| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cat1 [H]
Identifier: 238024411
GI number: 238024411
Start: 1280988
End: 1282502
Strand: Direct
Name: cat1 [H]
Synonym: bglu_2g10050
Alternate gene names: 238024411
Gene position: 1280988-1282502 (Clockwise)
Preceding gene: 238024410
Following gene: 238024415
Centisome position: 45.31
GC content: 68.12
Gene sequence:
>1515_bases ATGCCCACTTCCCGAATCCTCGCCGAATCCCTGCGTTCCCTCGTCCGTACCGCCGAAGAAGCGGCGGCCCTGATCGTGCC GAGCATGACCGTCGCCATGAGCGGCTTTACCGGCTCCGGCTATCCGAAGGCGGTGCCGGCCGCGCTGGCCGCGCGTATCT CGGCCGCCCACGCGCGCGGCGAGGACTTCCGGATCAACGTGCTGACGGGCGCCTCCACGGCGCCCGAGCTCGACGGCGCG CTCGCCAAGGCCGACGGCATCTCGATGCGCCTGCCGTACCAGTCCGATCCGGTCCTGCGCGACAAGATCAATGCGGGCAA GCTCGACTACCAGGACATCCACCTGAGCCACGTCGCGCAATACGCCTGGTTCGGCCTGTTCGGCGAACTCGACGTGGCCG TGGTGGAAGTGGCCGGCATTCGCGAGGACGGGCTGCTGATTCCGTCGGCCTCGGTCGGCAACAACAAGACCTGGCTGGAC CTGGCGAAGAAGGTGATCCTCGAGGTCAACTCGCGGCAGCCGCTCGGCCTCGACGGCATGCACGACATCTATTACGGCAC GGCGCTGCCGCCGCATCGCAAGCCGATTCCGCTGGTGTCTGCCGACGACCGCATCGGCGAGCCGTACCTGCGCTGCCCGG CCGACAAGATCATCGCGATCGTCGAGACCGACGCGCCCGATCGCAGCAACGCGTTCTCGGCTCCCGACGCCACCTCGAAG CAGATCGCCGGGCACCTGATCGAGTTCCTGCGCCACGAGATCGGCCGCGGCCGGCTGCCCGCCAACCTGCTGCCGCTGCA ATCGGGCGTCGGCAACATCACCAACGCGGTGCTGGCCGGGCTCGGCGAGGGCGGCTTCACGAACCTGACCGCCTATACCG AGGTGATCCAGGACGGCATGCTCGACCTGCTCGTGAACGGCACGCTGAGCTTCGCCTCGGCCACCGCGCTGTCGCTGAGC CCCGACGCCGTCAAGCGCTTCGCCGACGACATCGCGCTGTTCCGCAAGAAGATCCTGCTGCGCCCGCAGGAGATCAGCAA TCATCCGGAGCTGGTGCGCCGGCTCGGCTGCATCGCGATGAACGGCATGATCGAGGCCGACATCTACGGCAACGTGAATT CCACGCACGTGATGGGCACGAAGATCCAGAACGGCATCGGCGGCTCGGGCGACTTCGCGCGCAACGGCTACCTGTCGTGC TTCATGTCGGCGAGCACCGCGAAGGGCGGCACGATCTCGCGGATCGTGCCGATGGCGAGCCATGTCGATCACACCGAGCA CGACGTGGGCGTGGTGGTGACCGAGCAGGGCCTCGCGGACCTGCGCGGGCTGTCGCCGCGCCAGCGCGCGCGCAAGATCA TCGACACCTGCGCGCACCCGGACTACCGGCCGATGCTGGCCGACTACTTCGAGCGCGCCAGCCACGAGAGCTTCGGCAAG CAGACGCCGCATCTGCTCGGCGAGGCGCTGTCGTGGCACGACCGCTACGTGCGCACCGGCACGATGAAGCCGTGA
Upstream 100 bases:
>100_bases GACCCGGTCCGCGGTTGCGAACCGTCGGGTCACGCGCCGCTTCCGAGACACCTGCCGCGGCGCCCACGACGACCTATCAC GACCCGTTCGAGCTCTCGCC
Downstream 100 bases:
>100_bases CGCGGCGGCCGGGGCGCCTGCGCTGCCCGGCTGCCCCGTAGCCCCGTAGCCCGATATGCACGAGACCACGGCGGCCGCCG GCCACTTCAGGAAGCGCTGG
Product: Coenzyme A transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MPTSRILAESLRSLVRTAEEAAALIVPSMTVAMSGFTGSGYPKAVPAALAARISAAHARGEDFRINVLTGASTAPELDGA LAKADGISMRLPYQSDPVLRDKINAGKLDYQDIHLSHVAQYAWFGLFGELDVAVVEVAGIREDGLLIPSASVGNNKTWLD LAKKVILEVNSRQPLGLDGMHDIYYGTALPPHRKPIPLVSADDRIGEPYLRCPADKIIAIVETDAPDRSNAFSAPDATSK QIAGHLIEFLRHEIGRGRLPANLLPLQSGVGNITNAVLAGLGEGGFTNLTAYTEVIQDGMLDLLVNGTLSFASATALSLS PDAVKRFADDIALFRKKILLRPQEISNHPELVRRLGCIAMNGMIEADIYGNVNSTHVMGTKIQNGIGGSGDFARNGYLSC FMSASTAKGGTISRIVPMASHVDHTEHDVGVVVTEQGLADLRGLSPRQRARKIIDTCAHPDYRPMLADYFERASHESFGK QTPHLLGEALSWHDRYVRTGTMKP
Sequences:
>Translated_504_residues MPTSRILAESLRSLVRTAEEAAALIVPSMTVAMSGFTGSGYPKAVPAALAARISAAHARGEDFRINVLTGASTAPELDGA LAKADGISMRLPYQSDPVLRDKINAGKLDYQDIHLSHVAQYAWFGLFGELDVAVVEVAGIREDGLLIPSASVGNNKTWLD LAKKVILEVNSRQPLGLDGMHDIYYGTALPPHRKPIPLVSADDRIGEPYLRCPADKIIAIVETDAPDRSNAFSAPDATSK QIAGHLIEFLRHEIGRGRLPANLLPLQSGVGNITNAVLAGLGEGGFTNLTAYTEVIQDGMLDLLVNGTLSFASATALSLS PDAVKRFADDIALFRKKILLRPQEISNHPELVRRLGCIAMNGMIEADIYGNVNSTHVMGTKIQNGIGGSGDFARNGYLSC FMSASTAKGGTISRIVPMASHVDHTEHDVGVVVTEQGLADLRGLSPRQRARKIIDTCAHPDYRPMLADYFERASHESFGK QTPHLLGEALSWHDRYVRTGTMKP >Mature_503_residues PTSRILAESLRSLVRTAEEAAALIVPSMTVAMSGFTGSGYPKAVPAALAARISAAHARGEDFRINVLTGASTAPELDGAL AKADGISMRLPYQSDPVLRDKINAGKLDYQDIHLSHVAQYAWFGLFGELDVAVVEVAGIREDGLLIPSASVGNNKTWLDL AKKVILEVNSRQPLGLDGMHDIYYGTALPPHRKPIPLVSADDRIGEPYLRCPADKIIAIVETDAPDRSNAFSAPDATSKQ IAGHLIEFLRHEIGRGRLPANLLPLQSGVGNITNAVLAGLGEGGFTNLTAYTEVIQDGMLDLLVNGTLSFASATALSLSP DAVKRFADDIALFRKKILLRPQEISNHPELVRRLGCIAMNGMIEADIYGNVNSTHVMGTKIQNGIGGSGDFARNGYLSCF MSASTAKGGTISRIVPMASHVDHTEHDVGVVVTEQGLADLRGLSPRQRARKIIDTCAHPDYRPMLADYFERASHESFGKQ TPHLLGEALSWHDRYVRTGTMKP
