| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cynS [H]
Identifier: 238024374
GI number: 238024374
Start: 1188964
End: 1189434
Strand: Reverse
Name: cynS [H]
Synonym: bglu_2g09670
Alternate gene names: 238024374
Gene position: 1189434-1188964 (Counterclockwise)
Preceding gene: 238024376
Following gene: 238024373
Centisome position: 42.07
GC content: 68.37
Gene sequence:
>471_bases ATGACGCAATCGCAGCACAGCCAGACCGCCCGCCAAGCCCTGACCGACGCGATCATCGACGCGAAGCTCCGCCACGACCT GACCTTCGAGCAGCTCAGCGAAGGCACCGGCCTGAGCGTGGCCTTCGTCACCGCCGCGCTGCTGGGCCAGCACCCGCTGC CGGCCGAGGCTGCCCGGCTGGTGGCCGGCAGGCTCGACCTCGGCGAGGATGCCGTGCGCCTGCTGCAGACGATCCCCGTG CGCGGCAGCATCCCCGGCGGCGTGCCGACCGATCCCACCATCTACCGCTTCTACGAGATCGTGCAGGTATACGGCTCGAC GCTGAAGGCGCTGATCCACGAGCAGTTCGGCGACGGCATCATCAGCGCGATCGACTTCAGGCTCGATGTGAAGAAGGTGG ATGATCCCGAGGGCGGCTCGCGCGCGGTGATCACGCTGGACGGCAAGTACCTGCCCGCCAGGCCGTTCTGA
Upstream 100 bases:
>100_bases CGCCGTGCCGTGCGAGCGCGCGGCCGCCCGCCGCCGCGCGGGCGGTTCCTTGCATGCCGGGACCGCCGGCTGGTCCCCGC CCTTTCCCGAGGAGTTCCCC
Downstream 100 bases:
>100_bases GCGGCCGGCGAGCGCCGTGCCGCGCGCCGCCGCGGGCGCGAAAGATGCGAGGGCCGCGCCCCGGCCGACTGCGGCGGCAC CGCGAACGGCGGCCGTGCAT
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTQSQHSQTARQALTDAIIDAKLRHDLTFEQLSEGTGLSVAFVTAALLGQHPLPAEAARLVAGRLDLGEDAVRLLQTIPV RGSIPGGVPTDPTIYRFYEIVQVYGSTLKALIHEQFGDGIISAIDFRLDVKKVDDPEGGSRAVITLDGKYLPARPF
Sequences:
>Translated_156_residues MTQSQHSQTARQALTDAIIDAKLRHDLTFEQLSEGTGLSVAFVTAALLGQHPLPAEAARLVAGRLDLGEDAVRLLQTIPV RGSIPGGVPTDPTIYRFYEIVQVYGSTLKALIHEQFGDGIISAIDFRLDVKKVDDPEGGSRAVITLDGKYLPARPF >Mature_155_residues TQSQHSQTARQALTDAIIDAKLRHDLTFEQLSEGTGLSVAFVTAALLGQHPLPAEAARLVAGRLDLGEDAVRLLQTIPVR GSIPGGVPTDPTIYRFYEIVQVYGSTLKALIHEQFGDGIISAIDFRLDVKKVDDPEGGSRAVITLDGKYLPARPF
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide [H]
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family [H]
Homologues:
Organism=Escherichia coli, GI1786535, Length=156, Percent_Identity=66.6666666666667, Blast_Score=219, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 [H]
Pfam domain/function: PF02560 Cyanate_lyase [H]
EC number: =4.2.1.104 [H]
Molecular weight: Translated: 16865; Mature: 16734
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSQHSQTARQALTDAIIDAKLRHDLTFEQLSEGTGLSVAFVTAALLGQHPLPAEAARL CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH VAGRLDLGEDAVRLLQTIPVRGSIPGGVPTDPTIYRFYEIVQVYGSTLKALIHEQFGDGI HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH ISAIDFRLDVKKVDDPEGGSRAVITLDGKYLPARPF HHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure TQSQHSQTARQALTDAIIDAKLRHDLTFEQLSEGTGLSVAFVTAALLGQHPLPAEAARL CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH VAGRLDLGEDAVRLLQTIPVRGSIPGGVPTDPTIYRFYEIVQVYGSTLKALIHEQFGDGI HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH ISAIDFRLDVKKVDDPEGGSRAVITLDGKYLPARPF HHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA