| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fhuB [H]
Identifier: 238024386
GI number: 238024386
Start: 1214477
End: 1216489
Strand: Direct
Name: fhuB [H]
Synonym: bglu_2g09790
Alternate gene names: 238024386
Gene position: 1214477-1216489 (Clockwise)
Preceding gene: 238024385
Following gene: 238024387
Centisome position: 42.95
GC content: 74.12
Gene sequence:
>2013_bases ATGGCCTTGCCCCGTCACGCCGCGCCGCGCGAGTTCCGCTGGTGGCTGGTGGGCGCGCTGCTGGCCGTCTCGCTGCTGCT CGCGGCGCTCGGCATCCGCGCCGAGCTCGACGGCGCGCCGTTCTGGCAGGCGCTGTTGGCGCCCGATCCGCGCGACCTGC ACCAGATCCTGGTGCGCGACAGCATGCTGCCGCGCATCGCGATGACGCTGCTCTGCGGCGGCGCGCTCGCGCTGGCCGGC ACGCTCGCGCAGCAGGTGCTGCGCAATCCGCTCGCCGAGCCGATGACGCTCGGCGTGTTTCCCGGCGCCTATCTCGCGCT GGTGCTCGCCGATCTGTGGGCGCCGTCGTGGCTCGCGCTGGGCCGCCCCGCGGTCGCGCTGGCGGGCGGCACCGTCGCGA TGCTGATCGTGTTCGCGCTGTCCGCGCGGCAGAAGATGGCGCCGCTCGCGGTGGTGCTGTCGGGCATGATCGTCAACCTC TACTGCGGGGCGATCTGCCTCGCGCTGTCGATGGCGCACTTCGAGCTGCTGCGCGGCCTGATGATCTGGGGCGGCGGCGC GCTCGACCAGACCGGCTGGCACGAGAGCCGGATGCTCGCGCTGGCGGTGCTCGGCTGCGCGCTCGTCACCGCGCTGCTGC GGCGTCCGCTCGGCGTGTTCGACGCCGGCGACGCGACGGTGCGCAGCCTCGGCGTGGGCCTGCATCGCACGCGCGTCGCG GCGCTGCTGGTCTCGGTGGTGCTGACCGCGGCGGTGGTCTCCACGGTCGGCGTGATCGGCTTCGTCGGGCTGGCCGCGCC CACGCTCGCGCGGCTCGCCGGCGCGCGCCGCATCGGCCAGCGCCTGATCTGGGCGCCGTGCCTCGGCGCCGCGCTGCTGT GGCTGACCGACGAGCTGGTGCGCGTGGCCTCGTCGGCCGAACTGTTCTCGGCGCACCTGATTCCCACCGGCACCGTCACC TCGCTGGTGGGCGTGCCGCTGTTGCTGCTGCTGCTGCCCAAGCTGCGCGCGCAGCCGGACCTGCACGCGGCCGGCATCGC CGCCGGCCCGCCCGCGCGGCTCGCGCGCCGGCTGCCGGTCGCGCTCGTCGCGCTGGTGCTGGTGATGGGGCTGAGCTTCG GCGTCACGCGCACGCTCGACGGCTGGCGCATCGGCGATCTCGAGCAGATGCGCGCGATCCTGTTCTGGCGCGCGCCGCAC ACCATCGCGGCGGCCGCGGCCGGCGTGCTGCTGGCGATCGGCGGCACGCTGATCCAGCGCATCACCGCCAACCCGATGGC GAGCCCGGACCTGCTCGGCGTCAGCTCGGGCGGCATGCTCGGCATCGTGGCGGTGCTGTTCGCCGGCGTGCTGCCGAGCC CGGGCGTGCTGTTCGCGAGCTGCCTGGGCGGCGTGATCGTCACGCTCGCGCTGCTGATGTGGCTCGGCTCGCGGGCCGCG TTCGCGCCGGAGCGGCTGCTGCTGATCGGCGTGGCGATCAGCGCGCTGCTGCAGGCGATCGTCAGCGCGATGATGTCGAG CGGCGACTCGCGCGTCGGAATGGTGCTGAACTTCATCGTCGGCTCGACCTACTACGTGCAGGCGCCGATCGCCTATGGCG CCACCGTGATCGCGCTGCTCGGCCTGGCTGGCGCGCCGCTGCTGAGCCGCTGGGTCGAGGCGCTCGGGCTCGGTGCCGGC GTGGCGGGCGGCCTCGGCGTGCCGGTCGCCCGCGCCCGCGTGACGATCCTGCTGCTCGCCTCGGTGCTGACGGCCGCCTC GACCATGCTGGTCGGCCCGCTGTCGTTCGTCGGCCTGATCGCGCCGCATATCGCGCGCTTCTCCGGCGCGCGCCGGCCGG CTTCGCAGATCCTCGTCGCGGCCGTGATCGGCGCCTTGCTGATGACCTTCGCCGAGTGGCTCGGCCGCCAGCTGGTGTTC CCGGAGGAGGTCGCCTCGGGGCTCGTCGCCACGCTGATCGGCGGCCCGTATCTGATCGCGCTGATGCTGCGCAAGACGCT CACCTCCACCTGA
Upstream 100 bases:
>100_bases GCGCCTTACGGAGGACTGGTATCGATGCAACGCTTCGCCGGGGCGATCGAGGCGGCGCTGACGGCGATCGACGCGGGAGG GGGCGGTGTTGCGTAATCCC
Downstream 100 bases:
>100_bases GCGGCCCGCCGCCGCGCCGCCGCCGCGTCCGCGCGCGGCGGGGCGGGGCGCGCGGCGCCGCCGGTCGGCGCGGCCGCTTC CGGCGCGGCCCGCCGCGCGT
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 670; Mature: 669
Protein sequence:
>670_residues MALPRHAAPREFRWWLVGALLAVSLLLAALGIRAELDGAPFWQALLAPDPRDLHQILVRDSMLPRIAMTLLCGGALALAG TLAQQVLRNPLAEPMTLGVFPGAYLALVLADLWAPSWLALGRPAVALAGGTVAMLIVFALSARQKMAPLAVVLSGMIVNL YCGAICLALSMAHFELLRGLMIWGGGALDQTGWHESRMLALAVLGCALVTALLRRPLGVFDAGDATVRSLGVGLHRTRVA ALLVSVVLTAAVVSTVGVIGFVGLAAPTLARLAGARRIGQRLIWAPCLGAALLWLTDELVRVASSAELFSAHLIPTGTVT SLVGVPLLLLLLPKLRAQPDLHAAGIAAGPPARLARRLPVALVALVLVMGLSFGVTRTLDGWRIGDLEQMRAILFWRAPH TIAAAAAGVLLAIGGTLIQRITANPMASPDLLGVSSGGMLGIVAVLFAGVLPSPGVLFASCLGGVIVTLALLMWLGSRAA FAPERLLLIGVAISALLQAIVSAMMSSGDSRVGMVLNFIVGSTYYVQAPIAYGATVIALLGLAGAPLLSRWVEALGLGAG VAGGLGVPVARARVTILLLASVLTAASTMLVGPLSFVGLIAPHIARFSGARRPASQILVAAVIGALLMTFAEWLGRQLVF PEEVASGLVATLIGGPYLIALMLRKTLTST
Sequences:
>Translated_670_residues MALPRHAAPREFRWWLVGALLAVSLLLAALGIRAELDGAPFWQALLAPDPRDLHQILVRDSMLPRIAMTLLCGGALALAG TLAQQVLRNPLAEPMTLGVFPGAYLALVLADLWAPSWLALGRPAVALAGGTVAMLIVFALSARQKMAPLAVVLSGMIVNL YCGAICLALSMAHFELLRGLMIWGGGALDQTGWHESRMLALAVLGCALVTALLRRPLGVFDAGDATVRSLGVGLHRTRVA ALLVSVVLTAAVVSTVGVIGFVGLAAPTLARLAGARRIGQRLIWAPCLGAALLWLTDELVRVASSAELFSAHLIPTGTVT SLVGVPLLLLLLPKLRAQPDLHAAGIAAGPPARLARRLPVALVALVLVMGLSFGVTRTLDGWRIGDLEQMRAILFWRAPH TIAAAAAGVLLAIGGTLIQRITANPMASPDLLGVSSGGMLGIVAVLFAGVLPSPGVLFASCLGGVIVTLALLMWLGSRAA FAPERLLLIGVAISALLQAIVSAMMSSGDSRVGMVLNFIVGSTYYVQAPIAYGATVIALLGLAGAPLLSRWVEALGLGAG VAGGLGVPVARARVTILLLASVLTAASTMLVGPLSFVGLIAPHIARFSGARRPASQILVAAVIGALLMTFAEWLGRQLVF PEEVASGLVATLIGGPYLIALMLRKTLTST >Mature_669_residues ALPRHAAPREFRWWLVGALLAVSLLLAALGIRAELDGAPFWQALLAPDPRDLHQILVRDSMLPRIAMTLLCGGALALAGT LAQQVLRNPLAEPMTLGVFPGAYLALVLADLWAPSWLALGRPAVALAGGTVAMLIVFALSARQKMAPLAVVLSGMIVNLY CGAICLALSMAHFELLRGLMIWGGGALDQTGWHESRMLALAVLGCALVTALLRRPLGVFDAGDATVRSLGVGLHRTRVAA LLVSVVLTAAVVSTVGVIGFVGLAAPTLARLAGARRIGQRLIWAPCLGAALLWLTDELVRVASSAELFSAHLIPTGTVTS LVGVPLLLLLLPKLRAQPDLHAAGIAAGPPARLARRLPVALVALVLVMGLSFGVTRTLDGWRIGDLEQMRAILFWRAPHT IAAAAAGVLLAIGGTLIQRITANPMASPDLLGVSSGGMLGIVAVLFAGVLPSPGVLFASCLGGVIVTLALLMWLGSRAAF APERLLLIGVAISALLQAIVSAMMSSGDSRVGMVLNFIVGSTYYVQAPIAYGATVIALLGLAGAPLLSRWVEALGLGAGV AGGLGVPVARARVTILLLASVLTAASTMLVGPLSFVGLIAPHIARFSGARRPASQILVAAVIGALLMTFAEWLGRQLVFP EEVASGLVATLIGGPYLIALMLRKTLTST
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=629, Percent_Identity=41.1764705882353, Blast_Score=352, Evalue=5e-98, Organism=Escherichia coli, GI1790741, Length=274, Percent_Identity=30.6569343065693, Blast_Score=103, Evalue=5e-23, Organism=Escherichia coli, GI1790740, Length=292, Percent_Identity=32.1917808219178, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1786805, Length=278, Percent_Identity=33.8129496402878, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786804, Length=281, Percent_Identity=32.3843416370107, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1788004, Length=225, Percent_Identity=32, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 69287; Mature: 69156
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPRHAAPREFRWWLVGALLAVSLLLAALGIRAELDGAPFWQALLAPDPRDLHQILVRD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHCCCHHHHHHHHHHH SMLPRIAMTLLCGGALALAGTLAQQVLRNPLAEPMTLGVFPGAYLALVLADLWAPSWLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHC GRPAVALAGGTVAMLIVFALSARQKMAPLAVVLSGMIVNLYCGAICLALSMAHFELLRGL CCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIWGGGALDQTGWHESRMLALAVLGCALVTALLRRPLGVFDAGDATVRSLGVGLHRTRVA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHH ALLVSVVLTAAVVSTVGVIGFVGLAAPTLARLAGARRIGQRLIWAPCLGAALLWLTDELV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVASSAELFSAHLIPTGTVTSLVGVPLLLLLLPKLRAQPDLHAAGIAAGPPARLARRLPV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH ALVALVLVMGLSFGVTRTLDGWRIGDLEQMRAILFWRAPHTIAAAAAGVLLAIGGTLIQR HHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ITANPMASPDLLGVSSGGMLGIVAVLFAGVLPSPGVLFASCLGGVIVTLALLMWLGSRAA HHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC FAPERLLLIGVAISALLQAIVSAMMSSGDSRVGMVLNFIVGSTYYVQAPIAYGATVIALL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHH GLAGAPLLSRWVEALGLGAGVAGGLGVPVARARVTILLLASVLTAASTMLVGPLSFVGLI HHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APHIARFSGARRPASQILVAAVIGALLMTFAEWLGRQLVFPEEVASGLVATLIGGPYLIA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHH LMLRKTLTST HHHHHHHCCC >Mature Secondary Structure ALPRHAAPREFRWWLVGALLAVSLLLAALGIRAELDGAPFWQALLAPDPRDLHQILVRD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHCCCHHHHHHHHHHH SMLPRIAMTLLCGGALALAGTLAQQVLRNPLAEPMTLGVFPGAYLALVLADLWAPSWLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHC GRPAVALAGGTVAMLIVFALSARQKMAPLAVVLSGMIVNLYCGAICLALSMAHFELLRGL CCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIWGGGALDQTGWHESRMLALAVLGCALVTALLRRPLGVFDAGDATVRSLGVGLHRTRVA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHH ALLVSVVLTAAVVSTVGVIGFVGLAAPTLARLAGARRIGQRLIWAPCLGAALLWLTDELV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVASSAELFSAHLIPTGTVTSLVGVPLLLLLLPKLRAQPDLHAAGIAAGPPARLARRLPV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH ALVALVLVMGLSFGVTRTLDGWRIGDLEQMRAILFWRAPHTIAAAAAGVLLAIGGTLIQR HHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ITANPMASPDLLGVSSGGMLGIVAVLFAGVLPSPGVLFASCLGGVIVTLALLMWLGSRAA HHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC FAPERLLLIGVAISALLQAIVSAMMSSGDSRVGMVLNFIVGSTYYVQAPIAYGATVIALL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHH GLAGAPLLSRWVEALGLGAGVAGGLGVPVARARVTILLLASVLTAASTMLVGPLSFVGLI HHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APHIARFSGARRPASQILVAAVIGALLMTFAEWLGRQLVFPEEVASGLVATLIGGPYLIA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHH LMLRKTLTST HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]