| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024482
Identifier: 238024482
GI number: 238024482
Start: 1378589
End: 1380013
Strand: Direct
Name: 238024482
Synonym: bglu_2g10800
Alternate gene names: NA
Gene position: 1378589-1380013 (Clockwise)
Preceding gene: 238024481
Following gene: 238024483
Centisome position: 48.76
GC content: 58.32
Gene sequence:
>1425_bases ATGGATATCGAAGCAATCAAGCAGCGGGCCGCGGCCGCCGGCAGCGCTCAGACGGGCGATCTACCCGTCACGCCTCAGGA TTTCGGAGCAAAGGGCGATGGCGTCACGATCGACACGGCCGCGCTCGTGGCCTGGCTCGACGCGTTGTCCGACACGAAAT CGGGCTACATCCCGGCCGGCACTTATCTGTTCGATCAGCAATTGCAGAAGTCGGGCAGCGGTATCACTATCCGCGGCGAT GCCTATGCGTCAGTCCTGAAATACGTCGGCGCCGCTACCGCCGACGACCTGATCGTGTTGGGAGACGGCACCAACAACCA GAACAACTGGCTGCTCTCAGGGTTTCGCGTAACGTCCGGCACGACCATGACACAGGGCTACGCGCTGCGCATGCAGCGTT TTTCGGATTCGTTCGTCGACCAGGTGATTGCCGACGGCATGGACGGAGGCCGCACGCTATGGAACGGCTATTTTTTTGAC GGCTGCCACGAGGTTTGGCTCAACGATTTCGGCGTTGAGTGCCAATACAACGGGTTATCCGTAACAGGAAACGACCGCTC CTCCAACGCGGATCTGTATTTGTCGAATGGTTATCTGAATTACTGCGGTGCGGCCGGTATCCGGTGTGGCGGTGGGTTCG GCGGCCTGTTCATCGGCAGCAACGTGGAAATTCTCGGCAATAGTTATGCAGGGCTGGCGATCGACAACACGCTCAACAAT CAGCAAAATCGGGAAATCATTATTTCCGATGGTGCAACCTTCGATGGTCTAGGAGACCATACGACGTATGACATCATCGT GGATTGCGAGAATGCCGGAAATGGACAAATTCTCATCGACTGCTTCATGGGCTCCGCCGTCGAGAATGCGATTTATATCA AGAGATGGAACGCGGGCGTCGTCTCGATTGGCAGTCCGGAGATTTTCAATTGCCAAGGCGACGCGATCCGGGTGGACGAT CCGACCGTGCTGCTGACGGTGGCCGACAACACCATCATCCGCAACAACGGCGGTTACGGCATCCATGCAACGGTGGCACT GAATACGGAAATTCACGGCAATCCGTATTTGAGCGCGAATAGGGCCGGGGACTGGTCTCCATTGACTTATCGCGCGCCCG TTCAATTGCTGGTGTCGAGCGGGTGGACGTCCAACGCCGTTCTGAGCAAGAAAGCGAAGCGCTGTATCATCAACGGCTCG ATCAGCCAGCCAGCCGGTGCCGTTGCCTACGGCGCCGTGGTCGCGACGATCTCGCAAGGTTACGTGCCGGCATTGTCGAC GCCGATCGTGGTGGTTTATTCGGGCGGCAGCGATGGCGACGGGATCGCGCCGGGACGTGTCAATCTGGACGGCACGGTGC AGGTACTCAAGGCCATGACGAATGTCGTGAATCTCGGCTTCGTCGGCGCCTGGGACATCGACTGA
Upstream 100 bases:
>100_bases ATCAAGAGGGCCATTCCCGGTCGAACGATATTGTCGCTGGTGTCGGACATTTCGATATGTGCCAGGCATGTTGAGTTAAC GAAATACAGCGAGGAGTCAA
Downstream 100 bases:
>100_bases TTCCGTATCGCTCGGAAACGCCAAGCACGGCATGCCATCGCCCTTGCATCTAGGACGATTGGTTGTTTCGACCGGGGCTT GCTCCGAGCCGTGCGATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MDIEAIKQRAAAAGSAQTGDLPVTPQDFGAKGDGVTIDTAALVAWLDALSDTKSGYIPAGTYLFDQQLQKSGSGITIRGD AYASVLKYVGAATADDLIVLGDGTNNQNNWLLSGFRVTSGTTMTQGYALRMQRFSDSFVDQVIADGMDGGRTLWNGYFFD GCHEVWLNDFGVECQYNGLSVTGNDRSSNADLYLSNGYLNYCGAAGIRCGGGFGGLFIGSNVEILGNSYAGLAIDNTLNN QQNREIIISDGATFDGLGDHTTYDIIVDCENAGNGQILIDCFMGSAVENAIYIKRWNAGVVSIGSPEIFNCQGDAIRVDD PTVLLTVADNTIIRNNGGYGIHATVALNTEIHGNPYLSANRAGDWSPLTYRAPVQLLVSSGWTSNAVLSKKAKRCIINGS ISQPAGAVAYGAVVATISQGYVPALSTPIVVVYSGGSDGDGIAPGRVNLDGTVQVLKAMTNVVNLGFVGAWDID
Sequences:
