| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024474
Identifier: 238024474
GI number: 238024474
Start: 1365936
End: 1367111
Strand: Direct
Name: 238024474
Synonym: bglu_2g10700
Alternate gene names: NA
Gene position: 1365936-1367111 (Clockwise)
Preceding gene: 238024473
Following gene: 238024479
Centisome position: 48.31
GC content: 54.0
Gene sequence:
>1176_bases TTGAATCAGATGGGTAGTGTTTGGCAAGTCAATCAAATTAATCCAGTACAGGCCGCGACGACTATGAACATCAGAAAACT TGGCGCTTGCACCGCGCTTATGGTTGGTTCAATTTTTTTGTTTCCCTTATACGCGAACGCAGATACGGACTGCGTGCAAT CGCCGTCGAAGACCATGGCCGATCTGTATGACGGCTCCAACGTAACCGTGCTGGCGCATCGAGGGCTGTGGGGCGGCTAT CTGGCCGGGAACAACGCTCCCGAGAATTCGTACACGGCTTTTGCGCAAGCCGATTCGCGATGCATGGACGGCATCGAAAT CGACGTCAAGATGACGCGCGATGGCGTGCCGGTCGCCATGCATGATTTCAACCTTGGCCGCACCACCAGCATCTGGCAGG GAGCCAGGCAGCAAAAGTACGATCCCTATAAAAACACCGGATACAATCCGAGCGTCGATTCGATCAGCTCCTTCACCTTG AGCTACGCGAGGCTCTTGTCGCCGGACCGATCGAAAATCACCCGTGAGAGCATTCCCACGATTCAAAAGGTCATCGACGG GTGGATCAAGTTCAAGTATCGCTCGATTCTCGTTTTCGATACGAAAACCGCCTCCGCGGTTACGGCCATCGGCAAGATTA TCAAGGCCGAGGGCAATGTTACGGATCCGGGCAAGGGCAGTATCTATCAGAAATCCGATTACTTTGCGATGAAGGTGAAC GCCACCACCTTCCCGTCGTATCAGAGCTTCCTGAACGCCGTCGGCGGCCCTGGCCTGAGCACCGCGATTCCGGTGTTTAC GCCCAACATGCTCACCAAGATCGATGTGGGCAGCGTCATTAAGAACTGGTATTCGGGCCAGGTCTTTGAAATCGACGTGA AGAATCGCGGCGGACTGCTTCAAAACTATATGAATCAGGTCAGGCGCGATTACTACAACGTCGGCGTATTCAATGCGCTT CCCGATGCGAACCCGTCGAAGGGCGAGTTCTTCAAGAATACGGGGCAGTGCTGCTATACGCTTGATTCGCTGCTGGTGGT CAGCCCGACCTTGAAGGATACCCAGGATCTCCGTGGCGATTGGAACTATCTGATCGATCAGGGCTTCAAGACCATCACCA GTGACGATAGCTACCGGCTTACGGTTTATCTCAGGTCGAAGGGCCTGCATTCCTGA
Upstream 100 bases:
>100_bases TCGAAATCGCGCAGATGTCATCAACGACATAAGGGAGGGCAAACTGGCAGAAAAGCAAATTTCATTAACTTCATCAAAAT AAAAGGATTGCTTTAAAAAT
Downstream 100 bases:
>100_bases TCCGGCGGCCTCATTCGGCGTGCTGTCGAGCGGGCGCCTGGTGATTGCCCGTTCGCCGATGCTCGAATGATGGCAGCAGT CAGGCCAGGCACGGCGTGCC
Product: glycerophosphoryl diester phosphodiesterase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNQMGSVWQVNQINPVQAATTMNIRKLGACTALMVGSIFLFPLYANADTDCVQSPSKTMADLYDGSNVTVLAHRGLWGGY LAGNNAPENSYTAFAQADSRCMDGIEIDVKMTRDGVPVAMHDFNLGRTTSIWQGARQQKYDPYKNTGYNPSVDSISSFTL SYARLLSPDRSKITRESIPTIQKVIDGWIKFKYRSILVFDTKTASAVTAIGKIIKAEGNVTDPGKGSIYQKSDYFAMKVN ATTFPSYQSFLNAVGGPGLSTAIPVFTPNMLTKIDVGSVIKNWYSGQVFEIDVKNRGGLLQNYMNQVRRDYYNVGVFNAL PDANPSKGEFFKNTGQCCYTLDSLLVVSPTLKDTQDLRGDWNYLIDQGFKTITSDDSYRLTVYLRSKGLHS
Sequences:
>Translated_391_residues MNQMGSVWQVNQINPVQAATTMNIRKLGACTALMVGSIFLFPLYANADTDCVQSPSKTMADLYDGSNVTVLAHRGLWGGY LAGNNAPENSYTAFAQADSRCMDGIEIDVKMTRDGVPVAMHDFNLGRTTSIWQGARQQKYDPYKNTGYNPSVDSISSFTL SYARLLSPDRSKITRESIPTIQKVIDGWIKFKYRSILVFDTKTASAVTAIGKIIKAEGNVTDPGKGSIYQKSDYFAMKVN ATTFPSYQSFLNAVGGPGLSTAIPVFTPNMLTKIDVGSVIKNWYSGQVFEIDVKNRGGLLQNYMNQVRRDYYNVGVFNAL PDANPSKGEFFKNTGQCCYTLDSLLVVSPTLKDTQDLRGDWNYLIDQGFKTITSDDSYRLTVYLRSKGLHS >Mature_391_residues MNQMGSVWQVNQINPVQAATTMNIRKLGACTALMVGSIFLFPLYANADTDCVQSPSKTMADLYDGSNVTVLAHRGLWGGY LAGNNAPENSYTAFAQADSRCMDGIEIDVKMTRDGVPVAMHDFNLGRTTSIWQGARQQKYDPYKNTGYNPSVDSISSFTL SYARLLSPDRSKITRESIPTIQKVIDGWIKFKYRSILVFDTKTASAVTAIGKIIKAEGNVTDPGKGSIYQKSDYFAMKVN ATTFPSYQSFLNAVGGPGLSTAIPVFTPNMLTKIDVGSVIKNWYSGQVFEIDVKNRGGLLQNYMNQVRRDYYNVGVFNAL PDANPSKGEFFKNTGQCCYTLDSLLVVSPTLKDTQDLRGDWNYLIDQGFKTITSDDSYRLTVYLRSKGLHS
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43246; Mature: 43246
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQMGSVWQVNQINPVQAATTMNIRKLGACTALMVGSIFLFPLYANADTDCVQSPSKTMA CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCCHHHHH DLYDGSNVTVLAHRGLWGGYLAGNNAPENSYTAFAQADSRCMDGIEIDVKMTRDGVPVAM HHCCCCCEEEEEECCCCCCEECCCCCCCCCEEEHHHHCHHHCCCEEEEEEEECCCCCEEE HDFNLGRTTSIWQGARQQKYDPYKNTGYNPSVDSISSFTLSYARLLSPDRSKITRESIPT EECCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IQKVIDGWIKFKYRSILVFDTKTASAVTAIGKIIKAEGNVTDPGKGSIYQKSDYFAMKVN HHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEE ATTFPSYQSFLNAVGGPGLSTAIPVFTPNMLTKIDVGSVIKNWYSGQVFEIDVKNRGGLL CCCCCHHHHHHHHHCCCCCCCCCCEECCCHHEECCHHHHHHHHHCCEEEEEEECCCCCHH QNYMNQVRRDYYNVGVFNALPDANPSKGEFFKNTGQCCYTLDSLLVVSPTLKDTQDLRGD HHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCCHHEEECCHHEECCCCCCHHHHCCC WNYLIDQGFKTITSDDSYRLTVYLRSKGLHS HHHHHHCCCCEECCCCCEEEEEEEECCCCCC >Mature Secondary Structure MNQMGSVWQVNQINPVQAATTMNIRKLGACTALMVGSIFLFPLYANADTDCVQSPSKTMA CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCCHHHHH DLYDGSNVTVLAHRGLWGGYLAGNNAPENSYTAFAQADSRCMDGIEIDVKMTRDGVPVAM HHCCCCCEEEEEECCCCCCEECCCCCCCCCEEEHHHHCHHHCCCEEEEEEEECCCCCEEE HDFNLGRTTSIWQGARQQKYDPYKNTGYNPSVDSISSFTLSYARLLSPDRSKITRESIPT EECCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IQKVIDGWIKFKYRSILVFDTKTASAVTAIGKIIKAEGNVTDPGKGSIYQKSDYFAMKVN HHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEE ATTFPSYQSFLNAVGGPGLSTAIPVFTPNMLTKIDVGSVIKNWYSGQVFEIDVKNRGGLL CCCCCHHHHHHHHHCCCCCCCCCCEECCCHHEECCHHHHHHHHHCCEEEEEEECCCCCHH QNYMNQVRRDYYNVGVFNALPDANPSKGEFFKNTGQCCYTLDSLLVVSPTLKDTQDLRGD HHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCCHHEEECCHHEECCCCCCHHHHCCC WNYLIDQGFKTITSDDSYRLTVYLRSKGLHS HHHHHHCCCCEECCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA