDRSKLGQGHPVAFVPASSPQAPWMEFALQQAKFWHGQKENVITKTINYHKEVGGSLKSLVGDSNPWCASFVNWCLQSAK YPKTAAPMDSQSFRYSKNFVKIDKPVFGAIAVYKHRKGGHAAFVYAQTSAGSPILLGGNQSDAINFGKQKAAELKGFYVP ATYLKFAKEELAKGAKLEVSTPEKLNEEFHIAFSKKKANADR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64761; Mature: 64629
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFISATHDKATLTVQYVADNGDILLRSGGTIAWRFNNPGNLRPKSKYVKTSIGVGSTA CCCCCCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCHHHEEECCCCCCC SGNFFIFPDYETGRAEKKALLRRKYNDMSISEALQVYAPPSENNTEAYIQAICSGTGFAR CCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHEEECCCCCCCHHHHHHHHHCCCCHHH TRVLNTMSDADLESMMTVMEKHEGYNARIKTRHERWIRTASVTLSDGAKPIANQKVTVQA HHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHEEEEEEEECCCCCCCCCCEEEEEC GAKKTELTTNAFGQLPLLPIESAGQQIQFLVDHAKEGMKQIGQITTQNVSSAYVFFHDLF CCCCCEEECCCCCCCCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QTTAPTSTHYAKDTVRHEAIPGFRYRIVSGDTLGKIAHKFKVSVAQLQADNHLKSTRIFA HHCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE GDYLMINAKKPHDAPAAPPNPSAVKSAAKHHAASASAASTASSPAPASSSAGTQGHAVSI CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEH DDFAKPAGGATPAPAAAKAAPAAAASAHPAASAPTADSSVVLDRSKLGQGHPVAFVPASS HHHCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCC PQAPWMEFALQQAKFWHGQKENVITKTINYHKEVGGSLKSLVGDSNPWCASFVNWCLQSA CCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCC KYPKTAAPMDSQSFRYSKNFVKIDKPVFGAIAVYKHRKGGHAAFVYAQTSAGSPILLGGN CCCCCCCCCCCCCCCCCCCEEEECCCHHCEEEEEEECCCCCEEEEEEECCCCCEEEECCC QSDAINFGKQKAAELKGFYVPATYLKFAKEELAKGAKLEVSTPEKLNEEFHIAFSKKKAN CCCCHHCCHHHHHHHCCEECCHHHHHHHHHHHCCCCEEEECCHHHCCCEEEEEEEECCCC ADR CCC >Mature Secondary Structure TKFISATHDKATLTVQYVADNGDILLRSGGTIAWRFNNPGNLRPKSKYVKTSIGVGSTA CCCCCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCHHHEEECCCCCCC SGNFFIFPDYETGRAEKKALLRRKYNDMSISEALQVYAPPSENNTEAYIQAICSGTGFAR CCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHEEECCCCCCCHHHHHHHHHCCCCHHH TRVLNTMSDADLESMMTVMEKHEGYNARIKTRHERWIRTASVTLSDGAKPIANQKVTVQA HHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHEEEEEEEECCCCCCCCCCEEEEEC GAKKTELTTNAFGQLPLLPIESAGQQIQFLVDHAKEGMKQIGQITTQNVSSAYVFFHDLF CCCCCEEECCCCCCCCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QTTAPTSTHYAKDTVRHEAIPGFRYRIVSGDTLGKIAHKFKVSVAQLQADNHLKSTRIFA HHCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE GDYLMINAKKPHDAPAAPPNPSAVKSAAKHHAASASAASTASSPAPASSSAGTQGHAVSI CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEH DDFAKPAGGATPAPAAAKAAPAAAASAHPAASAPTADSSVVLDRSKLGQGHPVAFVPASS HHHCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCC PQAPWMEFALQQAKFWHGQKENVITKTINYHKEVGGSLKSLVGDSNPWCASFVNWCLQSA CCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCC KYPKTAAPMDSQSFRYSKNFVKIDKPVFGAIAVYKHRKGGHAAFVYAQTSAGSPILLGGN CCCCCCCCCCCCCCCCCCCEEEECCCHHCEEEEEEECCCCCEEEEEEECCCCCEEEECCC QSDAINFGKQKAAELKGFYVPATYLKFAKEELAKGAKLEVSTPEKLNEEFHIAFSKKKAN CCCCHHCCHHHHHHHCCEECCHHHHHHHHHHHCCCCEEEECCHHHCCCEEEEEEEECCCC ADR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA