| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024393
Identifier: 238024393
GI number: 238024393
Start: 1240386
End: 1241213
Strand: Reverse
Name: 238024393
Synonym: bglu_2g09860
Alternate gene names: NA
Gene position: 1241213-1240386 (Counterclockwise)
Preceding gene: 238024394
Following gene: 238024392
Centisome position: 43.9
GC content: 64.86
Gene sequence:
>828_bases GTGAATCAGGAAATCGAAATTCCCATTCGCGATACGCTCGACGCACTCGAGGCCGAATACGGCAAGCCGGCGCTGGCGCG CGTGTTCGAATTCGTGGGAATCAACACCGGACAGCTTGCGCTGCCCGAACTGCCGCCCTACCAGCGGCCCCAACTGTTCT ATTTCCCCGGCCTCGACGGTAAGCCCTGGTACGAGGCGAGCGATTACGAAGAACTGCGGGCCTTCACCTCGATCCTCGAG GCCGAGATCGACATGCTGCGCGACGAGTATCTCGCCCAGGTGAGGCCCTCGATGCTGCTTCCATACGAGGAGCAGGTTGC CGGCCGATTCGATCATATCGGCCGGGCCGATTGGGGGACCTTCGATTTCCGGCGCAAGAGCCAACGCGAGGTCGAGGAAA ACTGCCGGCGCTGCCCAGGCACCGCCGCCCTCATGCATCGGGTGGAGACCTACCTCAATCCGGGTGGTGCGTTCATCTTC TCGGTGATCCAGGGCGGCACGAAAATCCCGCCGCATTCCGATTCAACCAACATCAAGCTGACCTGCCAGCTTCCGCTGCT GGTACCGCCTGGCTCGCGGCTCCGAGTCGGTGCCGAGACCCGCGGCTGGCCCGAAGGGCGCGCGATCCTGTTCGACGATA CCTTCGAGCACGAGAGCTGGAACGACAGCGATCAGCCGCGCGTCTGCCTGCTCGTCGATATCTGGCACCCCGGGCTGACG CAGGCCGAGCGGGCCGCCATCACACGCCTGCATGCGGTAATCGCGCAACACGCCGGCCCGGCGTTCACGCCGCCCTGGGC AACGGGCGTCGCACCCGCGCGAAGCTAG
Upstream 100 bases:
>100_bases GCAACTGGTCGACCGAGCCCGCCAGCGATATCGCCGCGCAAAGGCTATTGACCGCCGCGCCGTCCCCATCCTTTCACCAG TCACATCCAGGAGAACCGGA
Downstream 100 bases:
>100_bases TCGGCGCGAGCGGGAACGCCTGCCGCGCGAGCGCCGCGGCAGGCGGCGCGCTGGCCGCCCGCCACTTCGGCGTGGGCGAT TTCTCGGCCTCGAACGGCGC
Product: beta-hydroxylase, aspartyl/asparaginyl family
Products: NA
Alternate protein names: Beta-Hydroxylase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Peptide-Aspartate Beta-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Beta-Hydroxylase Aspartyl/Asparaginyl Family Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNQEIEIPIRDTLDALEAEYGKPALARVFEFVGINTGQLALPELPPYQRPQLFYFPGLDGKPWYEASDYEELRAFTSILE AEIDMLRDEYLAQVRPSMLLPYEEQVAGRFDHIGRADWGTFDFRRKSQREVEENCRRCPGTAALMHRVETYLNPGGAFIF SVIQGGTKIPPHSDSTNIKLTCQLPLLVPPGSRLRVGAETRGWPEGRAILFDDTFEHESWNDSDQPRVCLLVDIWHPGLT QAERAAITRLHAVIAQHAGPAFTPPWATGVAPARS
Sequences:
>Translated_275_residues MNQEIEIPIRDTLDALEAEYGKPALARVFEFVGINTGQLALPELPPYQRPQLFYFPGLDGKPWYEASDYEELRAFTSILE AEIDMLRDEYLAQVRPSMLLPYEEQVAGRFDHIGRADWGTFDFRRKSQREVEENCRRCPGTAALMHRVETYLNPGGAFIF SVIQGGTKIPPHSDSTNIKLTCQLPLLVPPGSRLRVGAETRGWPEGRAILFDDTFEHESWNDSDQPRVCLLVDIWHPGLT QAERAAITRLHAVIAQHAGPAFTPPWATGVAPARS >Mature_275_residues MNQEIEIPIRDTLDALEAEYGKPALARVFEFVGINTGQLALPELPPYQRPQLFYFPGLDGKPWYEASDYEELRAFTSILE AEIDMLRDEYLAQVRPSMLLPYEEQVAGRFDHIGRADWGTFDFRRKSQREVEENCRRCPGTAALMHRVETYLNPGGAFIF SVIQGGTKIPPHSDSTNIKLTCQLPLLVPPGSRLRVGAETRGWPEGRAILFDDTFEHESWNDSDQPRVCLLVDIWHPGLT QAERAAITRLHAVIAQHAGPAFTPPWATGVAPARS
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194328779, Length=261, Percent_Identity=30.6513409961686, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI14589866, Length=202, Percent_Identity=32.6732673267327, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI258613943, Length=202, Percent_Identity=32.6732673267327, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI38708313, Length=132, Percent_Identity=36.3636363636364, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193210573, Length=203, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193210571, Length=203, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17568771, Length=203, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654024, Length=208, Percent_Identity=33.1730769230769, Blast_Score=101, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30969; Mature: 30969
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQEIEIPIRDTLDALEAEYGKPALARVFEFVGINTGQLALPELPPYQRPQLFYFPGLDG CCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEECCCCC KPWYEASDYEELRAFTSILEAEIDMLRDEYLAQVRPSMLLPYEEQVAGRFDHIGRADWGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCCC FDFRRKSQREVEENCRRCPGTAALMHRVETYLNPGGAFIFSVIQGGTKIPPHSDSTNIKL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEE TCQLPLLVPPGSRLRVGAETRGWPEGRAILFDDTFEHESWNDSDQPRVCLLVDIWHPGLT EEEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCC QAERAAITRLHAVIAQHAGPAFTPPWATGVAPARS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQEIEIPIRDTLDALEAEYGKPALARVFEFVGINTGQLALPELPPYQRPQLFYFPGLDG CCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEECCCCC KPWYEASDYEELRAFTSILEAEIDMLRDEYLAQVRPSMLLPYEEQVAGRFDHIGRADWGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCCC FDFRRKSQREVEENCRRCPGTAALMHRVETYLNPGGAFIFSVIQGGTKIPPHSDSTNIKL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEE TCQLPLLVPPGSRLRVGAETRGWPEGRAILFDDTFEHESWNDSDQPRVCLLVDIWHPGLT EEEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCC QAERAAITRLHAVIAQHAGPAFTPPWATGVAPARS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA