BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession	NC_012721
Length	2,827,333

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The map label for this gene is gabD [H]

Identifier: 238024350

GI number: 238024350

Start: 1161513

End: 1162991

Strand: Reverse

Name: gabD [H]

Synonym: bglu_2g09420

Alternate gene names: 238024350

Gene position: 1162991-1161513 (Counterclockwise)

Preceding gene: 238024351

Following gene: 238024349

Centisome position: 41.13

GC content: 65.58

Gene sequence:

>1479_bases
ATGAGCCTCGATCTAGAAAAGCAAGCGCGCGCACTGATCCGCGCCGAGAATTTCATCAATGGGAGCTGGGTCGCCGCGGC
GAGCGGACGCCGCTTCGCGGTCACCGATCCCGCCACGGGAAAACTGATCGCCGAGGTGGCCGATAGCGGCCCCGCCGATG
CGCGTGCGGCAGCCGACGCCGCCGCCGCGGCGCTGCCCGCGTGGCGCGCAATGCTGCCCAAGGAACGCGCGGCGATACTG
CGCCGCTGGCATGCTCTCATCCTCGAGCAACAAGAAGCGCTTGCCGCCCTCATCTCGCTCGAGCAAGGCAAGCCGCTCGC
CGAGGGCCGCGGCGAGGTAGCCTACGGCGCGTCCTATGTGGCATGGTTTGCGGAGGAGGCCACGCGCATTTACGGCGACC
TCATCGCTGAGCAGCAGCGCGGCAAGCGCATGAGCGCAATCAAGGAGCCCATCGGTGTGGTGGCGGCGATTACGCCGTGG
AATTTCCCGTTGGCGATGATCGCACGCAAGATCGCGCCGGCGCTGGCCGCCGGCTGCACGGTCGTCGCGAAGCCTGCCGA
GGACACGCCCCTCACCGCGATTGCGCTGGTGATGCTCGCGCATCAAGCGGGCGTGCCCGAGGGCGTGCTCAATTTGATCT
CGGCCTCGCGCGAGTCGGCCGTCGAGGCGGTCGGCGCATGGCTCGCGGATGGGCGGGTTCGCAAGATCACCTTTACGGGC
TCGACGCCGGTTGGCAAGTATCTCGCCCGCGAATCGGCCAGCACGCTGAAGAAGGTTTCCCTGGAGTTGGGCGGCAACGC
GCCGTTTATCGTATTCGAGGACGCAGACCTGGAGGCGGCCGTGACGGGCCTGCTTGCCGCCAAATTCCGAAACGGCGGCC
AGACCTGCGTCAGCCCCAACCGCGTGTACGTCCAGCGCAGCGTCTACCCGCGCTTTTCCACCATGTTGAGCGCCAGGGTA
GCCGAGTTGCGCGTCGGCCCCGCCAGCGATTCGGCTTCGCAGGTCGGCCCGATGATCAACTTGCGTGCGATCGAGAAAAT
CGAGCGCCACGTGGATGATGCCGTCGCAAATGGTGCGTCCGTGTTGGCGGGAGGCAGGGTGCTCACCGAGCTGGGAGTTC
GGTACTACGCCCCAACGGTGCTCGCCGATGCAACATCCGATATGTTGCTGTTCGAAGAGGAAACGTTCGGTCCCGTCGTG
CCGCTCTTTGCATTCGATACCGAACAGCAGGCCGTGCAGGCCGCCAACGATACGCCATTCGGCCTGGCGTCGTACTTCTA
CAGCCAGGATCTGCGGCGCATCGATCGCGTCTCACGCGCACTCGAGGCCGGCATCGTCGGTATCAACGAAGGGGTGCTGG
CGTCGGAAGCGGCACCGTTCGGCGGCGTGAAGGAATCGGGCTATGGCCGCGAAGGCTCGAAGTACGGGCTGGACGACTAT
CTGTCGATCAAATACCTGTGTCAGGGAGGCCTGGCATGA

Upstream 100 bases:

>100_bases
GTCTCATTGCCTGGTCATCGAGCACGCCGAATGATTCGCCGGCGACGCCGAACGCGATGCGTTGCTCGCCCGCACCGACT
CACGCACAGGAAGCGATCTC

Downstream 100 bases:

>100_bases
CGATCGCGGCCTATCCGATCGAAATCGACTTTCCCGATATCTCCGTCCATGCCGCGGGCAATCGGGGCGTCCCCTACGTC
TATACGTTCGATTCCGGCGT

Product: succinate-semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSLDLEKQARALIRAENFINGSWVAAASGRRFAVTDPATGKLIAEVADSGPADARAAADAAAAALPAWRAMLPKERAAIL
RRWHALILEQQEALAALISLEQGKPLAEGRGEVAYGASYVAWFAEEATRIYGDLIAEQQRGKRMSAIKEPIGVVAAITPW
NFPLAMIARKIAPALAAGCTVVAKPAEDTPLTAIALVMLAHQAGVPEGVLNLISASRESAVEAVGAWLADGRVRKITFTG
STPVGKYLARESASTLKKVSLELGGNAPFIVFEDADLEAAVTGLLAAKFRNGGQTCVSPNRVYVQRSVYPRFSTMLSARV
AELRVGPASDSASQVGPMINLRAIEKIERHVDDAVANGASVLAGGRVLTELGVRYYAPTVLADATSDMLLFEEETFGPVV
PLFAFDTEQQAVQAANDTPFGLASYFYSQDLRRIDRVSRALEAGIVGINEGVLASEAAPFGGVKESGYGREGSKYGLDDY
LSIKYLCQGGLA

Sequences:

>Translated_492_residues
MSLDLEKQARALIRAENFINGSWVAAASGRRFAVTDPATGKLIAEVADSGPADARAAADAAAAALPAWRAMLPKERAAIL
RRWHALILEQQEALAALISLEQGKPLAEGRGEVAYGASYVAWFAEEATRIYGDLIAEQQRGKRMSAIKEPIGVVAAITPW
NFPLAMIARKIAPALAAGCTVVAKPAEDTPLTAIALVMLAHQAGVPEGVLNLISASRESAVEAVGAWLADGRVRKITFTG
STPVGKYLARESASTLKKVSLELGGNAPFIVFEDADLEAAVTGLLAAKFRNGGQTCVSPNRVYVQRSVYPRFSTMLSARV
AELRVGPASDSASQVGPMINLRAIEKIERHVDDAVANGASVLAGGRVLTELGVRYYAPTVLADATSDMLLFEEETFGPVV
PLFAFDTEQQAVQAANDTPFGLASYFYSQDLRRIDRVSRALEAGIVGINEGVLASEAAPFGGVKESGYGREGSKYGLDDY
LSIKYLCQGGLA
>Mature_491_residues
SLDLEKQARALIRAENFINGSWVAAASGRRFAVTDPATGKLIAEVADSGPADARAAADAAAAALPAWRAMLPKERAAILR
RWHALILEQQEALAALISLEQGKPLAEGRGEVAYGASYVAWFAEEATRIYGDLIAEQQRGKRMSAIKEPIGVVAAITPWN
FPLAMIARKIAPALAAGCTVVAKPAEDTPLTAIALVMLAHQAGVPEGVLNLISASRESAVEAVGAWLADGRVRKITFTGS
TPVGKYLARESASTLKKVSLELGGNAPFIVFEDADLEAAVTGLLAAKFRNGGQTCVSPNRVYVQRSVYPRFSTMLSARVA
ELRVGPASDSASQVGPMINLRAIEKIERHVDDAVANGASVLAGGRVLTELGVRYYAPTVLADATSDMLLFEEETFGPVVP
LFAFDTEQQAVQAANDTPFGLASYFYSQDLRRIDRVSRALEAGIVGINEGVLASEAAPFGGVKESGYGREGSKYGLDDYL
SIKYLCQGGLA

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=482, Percent_Identity=51.0373443983402, Blast_Score=479, Evalue=1e-135,
Organism=Homo sapiens, GI25777721, Length=495, Percent_Identity=49.4949494949495, Blast_Score=468, Evalue=1e-132,
Organism=Homo sapiens, GI25777724, Length=478, Percent_Identity=38.4937238493724, Blast_Score=296, Evalue=3e-80,
Organism=Homo sapiens, GI12007648, Length=485, Percent_Identity=34.639175257732, Blast_Score=293, Evalue=3e-79,
Organism=Homo sapiens, GI25777730, Length=473, Percent_Identity=37.4207188160677, Blast_Score=289, Evalue=4e-78,
Organism=Homo sapiens, GI153266822, Length=473, Percent_Identity=36.7864693446089, Blast_Score=282, Evalue=5e-76,
Organism=Homo sapiens, GI25777732, Length=482, Percent_Identity=36.5145228215768, Blast_Score=279, Evalue=5e-75,
Organism=Homo sapiens, GI238814322, Length=477, Percent_Identity=36.8972746331237, Blast_Score=278, Evalue=1e-74,
Organism=Homo sapiens, GI115387104, Length=479, Percent_Identity=34.6555323590814, Blast_Score=275, Evalue=9e-74,
Organism=Homo sapiens, GI21361176, Length=475, Percent_Identity=35.7894736842105, Blast_Score=266, Evalue=5e-71,
Organism=Homo sapiens, GI21614513, Length=477, Percent_Identity=35.8490566037736, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI25777728, Length=422, Percent_Identity=38.1516587677725, Blast_Score=258, Evalue=8e-69,
Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=35.5042016806723, Blast_Score=255, Evalue=5e-68,
Organism=Homo sapiens, GI25952152, Length=479, Percent_Identity=32.5678496868476, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI11095441, Length=437, Percent_Identity=28.8329519450801, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI188035924, Length=479, Percent_Identity=29.6450939457203, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI310128093, Length=478, Percent_Identity=29.9163179916318, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI310128103, Length=479, Percent_Identity=29.6450939457203, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI301500698, Length=257, Percent_Identity=35.408560311284, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI310128091, Length=478, Percent_Identity=28.6610878661088, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI223972651, Length=480, Percent_Identity=30.2083333333333, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI73466520, Length=334, Percent_Identity=29.940119760479, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI4557303, Length=334, Percent_Identity=29.940119760479, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI206597441, Length=433, Percent_Identity=28.175519630485, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI206597439, Length=433, Percent_Identity=28.175519630485, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI22907049, Length=433, Percent_Identity=28.175519630485, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI71773324, Length=364, Percent_Identity=29.3956043956044, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI4502043, Length=335, Percent_Identity=30.1492537313433, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI238814371, Length=335, Percent_Identity=30.1492537313433, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI73695881, Length=335, Percent_Identity=29.5522388059701, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI73695879, Length=335, Percent_Identity=29.5522388059701, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI310128089, Length=331, Percent_Identity=30.2114803625378, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI310128097, Length=245, Percent_Identity=33.469387755102, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI25777736, Length=331, Percent_Identity=28.3987915407855, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI25777734, Length=331, Percent_Identity=28.3987915407855, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI238859541, Length=331, Percent_Identity=28.3987915407855, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI310128087, Length=301, Percent_Identity=30.2325581395349, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI310128095, Length=245, Percent_Identity=30.6122448979592, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI310128099, Length=241, Percent_Identity=29.045643153527, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI310128101, Length=241, Percent_Identity=29.045643153527, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI223972653, Length=189, Percent_Identity=31.2169312169312, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1789015, Length=479, Percent_Identity=54.6972860125261, Blast_Score=532, Evalue=1e-152,
Organism=Escherichia coli, GI1787684, Length=469, Percent_Identity=38.8059701492537, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI87081896, Length=478, Percent_Identity=38.4937238493724, Blast_Score=303, Evalue=2e-83,
Organism=Escherichia coli, GI1787715, Length=471, Percent_Identity=38.0042462845011, Blast_Score=291, Evalue=5e-80,
Organism=Escherichia coli, GI1787558, Length=474, Percent_Identity=34.3881856540084, Blast_Score=271, Evalue=6e-74,
Organism=Escherichia coli, GI1786504, Length=475, Percent_Identity=35.5789473684211, Blast_Score=268, Evalue=5e-73,
Organism=Escherichia coli, GI87082295, Length=485, Percent_Identity=36.9072164948454, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI87081926, Length=452, Percent_Identity=34.7345132743363, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788042, Length=465, Percent_Identity=32.0430107526882, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1787250, Length=458, Percent_Identity=31.6593886462882, Blast_Score=186, Evalue=4e-48,
Organism=Escherichia coli, GI1787653, Length=419, Percent_Identity=24.3436754176611, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17534119, Length=470, Percent_Identity=42.9787234042553, Blast_Score=388, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI133930964, Length=482, Percent_Identity=38.5892116182573, Blast_Score=295, Evalue=3e-80,
Organism=Caenorhabditis elegans, GI17562198, Length=473, Percent_Identity=37.6321353065539, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI25144435, Length=478, Percent_Identity=36.4016736401674, Blast_Score=286, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI25143874, Length=488, Percent_Identity=33.6065573770492, Blast_Score=270, Evalue=9e-73,
Organism=Caenorhabditis elegans, GI25143876, Length=488, Percent_Identity=33.6065573770492, Blast_Score=270, Evalue=1e-72,
Organism=Caenorhabditis elegans, GI32564736, Length=422, Percent_Identity=36.0189573459716, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17551164, Length=480, Percent_Identity=32.9166666666667, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI71995606, Length=462, Percent_Identity=33.7662337662338, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI71995613, Length=419, Percent_Identity=32.4582338902148, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI115534176, Length=468, Percent_Identity=31.1965811965812, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71986308, Length=439, Percent_Identity=29.1571753986333, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17564084, Length=344, Percent_Identity=31.3953488372093, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI32566756, Length=346, Percent_Identity=30.9248554913295, Blast_Score=161, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI25146391, Length=346, Percent_Identity=30.9248554913295, Blast_Score=161, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI25146394, Length=346, Percent_Identity=30.9248554913295, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17534447, Length=452, Percent_Identity=28.3185840707965, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI115532534, Length=343, Percent_Identity=28.5714285714286, Blast_Score=115, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI32564151, Length=407, Percent_Identity=28.009828009828, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI71990744, Length=288, Percent_Identity=28.125, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319478, Length=481, Percent_Identity=47.4012474012474, Blast_Score=454, Evalue=1e-128,
Organism=Saccharomyces cerevisiae, GI6320917, Length=468, Percent_Identity=38.034188034188, Blast_Score=300, Evalue=3e-82,
Organism=Saccharomyces cerevisiae, GI6324950, Length=469, Percent_Identity=35.3944562899787, Blast_Score=289, Evalue=5e-79,
Organism=Saccharomyces cerevisiae, GI6325196, Length=472, Percent_Identity=36.0169491525424, Blast_Score=284, Evalue=3e-77,
Organism=Saccharomyces cerevisiae, GI6323822, Length=482, Percent_Identity=34.2323651452282, Blast_Score=259, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6323821, Length=483, Percent_Identity=33.7474120082816, Blast_Score=256, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=474, Percent_Identity=27.6371308016878, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6323757, Length=327, Percent_Identity=29.6636085626911, Blast_Score=120, Evalue=6e-28,
Organism=Saccharomyces cerevisiae, GI6321826, Length=482, Percent_Identity=27.3858921161826, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281362580, Length=494, Percent_Identity=47.9757085020243, Blast_Score=489, Evalue=1e-138,
Organism=Drosophila melanogaster, GI62472918, Length=494, Percent_Identity=47.9757085020243, Blast_Score=489, Evalue=1e-138,
Organism=Drosophila melanogaster, GI62472926, Length=494, Percent_Identity=47.9757085020243, Blast_Score=489, Evalue=1e-138,
Organism=Drosophila melanogaster, GI62472936, Length=494, Percent_Identity=47.9757085020243, Blast_Score=489, Evalue=1e-138,
Organism=Drosophila melanogaster, GI21356737, Length=494, Percent_Identity=47.9757085020243, Blast_Score=489, Evalue=1e-138,
Organism=Drosophila melanogaster, GI24650465, Length=476, Percent_Identity=37.6050420168067, Blast_Score=307, Evalue=9e-84,
Organism=Drosophila melanogaster, GI20129399, Length=474, Percent_Identity=36.2869198312236, Blast_Score=281, Evalue=6e-76,
Organism=Drosophila melanogaster, GI24585660, Length=477, Percent_Identity=33.9622641509434, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24638878, Length=486, Percent_Identity=27.9835390946502, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24638876, Length=486, Percent_Identity=27.9835390946502, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24666674, Length=460, Percent_Identity=29.1304347826087, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI45552499, Length=339, Percent_Identity=28.9085545722714, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI281360303, Length=344, Percent_Identity=29.0697674418605, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI281360299, Length=339, Percent_Identity=28.3185840707965, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281360297, Length=339, Percent_Identity=28.3185840707965, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281360295, Length=339, Percent_Identity=28.3185840707965, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24586250, Length=339, Percent_Identity=28.3185840707965, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281360301, Length=339, Percent_Identity=28.3185840707965, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24668425, Length=365, Percent_Identity=27.1232876712329, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24668417, Length=365, Percent_Identity=27.1232876712329, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24668413, Length=365, Percent_Identity=27.1232876712329, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI28571798, Length=436, Percent_Identity=24.0825688073394, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571796, Length=436, Percent_Identity=24.0825688073394, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571794, Length=436, Percent_Identity=24.0825688073394, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571802, Length=436, Percent_Identity=24.0825688073394, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28571800, Length=436, Percent_Identity=24.0825688073394, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28571806, Length=436, Percent_Identity=24.0825688073394, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28574525, Length=464, Percent_Identity=23.9224137931034, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI281360293, Length=161, Percent_Identity=33.5403726708075, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52140; Mature: 52009

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDLEKQARALIRAENFINGSWVAAASGRRFAVTDPATGKLIAEVADSGPADARAAADA
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHH
AAAALPAWRAMLPKERAAILRRWHALILEQQEALAALISLEQGKPLAEGRGEVAYGASYV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHH
AWFAEEATRIYGDLIAEQQRGKRMSAIKEPIGVVAAITPWNFPLAMIARKIAPALAAGCT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
VVAKPAEDTPLTAIALVMLAHQAGVPEGVLNLISASRESAVEAVGAWLADGRVRKITFTG
EEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
STPVGKYLARESASTLKKVSLELGGNAPFIVFEDADLEAAVTGLLAAKFRNGGQTCVSPN
CCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC
RVYVQRSVYPRFSTMLSARVAELRVGPASDSASQVGPMINLRAIEKIERHVDDAVANGAS
EEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCH
VLAGGRVLTELGVRYYAPTVLADATSDMLLFEEETFGPVVPLFAFDTEQQAVQAANDTPF
HHCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHCCCCCH
GLASYFYSQDLRRIDRVSRALEAGIVGINEGVLASEAAPFGGVKESGYGREGSKYGLDDY
HHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHH
LSIKYLCQGGLA
HHHHHHHCCCCC
>Mature Secondary Structure 
SLDLEKQARALIRAENFINGSWVAAASGRRFAVTDPATGKLIAEVADSGPADARAAADA
CCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHH
AAAALPAWRAMLPKERAAILRRWHALILEQQEALAALISLEQGKPLAEGRGEVAYGASYV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHH
AWFAEEATRIYGDLIAEQQRGKRMSAIKEPIGVVAAITPWNFPLAMIARKIAPALAAGCT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
VVAKPAEDTPLTAIALVMLAHQAGVPEGVLNLISASRESAVEAVGAWLADGRVRKITFTG
EEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
STPVGKYLARESASTLKKVSLELGGNAPFIVFEDADLEAAVTGLLAAKFRNGGQTCVSPN
CCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC
RVYVQRSVYPRFSTMLSARVAELRVGPASDSASQVGPMINLRAIEKIERHVDDAVANGAS
EEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCH
VLAGGRVLTELGVRYYAPTVLADATSDMLLFEEETFGPVVPLFAFDTEQQAVQAANDTPF
HHCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHCCCCCH
GLASYFYSQDLRRIDRVSRALEAGIVGINEGVLASEAAPFGGVKESGYGREGSKYGLDDY
HHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHH
LSIKYLCQGGLA
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]