Click here to switch to the map view.

The map label for this gene is 238024459

Identifier: 238024459

GI number: 238024459

Start: 1347085

End: 1348227

Strand: Reverse

Name: 238024459

Synonym: bglu_2g10550

Alternate gene names: NA

Gene position: 1348227-1347085 (Counterclockwise)

Preceding gene: 238024460

Following gene: 238024458

Centisome position: 47.69

GC content: 68.77

Gene sequence:

>1143_bases
ATGCAAGCATCCGCCAATCTGGCACTTTGCGGCGCCCTGTGCGCGATCAGCGGCGCGGCCGCGGCGCAATCGAGCGTCAC
GATGTACGGCATCATCGATACCGGGATCGAATACGTCTCGCACGCCAACGCGGCGGGCAAGAGCCTGTTGCGCATGCCCG
GCGTCACGGGAGAGCTGCCGTCGCGCTGGGGCCTGCGCGGCAGCGAGGATCTGGGCGGAGGCTACAGCGCGGTGTTCACG
CTGGAAAGCGGCTTCAACGTCCGTGCCGGCGATTCGGGCCAGGGCGGCCGGCTGTTCGGACGGCAGGCGTTCGTCGGCAT
CAAGAGCCCGTATGGCACGCTGAGCTTCGGCCGCCAGTACACGATGACCTATCTCGCCCTGATGGGCGCGGACCTGATCG
GCCCGGACATCTACGGGCTCGGCTCGTTCGATGCCTATGTGCCGAACGCGCGCGCCGACAACTCGGTGACCTACCTGGGC
AATTACGCCGGGGTCACGCTGGGCGCGAACTACTCGTTCGGCCGCGATTCGACCGGCACCGGCAATTCGCCCGGGCAAGG
CACCTGCACGGGATCGGTGGCGGGACGCCCGACCGAGTGCCGCGAATGGTCGCTGATGCTGAAGTACGACACGCCGCTGT
TCGGCGTCGCGGCCTCCTACGAGGAACAGCGCGGCGGCAGCAACGCGGCGGCGAATTTCTTCGACGGCGTGGCGCCGACG
CCGCTGGCCGATGCCGCCGACAAGGACATCCGCACCCACGTGAGCGCATACGCGAACCTCGGCAGCAAGGCGAAACTCGG
CCTCGGCTGGCTGAACCGGCGCGTGCAGCCGCTCGCGGCGTCGCTCGCCGGCGTGCGCACCAACCTGTTCTTCGTCGGCG
CGTCCTACTTCGTCACGCCCGCCTTCATCGTCGACGGCGAGGTCTATCACATCGACAACCCGCAGCACGACACGCGCGCG
ACGATGGGCACGCTGCGCGGCACCTATCTGCTGTCGAAGCGCACGGCCGTCTATGCCCAGGCCTCCTATCTCGGCAACAG
CGCGAAGGCCCGCTATTCGGTCAGCGGCGGCGGCGGCGGCACGACGCCCGCGGCCGGTGTGGGCCAGACCGGCGTGATGC
TCGGCATGCGCCACTCGTTCTAG

Upstream 100 bases:

>100_bases
CGCGAGCCGCCGACTGAACGCGCGCCCCCGCACCAGACACCCATAACCACCAACGACATTGCGAATCCGGCAGTTCCTCA
ACGGTTTGGAGACACCACTC

Downstream 100 bases:

>100_bases
ACCTTCCGGAGTTCCTGCCATGCACCCTACCTCGATCGTCACCGCCGTGGCGGCCTTGCTCACGCTCTCGCTCGCCGCTT
GCGGCGGCAGCGGCAGCGCC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQASANLALCGALCAISGAAAAQSSVTMYGIIDTGIEYVSHANAAGKSLLRMPGVTGELPSRWGLRGSEDLGGGYSAVFT
LESGFNVRAGDSGQGGRLFGRQAFVGIKSPYGTLSFGRQYTMTYLALMGADLIGPDIYGLGSFDAYVPNARADNSVTYLG
NYAGVTLGANYSFGRDSTGTGNSPGQGTCTGSVAGRPTECREWSLMLKYDTPLFGVAASYEEQRGGSNAAANFFDGVAPT
PLADAADKDIRTHVSAYANLGSKAKLGLGWLNRRVQPLAASLAGVRTNLFFVGASYFVTPAFIVDGEVYHIDNPQHDTRA
TMGTLRGTYLLSKRTAVYAQASYLGNSAKARYSVSGGGGGTTPAAGVGQTGVMLGMRHSF

