| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is ordL [C]
Identifier: 238024447
GI number: 238024447
Start: 1331297
End: 1332622
Strand: Direct
Name: ordL [C]
Synonym: bglu_2g10430
Alternate gene names: 238024447
Gene position: 1331297-1332622 (Clockwise)
Preceding gene: 238024446
Following gene: 238024448
Centisome position: 47.09
GC content: 72.32
Gene sequence:
>1326_bases ATGTCCCCTCCGCTTCGCCATATCGAAACCCTCGCAACGCTGCCGGCCTCGGCGGATGTCGTCGTGATCGGCGGCGGCAT CGTCGGCGTGTTCACCGCCTACTACCTCGCGCGGCGCGGCGTATCGGTCGCGCTCGTCGAGAAAGGCCGGATCGGCGCGG AGCAGTCGAGCCGCAACTGGGGCTGGTGCCGCCAGCAGAACCGCGACGAGCGCGAATTGCCGATGGCGAGCAAGAGCATC GACCTATGGGAGCGCTTCGCCGCCGAAACGGGCGAGGACACCGGCTTTCGCCGCTGCGGGCTGCTGTATCTGAGCAACGA CGAGGCCGAGCTGTCGCGCTGGGCCAGCTGGGGCGAGTTCGCGAAAACCGCCGGCGTGACCACCTACATGCTCGACGGCA AGCAGGCCACCGAGCGCGGGCACGCCACCGGGCGGCCCTGGAAGGGCGGCGTGTTCTCGCCGAGCGACGGCACGGCCGAC CCGGGCAAGGCCGCGCCGGCGGTGGCCGCCGCGCTGATGAAGCTGGGCGGCAGCGTCCACCAGTCCTGCGCGGCGCGCGG CATCGAACTCGAGGGCGGGCGGGTGGCCAGCGTCGTGACCGAAGCCGGCGTGATCAGGACCCGGACCGTCGTGATGGCCG GCGGCGCCTGGGCGTCCTCGTTCTGCCGCCAGCTCGGCATCCGCTTTCCGCAGGCGTCGATCCGTCAGTCGATCCTGAGC GTGGCGCCGGTCGCGCGGCCGCTGCCGGAGGCGATGTACACCTCCGGCGTGTCGGCGACGCGCCGCAGCGACGGACGCTA CGCACTGGCGATCAGCGGCCGCGCGCGGGTGGACCCGACGCCGCAGTTCCTGCGCTTCGCGCCGCAATTCGTGCCGATGT TCGCCAAGCGCTGGCGCAATCTGCTGCCGGGCGGCCTGGAAGGGGTGCGCGGCGGCCACGAAACGCTCAAGCGCTGGCGG CTCGACGCGCCCACGCCGATGGAGGCGGTCCGCATCCTGGACCCGAAGCCCGACATGCCGACGGTCAGGGAAACCTACCG CCGCGCCGCCGAGCTGCTGCCCGAATTGGGCGACGCGAAGATCACGCATGCCTGGGCCGGCTTCGTGGACAGCACGCCGG ACGGCGTGCCCGGCATCGGCGAGGTGGCGGGCGTGCCGGGGCTAATCCTGGCGGCCGGCTTTTCCGGCCACGGCTTCGGG ATCGGGCCAGGCGCCGGCCACCTGATCGCCGATCTCGCCACGGGGGCGCCGCTGCTGGTCGACCCGCTGCCGTATCGGCC CGGCCGGTTCAACGATGCCGCCTGGGGCAAGGTCGCCGATTTCTAG
Upstream 100 bases:
>100_bases CCTGCCGCGCGGCACCCCGGTCGGCTGGGAAAGCAGCGAACGCGTGTCCAAGTTTTATGTCGTGCAGAACGTCGCCGCCT CTACCGCCCGAGACTGAACC
Downstream 100 bases:
>100_bases CCGGCCCGGCGCGAGGCGATCGCGCGCAGGCGGGCGGCGGCCCCTGGCGCGGGGCGGATCGATCCGCCTCGCGCCGGCGC GGCAGCCGGTTCTGACAGAT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSPPLRHIETLATLPASADVVVIGGGIVGVFTAYYLARRGVSVALVEKGRIGAEQSSRNWGWCRQQNRDERELPMASKSI DLWERFAAETGEDTGFRRCGLLYLSNDEAELSRWASWGEFAKTAGVTTYMLDGKQATERGHATGRPWKGGVFSPSDGTAD PGKAAPAVAAALMKLGGSVHQSCAARGIELEGGRVASVVTEAGVIRTRTVVMAGGAWASSFCRQLGIRFPQASIRQSILS VAPVARPLPEAMYTSGVSATRRSDGRYALAISGRARVDPTPQFLRFAPQFVPMFAKRWRNLLPGGLEGVRGGHETLKRWR LDAPTPMEAVRILDPKPDMPTVRETYRRAAELLPELGDAKITHAWAGFVDSTPDGVPGIGEVAGVPGLILAAGFSGHGFG IGPGAGHLIADLATGAPLLVDPLPYRPGRFNDAAWGKVADF
Sequences:
>Translated_441_residues MSPPLRHIETLATLPASADVVVIGGGIVGVFTAYYLARRGVSVALVEKGRIGAEQSSRNWGWCRQQNRDERELPMASKSI DLWERFAAETGEDTGFRRCGLLYLSNDEAELSRWASWGEFAKTAGVTTYMLDGKQATERGHATGRPWKGGVFSPSDGTAD PGKAAPAVAAALMKLGGSVHQSCAARGIELEGGRVASVVTEAGVIRTRTVVMAGGAWASSFCRQLGIRFPQASIRQSILS VAPVARPLPEAMYTSGVSATRRSDGRYALAISGRARVDPTPQFLRFAPQFVPMFAKRWRNLLPGGLEGVRGGHETLKRWR LDAPTPMEAVRILDPKPDMPTVRETYRRAAELLPELGDAKITHAWAGFVDSTPDGVPGIGEVAGVPGLILAAGFSGHGFG IGPGAGHLIADLATGAPLLVDPLPYRPGRFNDAAWGKVADF >Mature_440_residues SPPLRHIETLATLPASADVVVIGGGIVGVFTAYYLARRGVSVALVEKGRIGAEQSSRNWGWCRQQNRDERELPMASKSID LWERFAAETGEDTGFRRCGLLYLSNDEAELSRWASWGEFAKTAGVTTYMLDGKQATERGHATGRPWKGGVFSPSDGTADP GKAAPAVAAALMKLGGSVHQSCAARGIELEGGRVASVVTEAGVIRTRTVVMAGGAWASSFCRQLGIRFPQASIRQSILSV APVARPLPEAMYTSGVSATRRSDGRYALAISGRARVDPTPQFLRFAPQFVPMFAKRWRNLLPGGLEGVRGGHETLKRWRL DAPTPMEAVRILDPKPDMPTVRETYRRAAELLPELGDAKITHAWAGFVDSTPDGVPGIGEVAGVPGLILAAGFSGHGFGI GPGAGHLIADLATGAPLLVDPLPYRPGRFNDAAWGKVADF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DadA oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI197927446, Length=234, Percent_Identity=29.4871794871795, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI21361378, Length=234, Percent_Identity=29.4871794871795, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI24797151, Length=424, Percent_Identity=23.3490566037736, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI194306651, Length=410, Percent_Identity=23.9024390243902, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71994045, Length=407, Percent_Identity=22.6044226044226, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI20130091, Length=410, Percent_Identity=23.9024390243902, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI28571104, Length=425, Percent_Identity=25.8823529411765, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 - InterPro: IPR012727 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 47036; Mature: 46905
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPLRHIETLATLPASADVVVIGGGIVGVFTAYYLARRGVSVALVEKGRIGAEQSSRNW CCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC GWCRQQNRDERELPMASKSIDLWERFAAETGEDTGFRRCGLLYLSNDEAELSRWASWGEF CHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHH AKTAGVTTYMLDGKQATERGHATGRPWKGGVFSPSDGTADPGKAAPAVAAALMKLGGSVH HHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH QSCAARGIELEGGRVASVVTEAGVIRTRTVVMAGGAWASSFCRQLGIRFPQASIRQSILS HHHHHCCCCCCCCCHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHH VAPVARPLPEAMYTSGVSATRRSDGRYALAISGRARVDPTPQFLRFAPQFVPMFAKRWRN HHHHHHHCHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLPGGLEGVRGGHETLKRWRLDAPTPMEAVRILDPKPDMPTVRETYRRAAELLPELGDAK HCCCCHHHCCCCHHHHHHHCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCE ITHAWAGFVDSTPDGVPGIGEVAGVPGLILAAGFSGHGFGIGPGAGHLIADLATGAPLLV EHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE DPLPYRPGRFNDAAWGKVADF CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPPLRHIETLATLPASADVVVIGGGIVGVFTAYYLARRGVSVALVEKGRIGAEQSSRNW CCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC GWCRQQNRDERELPMASKSIDLWERFAAETGEDTGFRRCGLLYLSNDEAELSRWASWGEF CHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHH AKTAGVTTYMLDGKQATERGHATGRPWKGGVFSPSDGTADPGKAAPAVAAALMKLGGSVH HHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH QSCAARGIELEGGRVASVVTEAGVIRTRTVVMAGGAWASSFCRQLGIRFPQASIRQSILS HHHHHCCCCCCCCCHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHH VAPVARPLPEAMYTSGVSATRRSDGRYALAISGRARVDPTPQFLRFAPQFVPMFAKRWRN HHHHHHHCHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLPGGLEGVRGGHETLKRWRLDAPTPMEAVRILDPKPDMPTVRETYRRAAELLPELGDAK HCCCCHHHCCCCHHHHHHHCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCE ITHAWAGFVDSTPDGVPGIGEVAGVPGLILAAGFSGHGFGIGPGAGHLIADLATGAPLLV EHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE DPLPYRPGRFNDAAWGKVADF CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8682785; 10984043; 8097014 [H]