Specific function: Forms succinyl-CoA from succinate and acetyl-CoA [H]
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=487, Percent_Identity=47.6386036960986, Blast_Score=444, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17538151, Length=485, Percent_Identity=25.979381443299, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319456, Length=525, Percent_Identity=42.8571428571429, Blast_Score=410, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 - InterPro: IPR006472 - InterPro: IPR017821 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro; PF04223 CitF [H]
EC number: NA
Molecular weight: Translated: 54213; Mature: 54081
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSRILAESLRSLVRTAEEAAALIVPSMTVAMSGFTGSGYPKAVPAALAARISAAHARG CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCC EDFRINVLTGASTAPELDGALAKADGISMRLPYQSDPVLRDKINAGKLDYQDIHLSHVAQ CCEEEEEEECCCCCCCCCCHHHHCCCCEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHH YAWFGLFGELDVAVVEVAGIREDGLLIPSASVGNNKTWLDLAKKVILEVNSRQPLGLDGM HHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC HDIYYGTALPPHRKPIPLVSADDRIGEPYLRCPADKIIAIVETDAPDRSNAFSAPDATSK HHHHCCCCCCCCCCCCCEECCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH QIAGHLIEFLRHEIGRGRLPANLLPLQSGVGNITNAVLAGLGEGGFTNLTAYTEVIQDGM HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LDLLVNGTLSFASATALSLSPDAVKRFADDIALFRKKILLRPQEISNHPELVRRLGCIAM HHHHHCCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHH NGMIEADIYGNVNSTHVMGTKIQNGIGGSGDFARNGYLSCFMSASTAKGGTISRIVPMAS CCEEEEEEECCCCCCEEECCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH HVDHTEHDVGVVVTEQGLADLRGLSPRQRARKIIDTCAHPDYRPMLADYFERASHESFGK HCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC QTPHLLGEALSWHDRYVRTGTMKP CCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PTSRILAESLRSLVRTAEEAAALIVPSMTVAMSGFTGSGYPKAVPAALAARISAAHARG CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCC EDFRINVLTGASTAPELDGALAKADGISMRLPYQSDPVLRDKINAGKLDYQDIHLSHVAQ CCEEEEEEECCCCCCCCCCHHHHCCCCEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHH YAWFGLFGELDVAVVEVAGIREDGLLIPSASVGNNKTWLDLAKKVILEVNSRQPLGLDGM HHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC HDIYYGTALPPHRKPIPLVSADDRIGEPYLRCPADKIIAIVETDAPDRSNAFSAPDATSK HHHHCCCCCCCCCCCCCEECCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH QIAGHLIEFLRHEIGRGRLPANLLPLQSGVGNITNAVLAGLGEGGFTNLTAYTEVIQDGM HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LDLLVNGTLSFASATALSLSPDAVKRFADDIALFRKKILLRPQEISNHPELVRRLGCIAM HHHHHCCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHH NGMIEADIYGNVNSTHVMGTKIQNGIGGSGDFARNGYLSCFMSASTAKGGTISRIVPMAS CCEEEEEEECCCCCCEEECCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH HVDHTEHDVGVVVTEQGLADLRGLSPRQRARKIIDTCAHPDYRPMLADYFERASHESFGK HCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC QTPHLLGEALSWHDRYVRTGTMKP CCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]