Sequences:

>Translated_380_residues
MQASANLALCGALCAISGAAAAQSSVTMYGIIDTGIEYVSHANAAGKSLLRMPGVTGELPSRWGLRGSEDLGGGYSAVFT
LESGFNVRAGDSGQGGRLFGRQAFVGIKSPYGTLSFGRQYTMTYLALMGADLIGPDIYGLGSFDAYVPNARADNSVTYLG
NYAGVTLGANYSFGRDSTGTGNSPGQGTCTGSVAGRPTECREWSLMLKYDTPLFGVAASYEEQRGGSNAAANFFDGVAPT
PLADAADKDIRTHVSAYANLGSKAKLGLGWLNRRVQPLAASLAGVRTNLFFVGASYFVTPAFIVDGEVYHIDNPQHDTRA
TMGTLRGTYLLSKRTAVYAQASYLGNSAKARYSVSGGGGGTTPAAGVGQTGVMLGMRHSF
>Mature_380_residues
MQASANLALCGALCAISGAAAAQSSVTMYGIIDTGIEYVSHANAAGKSLLRMPGVTGELPSRWGLRGSEDLGGGYSAVFT
LESGFNVRAGDSGQGGRLFGRQAFVGIKSPYGTLSFGRQYTMTYLALMGADLIGPDIYGLGSFDAYVPNARADNSVTYLG
NYAGVTLGANYSFGRDSTGTGNSPGQGTCTGSVAGRPTECREWSLMLKYDTPLFGVAASYEEQRGGSNAAANFFDGVAPT
PLADAADKDIRTHVSAYANLGSKAKLGLGWLNRRVQPLAASLAGVRTNLFFVGASYFVTPAFIVDGEVYHIDNPQHDTRA
TMGTLRGTYLLSKRTAVYAQASYLGNSAKARYSVSGGGGGTTPAAGVGQTGVMLGMRHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39443; Mature: 39443

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASANLALCGALCAISGAAAAQSSVTMYGIIDTGIEYVSHANAAGKSLLRMPGVTGELP
CCCCCCHHHHHHHHHHCCCHHCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
SRWGLRGSEDLGGGYSAVFTLESGFNVRAGDSGQGGRLFGRQAFVGIKSPYGTLSFGRQY
CCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCEEECCEEEEEECCCCCCHHCCHHH
TMTYLALMGADLIGPDIYGLGSFDAYVPNARADNSVTYLGNYAGVTLGANYSFGRDSTGT
HHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCC
GNSPGQGTCTGSVAGRPTECREWSLMLKYDTPLFGVAASYEEQRGGSNAAANFFDGVAPT
CCCCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCHHHHCCCCCHHHHHHCCCCCC
PLADAADKDIRTHVSAYANLGSKAKLGLGWLNRRVQPLAASLAGVRTNLFFVGASYFVTP
CCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHCE
AFIVDGEVYHIDNPQHDTRATMGTLRGTYLLSKRTAVYAQASYLGNSAKARYSVSGGGGG
EEEECCEEEECCCCCCHHHHHHHHHHHEEEEECCCEEEEEHHHCCCCCCEEEEECCCCCC
TTPAAGVGQTGVMLGMRHSF
CCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MQASANLALCGALCAISGAAAAQSSVTMYGIIDTGIEYVSHANAAGKSLLRMPGVTGELP
CCCCCCHHHHHHHHHHCCCHHCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
SRWGLRGSEDLGGGYSAVFTLESGFNVRAGDSGQGGRLFGRQAFVGIKSPYGTLSFGRQY
CCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCEEECCEEEEEECCCCCCHHCCHHH
TMTYLALMGADLIGPDIYGLGSFDAYVPNARADNSVTYLGNYAGVTLGANYSFGRDSTGT
HHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCC
GNSPGQGTCTGSVAGRPTECREWSLMLKYDTPLFGVAASYEEQRGGSNAAANFFDGVAPT
CCCCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCHHHHCCCCCHHHHHHCCCCCC
PLADAADKDIRTHVSAYANLGSKAKLGLGWLNRRVQPLAASLAGVRTNLFFVGASYFVTP
CCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHCE
AFIVDGEVYHIDNPQHDTRATMGTLRGTYLLSKRTAVYAQASYLGNSAKARYSVSGGGGG
EEEECCEEEECCCCCCHHHHHHHHHHHEEEEECCCEEEEEHHHCCCCCCEEEEECCCCCC
TTPAAGVGQTGVMLGMRHSF
CCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]