| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is phzA [H]
Identifier: 238024337
GI number: 238024337
Start: 1144910
End: 1145533
Strand: Direct
Name: phzA [H]
Synonym: bglu_2g09250
Alternate gene names: 238024337
Gene position: 1144910-1145533 (Clockwise)
Preceding gene: 238024336
Following gene: 238024338
Centisome position: 40.49
GC content: 62.82
Gene sequence:
>624_bases ATGGCTGGTATCCCGTCGATTCAACCGTACGCGCTGCCCGATTCGAGCAGCCTGCCCGAGAATGTCGTGTCATGGCGTGT CGACCCGTCGCGCGCGCTGCTGCTCATCCATGACATGCAGAACTATTTCCTTTCGCCGTTGCCGCCGACGCTGCGCGAGA CGCTGACGACCAATGTCGCGTCGCTGCGCAAACGGTGCAAGCAGGCCGGTATTCCCGTCGCGTACACGGCCCATCCCGGA CGCATGACCGAGAAGGAACGCGGTTTGTTACGCGATTTTTGGGGCCCGGGCATGGAGACGACGCCGGCCGATCGGGACGT CGCGGAGGCTGTCGGCCCGTCTCCGGACGACTGGATGCTCACGAAGTGGCGCTACAGCGCATTTTTCCGCACCGACCTGC GCGAGCGCATGCGGGAGAACGGTCGCGATCAGCTGATGTTGTGTGGCGTCTACGCGCACATCGGCGTAATGATGTCGGCC GTCGATGCGTTCACGAACGACATTCAACCGTTCTTCGTCGCCGATGGCGTGGCGGATTTTTCCGAAGACCACCATCACCA GGCCCTGGAATACGTAGCCACGCGTTGCGGCAAGGTGGTGAGCACCGAGGAGGCGCTGGCATGA
Upstream 100 bases:
>100_bases TCATGAACCCTTGCGAGCAATTCCGTTCGTTGGGTATCGAGGTTCCCGAAGTGCGCCGGGATGGCCTACCGAGCTGACGC ATACTCAACGGAGGAGACAA
Downstream 100 bases:
>100_bases ACGCTGATCCGAATCGCAACCTTTTCAACCGCATCCTCGACGGACAAGCGCCGTGCTTTGCGTTGATCGCACGTTCGACG GGTAGCGCCGGGGAGCGCGC
Product: Isochorismatase
Products: NA
Alternate protein names: 2,3 dihydro-2,3 dihydroxybenzoate synthase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAGIPSIQPYALPDSSSLPENVVSWRVDPSRALLLIHDMQNYFLSPLPPTLRETLTTNVASLRKRCKQAGIPVAYTAHPG RMTEKERGLLRDFWGPGMETTPADRDVAEAVGPSPDDWMLTKWRYSAFFRTDLRERMRENGRDQLMLCGVYAHIGVMMSA VDAFTNDIQPFFVADGVADFSEDHHHQALEYVATRCGKVVSTEEALA
Sequences:
>Translated_207_residues MAGIPSIQPYALPDSSSLPENVVSWRVDPSRALLLIHDMQNYFLSPLPPTLRETLTTNVASLRKRCKQAGIPVAYTAHPG RMTEKERGLLRDFWGPGMETTPADRDVAEAVGPSPDDWMLTKWRYSAFFRTDLRERMRENGRDQLMLCGVYAHIGVMMSA VDAFTNDIQPFFVADGVADFSEDHHHQALEYVATRCGKVVSTEEALA >Mature_206_residues AGIPSIQPYALPDSSSLPENVVSWRVDPSRALLLIHDMQNYFLSPLPPTLRETLTTNVASLRKRCKQAGIPVAYTAHPGR MTEKERGLLRDFWGPGMETTPADRDVAEAVGPSPDDWMLTKWRYSAFFRTDLRERMRENGRDQLMLCGVYAHIGVMMSAV DAFTNDIQPFFVADGVADFSEDHHHQALEYVATRCGKVVSTEEALA
Specific function: Involved in the biosynthesis of the antibiotic phenazine, a nitrogen-containing heterocyclic molecule having important roles in virulence, competition and biological control. This isochorismatase may remove pyruvate from chorismate during the formation of
COG id: COG1535
COG function: function code Q; Isochorismate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family [H]
Homologues:
Organism=Escherichia coli, GI1786811, Length=206, Percent_Identity=50.9708737864078, Blast_Score=223, Evalue=6e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016291 - InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: =3.3.2.1 [H]
Molecular weight: Translated: 23200; Mature: 23068
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIPSIQPYALPDSSSLPENVVSWRVDPSRALLLIHDMQNYFLSPLPPTLRETLTTNVA CCCCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHH SLRKRCKQAGIPVAYTAHPGRMTEKERGLLRDFWGPGMETTPADRDVAEAVGPSPDDWML HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEE TKWRYSAFFRTDLRERMRENGRDQLMLCGVYAHIGVMMSAVDAFTNDIQPFFVADGVADF HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHH SEDHHHQALEYVATRCGKVVSTEEALA HHHHHHHHHHHHHHHHCCHHCHHHHCC >Mature Secondary Structure AGIPSIQPYALPDSSSLPENVVSWRVDPSRALLLIHDMQNYFLSPLPPTLRETLTTNVA CCCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHH SLRKRCKQAGIPVAYTAHPGRMTEKERGLLRDFWGPGMETTPADRDVAEAVGPSPDDWML HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEE TKWRYSAFFRTDLRERMRENGRDQLMLCGVYAHIGVMMSAVDAFTNDIQPFFVADGVADF HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHH SEDHHHQALEYVATRCGKVVSTEEALA HHHHHHHHHHHHHHHHCCHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8586283 [H]