>Translated_474_residues MDIEAIKQRAAAAGSAQTGDLPVTPQDFGAKGDGVTIDTAALVAWLDALSDTKSGYIPAGTYLFDQQLQKSGSGITIRGD AYASVLKYVGAATADDLIVLGDGTNNQNNWLLSGFRVTSGTTMTQGYALRMQRFSDSFVDQVIADGMDGGRTLWNGYFFD GCHEVWLNDFGVECQYNGLSVTGNDRSSNADLYLSNGYLNYCGAAGIRCGGGFGGLFIGSNVEILGNSYAGLAIDNTLNN QQNREIIISDGATFDGLGDHTTYDIIVDCENAGNGQILIDCFMGSAVENAIYIKRWNAGVVSIGSPEIFNCQGDAIRVDD PTVLLTVADNTIIRNNGGYGIHATVALNTEIHGNPYLSANRAGDWSPLTYRAPVQLLVSSGWTSNAVLSKKAKRCIINGS ISQPAGAVAYGAVVATISQGYVPALSTPIVVVYSGGSDGDGIAPGRVNLDGTVQVLKAMTNVVNLGFVGAWDID >Mature_474_residues MDIEAIKQRAAAAGSAQTGDLPVTPQDFGAKGDGVTIDTAALVAWLDALSDTKSGYIPAGTYLFDQQLQKSGSGITIRGD AYASVLKYVGAATADDLIVLGDGTNNQNNWLLSGFRVTSGTTMTQGYALRMQRFSDSFVDQVIADGMDGGRTLWNGYFFD GCHEVWLNDFGVECQYNGLSVTGNDRSSNADLYLSNGYLNYCGAAGIRCGGGFGGLFIGSNVEILGNSYAGLAIDNTLNN QQNREIIISDGATFDGLGDHTTYDIIVDCENAGNGQILIDCFMGSAVENAIYIKRWNAGVVSIGSPEIFNCQGDAIRVDD PTVLLTVADNTIIRNNGGYGIHATVALNTEIHGNPYLSANRAGDWSPLTYRAPVQLLVSSGWTSNAVLSKKAKRCIINGS ISQPAGAVAYGAVVATISQGYVPALSTPIVVVYSGGSDGDGIAPGRVNLDGTVQVLKAMTNVVNLGFVGAWDID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49796; Mature: 49796
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIEAIKQRAAAAGSAQTGDLPVTPQDFGAKGDGVTIDTAALVAWLDALSDTKSGYIPAG CCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCC TYLFDQQLQKSGSGITIRGDAYASVLKYVGAATADDLIVLGDGTNNQNNWLLSGFRVTSG HHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEECC TTMTQGYALRMQRFSDSFVDQVIADGMDGGRTLWNGYFFDGCHEVWLNDFGVECQYNGLS CEECCCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCHHHHHHCCCCCEEEECCEE VTGNDRSSNADLYLSNGYLNYCGAAGIRCGGGFGGLFIGSNVEILGNSYAGLAIDNTLNN EECCCCCCCCCEEEECCCEEECCCCCCEECCCCCCEEECCCEEEECCCCCCEEEECCCCC QQNREIIISDGATFDGLGDHTTYDIIVDCENAGNGQILIDCFMGSAVENAIYIKRWNAGV CCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCE VSIGSPEIFNCQGDAIRVDDPTVLLTVADNTIIRNNGGYGIHATVALNTEIHGNPYLSAN EECCCCCEEECCCCEEEECCCEEEEEEECCEEEECCCCCEEEEEEEEEEEECCCCEEECC RAGDWSPLTYRAPVQLLVSSGWTSNAVLSKKAKRCIINGSISQPAGAVAYGAVVATISQG CCCCCCCEEECCCEEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCC YVPALSTPIVVVYSGGSDGDGIAPGRVNLDGTVQVLKAMTNVVNLGFVGAWDID CCCCCCCCEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCEEEEECCC >Mature Secondary Structure MDIEAIKQRAAAAGSAQTGDLPVTPQDFGAKGDGVTIDTAALVAWLDALSDTKSGYIPAG CCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCC TYLFDQQLQKSGSGITIRGDAYASVLKYVGAATADDLIVLGDGTNNQNNWLLSGFRVTSG HHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEECC TTMTQGYALRMQRFSDSFVDQVIADGMDGGRTLWNGYFFDGCHEVWLNDFGVECQYNGLS CEECCCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCHHHHHHCCCCCEEEECCEE VTGNDRSSNADLYLSNGYLNYCGAAGIRCGGGFGGLFIGSNVEILGNSYAGLAIDNTLNN EECCCCCCCCCEEEECCCEEECCCCCCEECCCCCCEEECCCEEEECCCCCCEEEECCCCC QQNREIIISDGATFDGLGDHTTYDIIVDCENAGNGQILIDCFMGSAVENAIYIKRWNAGV CCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCE VSIGSPEIFNCQGDAIRVDDPTVLLTVADNTIIRNNGGYGIHATVALNTEIHGNPYLSAN EECCCCCEEECCCCEEEECCCEEEEEEECCEEEECCCCCEEEEEEEEEEEECCCCEEECC RAGDWSPLTYRAPVQLLVSSGWTSNAVLSKKAKRCIINGSISQPAGAVAYGAVVATISQG CCCCCCCEEECCCEEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCC YVPALSTPIVVVYSGGSDGDGIAPGRVNLDGTVQVLKAMTNVVNLGFVGAWDID CCCCCCCCEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA