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The map label for this gene is dppC [H]

Identifier: 238024442

GI number: 238024442

Start: 1325773

End: 1326726

Strand: Direct

Name: dppC [H]

Synonym: bglu_2g10380

Alternate gene names: 238024442

Gene position: 1325773-1326726 (Clockwise)

Preceding gene: 238024441

Following gene: 238024443

Centisome position: 46.89

GC content: 72.64

Gene sequence:

>954_bases
ATGCAACCGTTCGAACCCACTCGACGCGACAAGGCGCTGCCGCCTTCCGGCGACCGGCGCCCGCCGTGGCGCGGCGCGAC
GCCGCCCGCCGCGAGTTCCCCCGACCAGCCGCGCAGGCGCCGCGTGATGCGCCTCGGCCTGACGGCGGGCGGCCGCGTCG
GCCTGGCGATGGTGGGCCTGATGCTGGCCGTGGCGGTGTTCGGGCCGCTGCTCGCGCCGCACGACATCGGCACGCTCGTC
ACGAGCGACGTGTTCGCGCCGTTCAGCGCGAAGCTGCCGTTCGGCTCCGACTACCTCGGCCGCGACATGCTGAGCCGCAT
CCTGTACGGCACGCGGCTGACGGTGCTGCTGGCGCTGGCCGCGGTGCTGCTCGCCGCGCTGACCGGCACCACGCTCGGGC
TGCTCGCCACCGTGTCGGGCCGCGCGCTCGACGAAACCATGAGCCGGCTGCTCGACGCGCTCACCTCGATCCCGTCGAAG
ATGTTCGCGCTGATGTTCGTCGCGGCGTTCGGCTCGTCGCTGCCGCTGCTGGTGCTGACCGCCGCGGTCAGCTACATGCC
GGGCTCCTACCGGATCGCCCGCGCGCTGGCGGTGAACCTCAGCACGCTCGAGTTCGTGCAGGTCGCGCGGGCGCGCGGCG
AGAGCGCGCTGTACATCGCCTGCGTCGAGATGCTGCCGAACATGATCCACCCCATGCTGGCCGACACGGGGCTGCGCTTC
ACCTTCGTCGTGCTGCTGCTGAGCGGCCTGAGCTTCCTCGGGCTCGGCGTGCAGCCGCCGTATGCGGACCTCGGCTCGCT
GGTGCGCGAGAACATCGCGAGCCTGGGCGACGGCTCGGCCGTCGCGATCGTGCCCGCGGTCGCGATCGCGATCCTGACGG
TGGGCGTCAACCTGCTGATCGACGGCTTGCCGCATCGCGGCCGCCGCCGCGGCGCGGTCACGGGAGAACACTGA

Upstream 100 bases:

>100_bases
GGCCTACCTGATGCTCGTGCTGTTCGCCGATCTCTGCTCGATCGTGTCGAACCCGCGACTGCGCACCTGAGTGCTTCGTT
TTTCCTCCGAGACGCCTCCT

Downstream 100 bases:

>100_bases
TGCGCGATCAATCGACTCCGCTCGTCGAGGTGCGCGGCCTGCGCGTGGTCGGCGGCCGCCCCGGCGGCGCCGAAACCACC
ATCGTCCACGACCTGGACTT

Product: Binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MQPFEPTRRDKALPPSGDRRPPWRGATPPAASSPDQPRRRRVMRLGLTAGGRVGLAMVGLMLAVAVFGPLLAPHDIGTLV
TSDVFAPFSAKLPFGSDYLGRDMLSRILYGTRLTVLLALAAVLLAALTGTTLGLLATVSGRALDETMSRLLDALTSIPSK
MFALMFVAAFGSSLPLLVLTAAVSYMPGSYRIARALAVNLSTLEFVQVARARGESALYIACVEMLPNMIHPMLADTGLRF
TFVVLLLSGLSFLGLGVQPPYADLGSLVRENIASLGDGSAVAIVPAVAIAILTVGVNLLIDGLPHRGRRRGAVTGEH

Sequences:

>Translated_317_residues
MQPFEPTRRDKALPPSGDRRPPWRGATPPAASSPDQPRRRRVMRLGLTAGGRVGLAMVGLMLAVAVFGPLLAPHDIGTLV
TSDVFAPFSAKLPFGSDYLGRDMLSRILYGTRLTVLLALAAVLLAALTGTTLGLLATVSGRALDETMSRLLDALTSIPSK
MFALMFVAAFGSSLPLLVLTAAVSYMPGSYRIARALAVNLSTLEFVQVARARGESALYIACVEMLPNMIHPMLADTGLRF
TFVVLLLSGLSFLGLGVQPPYADLGSLVRENIASLGDGSAVAIVPAVAIAILTVGVNLLIDGLPHRGRRRGAVTGEH
>Mature_317_residues
MQPFEPTRRDKALPPSGDRRPPWRGATPPAASSPDQPRRRRVMRLGLTAGGRVGLAMVGLMLAVAVFGPLLAPHDIGTLV
TSDVFAPFSAKLPFGSDYLGRDMLSRILYGTRLTVLLALAAVLLAALTGTTLGLLATVSGRALDETMSRLLDALTSIPSK
MFALMFVAAFGSSLPLLVLTAAVSYMPGSYRIARALAVNLSTLEFVQVARARGESALYIACVEMLPNMIHPMLADTGLRF
TFVVLLLSGLSFLGLGVQPPYADLGSLVRENIASLGDGSAVAIVPAVAIAILTVGVNLLIDGLPHRGRRRGAVTGEH

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=247, Percent_Identity=32.7935222672065, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787054, Length=286, Percent_Identity=30.7692307692308, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1789964, Length=248, Percent_Identity=29.8387096774194, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787549, Length=271, Percent_Identity=30.2583025830258, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789889, Length=215, Percent_Identity=26.9767441860465, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=30, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33421; Mature: 33421

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPFEPTRRDKALPPSGDRRPPWRGATPPAASSPDQPRRRRVMRLGLTAGGRVGLAMVGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
MLAVAVFGPLLAPHDIGTLVTSDVFAPFSAKLPFGSDYLGRDMLSRILYGTRLTVLLALA
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVLLAALTGTTLGLLATVSGRALDETMSRLLDALTSIPSKMFALMFVAAFGSSLPLLVLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AAVSYMPGSYRIARALAVNLSTLEFVQVARARGESALYIACVEMLPNMIHPMLADTGLRF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
TFVVLLLSGLSFLGLGVQPPYADLGSLVRENIASLGDGSAVAIVPAVAIAILTVGVNLLI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DGLPHRGRRRGAVTGEH
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPFEPTRRDKALPPSGDRRPPWRGATPPAASSPDQPRRRRVMRLGLTAGGRVGLAMVGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
MLAVAVFGPLLAPHDIGTLVTSDVFAPFSAKLPFGSDYLGRDMLSRILYGTRLTVLLALA
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVLLAALTGTTLGLLATVSGRALDETMSRLLDALTSIPSKMFALMFVAAFGSSLPLLVLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AAVSYMPGSYRIARALAVNLSTLEFVQVARARGESALYIACVEMLPNMIHPMLADTGLRF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
TFVVLLLSGLSFLGLGVQPPYADLGSLVRENIASLGDGSAVAIVPAVAIAILTVGVNLLI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DGLPHRGRRRGAVTGEH
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]