| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ordL [H]
Identifier: 238024448
GI number: 238024448
Start: 1332735
End: 1334012
Strand: Direct
Name: ordL [H]
Synonym: bglu_2g10440
Alternate gene names: 238024448
Gene position: 1332735-1334012 (Clockwise)
Preceding gene: 238024447
Following gene: 238024449
Centisome position: 47.14
GC content: 69.17
Gene sequence:
>1278_bases ATGCATTTCAGTTCCTACTGGCTCGATACGTCGAAGCCGTTCGCGAGCGGCTCGGCCGAATTGCGTGAGCGGCACTGCGA CGTGTTGGTGGTGGGCGGCGGTATCACCGGCTCGGCGGCGGCCCTGGCGCTGGCCAAGAAAGGCGCGCGCGTGACCGTCT GCGAGGCGGGCACCGTCGGGCAGGCGGCCTCGGGGCGCAACGGCGGCATGTGCAACAACGGCTTCGCGCAGGATTACGCG TCGCTGGCGCAGCGCATCGGCCCGGAACTGGCCAACCGGCTCTATCTCGCGTTCGATGCGGGCGTCGACCTGGTCGAGCG GCTGGTCAGGGAGGAGTCGATCGATTGCGACTTCGTGCGCAGCGGCAAGCTCAAGCTCGCCGCGAAGCCCGAGCACTACG ACAAGCTCGTGCGCAGCCAGGCGCTGCTCGCGGCGAGCGTGGACCCCGACACCCGCATGCTGAGCAAGGCGGCGCTGCGC GACGAGATCGGCTCGGACCGGTATCATGGCGGCCTGCTGTTCGGCAAGAGCGCGGGGATGCATGTCGGCCGCTACGTGCG CGGCCTGGCGAGCGCCGCGCAGGCCCGCGGTGCGCAGATTCTCGAGCACGCGCCGGTGCTCGGCCTCGAGCGCCGGGCGG ACGGCGGCTACCTGGCGCTGACGCCGCTCGGCGAGATCCGGGCGTCCCAGGTGCTGCTTGCCAGCGGTATTTCGCAGCTC GGCCCGTTCGGCTGGATTCGCCGCCGGGTGGTGCCGGTCGGCGCGTTCATCATCGTCTCCGAGCCGTTGTCGAGCGAACG GCTCGACCGCTTGCTGCCGACGCGCCGGATGGTCACCGACACCAAGCAGTTCGTCAACTTCTTCCGCGTCACGCCGGACC AGCGCATGCTGTTCGGCGGGCGGGCGCGCTTCGCCACCTCGAACCCGCGCTCGGACCAGAAGAGCGGGCTGATCCTGCGG CGGCAGATGGCCGCCGTGTTTCCGGATCTGGCCGACGTGCGCATCGACTATTGCTGGGGCGGCATGGTGGACATGACGGC CAACCGGCTGCCGCGCGCCGGCGAGCGCGACGGCGTGTATTACTCGATGGGCTATAGCGGCCACGGCACGCAGATGGCCA CGCTGATGGGCACGCTGATGGCCGAGATCATGGACGGGCGTGCCGATCTCAACCCCTGGAAGGATTTCGACTGGCCGGCG ATTCCCGGGCATTTCGGCAAGCCCTGGTTCCTGCCGCTCGTCGGCGCCTGGTATCGACTCAAGGACACCCTGCAATGA
Upstream 100 bases:
>100_bases GAGGCGATCGCGCGCAGGCGGGCGGCGGCCCCTGGCGCGGGGCGGATCGATCCGCCTCGCGCCGGCGCGGCAGCCGGTTC TGACAGATTGGGAGTGCCTG
Downstream 100 bases:
>100_bases ACTCCCCCGTTGACCTCCTGCGGCAAGCCGGCAGGCTGGATCGTTTCTTCATCGACGGCAGCTGGGTGCTGCCCGAGGGC GGCGACCGGTTCGCCGTGGT
Product: glycine/D-amino acid oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MHFSSYWLDTSKPFASGSAELRERHCDVLVVGGGITGSAAALALAKKGARVTVCEAGTVGQAASGRNGGMCNNGFAQDYA SLAQRIGPELANRLYLAFDAGVDLVERLVREESIDCDFVRSGKLKLAAKPEHYDKLVRSQALLAASVDPDTRMLSKAALR DEIGSDRYHGGLLFGKSAGMHVGRYVRGLASAAQARGAQILEHAPVLGLERRADGGYLALTPLGEIRASQVLLASGISQL GPFGWIRRRVVPVGAFIIVSEPLSSERLDRLLPTRRMVTDTKQFVNFFRVTPDQRMLFGGRARFATSNPRSDQKSGLILR RQMAAVFPDLADVRIDYCWGGMVDMTANRLPRAGERDGVYYSMGYSGHGTQMATLMGTLMAEIMDGRADLNPWKDFDWPA IPGHFGKPWFLPLVGAWYRLKDTLQ
Sequences:
>Translated_425_residues MHFSSYWLDTSKPFASGSAELRERHCDVLVVGGGITGSAAALALAKKGARVTVCEAGTVGQAASGRNGGMCNNGFAQDYA SLAQRIGPELANRLYLAFDAGVDLVERLVREESIDCDFVRSGKLKLAAKPEHYDKLVRSQALLAASVDPDTRMLSKAALR DEIGSDRYHGGLLFGKSAGMHVGRYVRGLASAAQARGAQILEHAPVLGLERRADGGYLALTPLGEIRASQVLLASGISQL GPFGWIRRRVVPVGAFIIVSEPLSSERLDRLLPTRRMVTDTKQFVNFFRVTPDQRMLFGGRARFATSNPRSDQKSGLILR RQMAAVFPDLADVRIDYCWGGMVDMTANRLPRAGERDGVYYSMGYSGHGTQMATLMGTLMAEIMDGRADLNPWKDFDWPA IPGHFGKPWFLPLVGAWYRLKDTLQ >Mature_425_residues MHFSSYWLDTSKPFASGSAELRERHCDVLVVGGGITGSAAALALAKKGARVTVCEAGTVGQAASGRNGGMCNNGFAQDYA SLAQRIGPELANRLYLAFDAGVDLVERLVREESIDCDFVRSGKLKLAAKPEHYDKLVRSQALLAASVDPDTRMLSKAALR DEIGSDRYHGGLLFGKSAGMHVGRYVRGLASAAQARGAQILEHAPVLGLERRADGGYLALTPLGEIRASQVLLASGISQL GPFGWIRRRVVPVGAFIIVSEPLSSERLDRLLPTRRMVTDTKQFVNFFRVTPDQRMLFGGRARFATSNPRSDQKSGLILR RQMAAVFPDLADVRIDYCWGGMVDMTANRLPRAGERDGVYYSMGYSGHGTQMATLMGTLMAEIMDGRADLNPWKDFDWPA IPGHFGKPWFLPLVGAWYRLKDTLQ
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=431, Percent_Identity=31.0904872389791, Blast_Score=186, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46413; Mature: 46413
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFSSYWLDTSKPFASGSAELRERHCDVLVVGGGITGSAAALALAKKGARVTVCEAGTVG CCCCCEECCCCCCCCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCC QAASGRNGGMCNNGFAQDYASLAQRIGPELANRLYLAFDAGVDLVERLVREESIDCDFVR CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCEEEEEECCCHHHHHHHHHHCCCCCCEEE SGKLKLAAKPEHYDKLVRSQALLAASVDPDTRMLSKAALRDEIGSDRYHGGLLFGKSAGM CCCEEEEECCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC HVGRYVRGLASAAQARGAQILEHAPVLGLERRADGGYLALTPLGEIRASQVLLASGISQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHCHHHH GPFGWIRRRVVPVGAFIIVSEPLSSERLDRLLPTRRMVTDTKQFVNFFRVTPDQRMLFGG CHHHHHHHHHHCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECC RARFATSNPRSDQKSGLILRRQMAAVFPDLADVRIDYCWGGMVDMTANRLPRAGERDGVY CEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHCEEEEEECCHHHHHHHHCCCCCCCCCEE YSMGYSGHGTQMATLMGTLMAEIMDGRADLNPWKDFDWPAIPGHFGKPWFLPLVGAWYRL EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KDTLQ HHCCC >Mature Secondary Structure MHFSSYWLDTSKPFASGSAELRERHCDVLVVGGGITGSAAALALAKKGARVTVCEAGTVG CCCCCEECCCCCCCCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCC QAASGRNGGMCNNGFAQDYASLAQRIGPELANRLYLAFDAGVDLVERLVREESIDCDFVR CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCEEEEEECCCHHHHHHHHHHCCCCCCEEE SGKLKLAAKPEHYDKLVRSQALLAASVDPDTRMLSKAALRDEIGSDRYHGGLLFGKSAGM CCCEEEEECCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC HVGRYVRGLASAAQARGAQILEHAPVLGLERRADGGYLALTPLGEIRASQVLLASGISQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHCHHHH GPFGWIRRRVVPVGAFIIVSEPLSSERLDRLLPTRRMVTDTKQFVNFFRVTPDQRMLFGG CHHHHHHHHHHCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECC RARFATSNPRSDQKSGLILRRQMAAVFPDLADVRIDYCWGGMVDMTANRLPRAGERDGVY CEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHCEEEEEECCHHHHHHHHCCCCCCCCCEE YSMGYSGHGTQMATLMGTLMAEIMDGRADLNPWKDFDWPAIPGHFGKPWFLPLVGAWYRL EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KDTLQ HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]