| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is artJ [H]
Identifier: 238024354
GI number: 238024354
Start: 1166939
End: 1167745
Strand: Direct
Name: artJ [H]
Synonym: bglu_2g09470
Alternate gene names: 238024354
Gene position: 1166939-1167745 (Clockwise)
Preceding gene: 238024353
Following gene: 238024355
Centisome position: 41.27
GC content: 59.11
Gene sequence:
>807_bases ATGTTCCAACCTACGCCGCACCGTGCTTCGGGCAAGCACGCCAGTTTCTTCCAGCGCATTCTCGTCACCGCTGCCTTGGC GGTCGCCGCCGCGTTGGGAGCCAGCCCGGCATGGGCAGCGCAACTGACGGTTTCCGCCGGAACCACGCCGTCCAGCATTC CCAACGCCTTCTTGAACATCAAGACCAATCAGATCGAAGGCGTCATGCCGGACGTCATCCGCGCAATCGGGCAGCGTGAG GGGTTCGGCGTTTCATTCAACGTCATTCCCTACTCCGCCTTGATCCAGTCGGTCGTCTCCGACAAGATCGACCTGATCGT GGCCGGAATGACGCCGACGTCGAGGCGGGAAGAGGTGATCGATTTTTCTCAGCCCGTGGCTTTCTTTGGAAAGGGCATCA TCGTCAGCGCCAACGACAAGCATGCTTACCGGACGATTGACGACCTGAAGGGCACGGTGGTCGGCGCCGGCGCCGGCGAG GAAACCTCGGAGGAACTCGCGAAGCTCGGCATCTTCAAGGAAGTGAAGTTGTACAACAATGCCGCCGATATGGCCCGCGA TGTCACGCTTGGCCGGATTACGGCAGCATTCAATGATTATCCGATCTGGAAGGCGCAGGAGGCGGCCGGTACGCTGCAGG GCTGCCGTGTGGTGGACGGATTCAAACCGCTCCGGCAGGTCCCGATTGCATTCGGCGTGAAGAAAGGCAATACGGCCTTG CTGTCGAAAATCAACGATGGCTTGGCAAAGATCAAGGCGGACGGGACGTTGGACAAGATCCTGAAGAAATGGAATTACGT CGATTGA
Upstream 100 bases:
>100_bases GGCACCGCATTGAATGCGTTTCGGCATGTAAAGGCAGGCGAACCTCTTGTCGGCATGCTTTTGCAGCACGTGGATAAAGA AACTTCCTCAAGGATAGACC
Downstream 100 bases:
>100_bases CGTGCCGGATGTCAAGCGGGCCTGGTGCGAGGGCATAGCGGCGCGGGTCTTTTGCCGGGTCGAGCGGGACGCGCTCCGAC TCGCCGGATGCACCGGGGTA
Product: ABC polar amino acid family transporter periplasmic ligand binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MFQPTPHRASGKHASFFQRILVTAALAVAAALGASPAWAAQLTVSAGTTPSSIPNAFLNIKTNQIEGVMPDVIRAIGQRE GFGVSFNVIPYSALIQSVVSDKIDLIVAGMTPTSRREEVIDFSQPVAFFGKGIIVSANDKHAYRTIDDLKGTVVGAGAGE ETSEELAKLGIFKEVKLYNNAADMARDVTLGRITAAFNDYPIWKAQEAAGTLQGCRVVDGFKPLRQVPIAFGVKKGNTAL LSKINDGLAKIKADGTLDKILKKWNYVD
Sequences:
>Translated_268_residues MFQPTPHRASGKHASFFQRILVTAALAVAAALGASPAWAAQLTVSAGTTPSSIPNAFLNIKTNQIEGVMPDVIRAIGQRE GFGVSFNVIPYSALIQSVVSDKIDLIVAGMTPTSRREEVIDFSQPVAFFGKGIIVSANDKHAYRTIDDLKGTVVGAGAGE ETSEELAKLGIFKEVKLYNNAADMARDVTLGRITAAFNDYPIWKAQEAAGTLQGCRVVDGFKPLRQVPIAFGVKKGNTAL LSKINDGLAKIKADGTLDKILKKWNYVD >Mature_268_residues MFQPTPHRASGKHASFFQRILVTAALAVAAALGASPAWAAQLTVSAGTTPSSIPNAFLNIKTNQIEGVMPDVIRAIGQRE GFGVSFNVIPYSALIQSVVSDKIDLIVAGMTPTSRREEVIDFSQPVAFFGKGIIVSANDKHAYRTIDDLKGTVVGAGAGE ETSEELAKLGIFKEVKLYNNAADMARDVTLGRITAAFNDYPIWKAQEAAGTLQGCRVVDGFKPLRQVPIAFGVKKGNTAL LSKINDGLAKIKADGTLDKILKKWNYVD
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=255, Percent_Identity=30.1960784313725, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787088, Length=252, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1788228, Length=201, Percent_Identity=26.865671641791, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788648, Length=236, Percent_Identity=28.3898305084746, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1787031, Length=243, Percent_Identity=28.3950617283951, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28649; Mature: 28649
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQPTPHRASGKHASFFQRILVTAALAVAAALGASPAWAAQLTVSAGTTPSSIPNAFLNI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEE KTNQIEGVMPDVIRAIGQREGFGVSFNVIPYSALIQSVVSDKIDLIVAGMTPTSRREEVI ECCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHH DFSQPVAFFGKGIIVSANDKHAYRTIDDLKGTVVGAGAGEETSEELAKLGIFKEVKLYNN HCCCCHHHHCCCEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHCCHHHHHHHCC AADMARDVTLGRITAAFNDYPIWKAQEAAGTLQGCRVVDGFKPLRQVPIAFGVKKGNTAL HHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCEEHHCHHHHHHCCHHEEECCCCHHH LSKINDGLAKIKADGTLDKILKKWNYVD HHHHHHHHHEEECCCCHHHHHHHCCCCC >Mature Secondary Structure MFQPTPHRASGKHASFFQRILVTAALAVAAALGASPAWAAQLTVSAGTTPSSIPNAFLNI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEE KTNQIEGVMPDVIRAIGQREGFGVSFNVIPYSALIQSVVSDKIDLIVAGMTPTSRREEVI ECCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHH DFSQPVAFFGKGIIVSANDKHAYRTIDDLKGTVVGAGAGEETSEELAKLGIFKEVKLYNN HCCCCHHHHCCCEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHCCHHHHHHHCC AADMARDVTLGRITAAFNDYPIWKAQEAAGTLQGCRVVDGFKPLRQVPIAFGVKKGNTAL HHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCEEHHCHHHHHHCCHHEEECCCCHHH LSKINDGLAKIKADGTLDKILKKWNYVD HHHHHHHHHEEECCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]