| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024392
Identifier: 238024392
GI number: 238024392
Start: 1239012
End: 1239443
Strand: Reverse
Name: 238024392
Synonym: bglu_2g09850
Alternate gene names: NA
Gene position: 1239443-1239012 (Counterclockwise)
Preceding gene: 238024393
Following gene: 238024378
Centisome position: 43.84
GC content: 66.2
Gene sequence:
>432_bases ATGGGGCACATCATGTCGGAATTCCACCCGTTCAATCACGCCGGCACCTTCTCGATCGGCACGCCGAATCTGGCCGGCGG CCGGCGGCTGCAAGTGTTTCTCTCGGTGCCGCAAGGGACCAACAGCGTGTCCGGCTACGGCACGCTGACGCAGGCGACCA ATCCGCCGCTGCACATCGAATCCGCATTCCATGGCTCCGTATATTCGCTGGGCCTGGCCAGCGGCCAGCAGGTCTACGCA TTGCAGGGCACGGCCGTGCCGGCGATCCCGGGCGCGCCGCACGTGACGGAACTGGTGATCACGCTCGACAGCACCTGGAG CAAGACCGGCAAGGCTGCCTACAAGTACGTGGTCGGCAGCCAGTTCGAGGAAGCCACGGACCAGCCCGTCACGGTCCAGT GGCTGCTGCAGAACGGCGAGCGCGCGGCCTGA
Upstream 100 bases:
>100_bases TTATCGATGGATTTTATAAAATCCCCATGCTATTTTTTTCACCATCCTCAATAACAAGAGGATGCCGAAACAAAATGATA GCCATTTCTAACCACTTAAT
Downstream 100 bases:
>100_bases GGCAGCGTCGTCACGCCGGCGTGACGGCCGGCTGATTGGGCCGTCGCGGCATGAGGAAACACTCGCCCGATCCCTCGGAT CGGGCGAGTGTCGTCGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGHIMSEFHPFNHAGTFSIGTPNLAGGRRLQVFLSVPQGTNSVSGYGTLTQATNPPLHIESAFHGSVYSLGLASGQQVYA LQGTAVPAIPGAPHVTELVITLDSTWSKTGKAAYKYVVGSQFEEATDQPVTVQWLLQNGERAA
Sequences:
>Translated_143_residues MGHIMSEFHPFNHAGTFSIGTPNLAGGRRLQVFLSVPQGTNSVSGYGTLTQATNPPLHIESAFHGSVYSLGLASGQQVYA LQGTAVPAIPGAPHVTELVITLDSTWSKTGKAAYKYVVGSQFEEATDQPVTVQWLLQNGERAA >Mature_142_residues GHIMSEFHPFNHAGTFSIGTPNLAGGRRLQVFLSVPQGTNSVSGYGTLTQATNPPLHIESAFHGSVYSLGLASGQQVYAL QGTAVPAIPGAPHVTELVITLDSTWSKTGKAAYKYVVGSQFEEATDQPVTVQWLLQNGERAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15139; Mature: 15008
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHIMSEFHPFNHAGTFSIGTPNLAGGRRLQVFLSVPQGTNSVSGYGTLTQATNPPLHIE CCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEE SAFHGSVYSLGLASGQQVYALQGTAVPAIPGAPHVTELVITLDSTWSKTGKAAYKYVVGS CCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCC QFEEATDQPVTVQWLLQNGERAA CCHHHCCCCEEEEEEECCCCCCC >Mature Secondary Structure GHIMSEFHPFNHAGTFSIGTPNLAGGRRLQVFLSVPQGTNSVSGYGTLTQATNPPLHIE CCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEEE SAFHGSVYSLGLASGQQVYALQGTAVPAIPGAPHVTELVITLDSTWSKTGKAAYKYVVGS CCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCC QFEEATDQPVTVQWLLQNGERAA CCHHHCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA