Click here to switch to the map view.

The map label for this gene is fdhE [H]

Identifier: 238024284

GI number: 238024284

Start: 1052877

End: 1053812

Strand: Direct

Name: fdhE [H]

Synonym: bglu_2g08670

Alternate gene names: 238024284

Gene position: 1052877-1053812 (Clockwise)

Preceding gene: 238024283

Following gene: 238024285

Centisome position: 37.24

GC content: 70.3

Gene sequence:

>936_bases
GTGACACAACGCATACTCGATCCGAACGACATCGCGGCGCTCGATCATTCGGCGATTCCGCGCTTCCGGCTGCCCGAGCG
CGCCACCGCGTTCGCCGAGCGCGCCGCGCGGCTGCGCAAGCTCGCCGATCTCAATCCGATTTCCGGCTATCTGCGCCTGA
TGGCGGCACTCGCCGACACGCAGCAGGCCGTGCTCGACACGCTCGAGGCCGCGCCGCCGAGTGCCGAGGCGATCCGCCGG
GCGCAGGCGCATTCGATGCCGGTGCTGCCGGCGATGACGGGCGCGCGCGACCCGCAATGGCGCGCGGTGCTGCAGCGCCT
GCTCGACGGCATCGAGCAGGCCGGGCTCGCCACGCCGCCGCTCGCGAAGCTGATCGACACGCTGCGCCTGAAAAGCGCGG
CCGAACTCGAGGCCCAGGCCGACGCGCTCGTCGCGCTGCGGCTCGCCGAGATCGAGCCGGCCTCGGCGCCGTTCATCGCG
GCCGCGCTGCAGGTGGTGTGGACCGATCTCGCCTCGCGCGTGGCGCCTGCCGACGTGCCGTATCTCGACCAGCCGGGGCT
GTGCCCCGTGTGCGGCTCGCACCCGGTCGCGAGCGTGATCCGCGTGGGCGGCCCCTACAACGGCTATCGCTTCCTGCAAT
GCTCGCTCTGCACGAGCGAATGGCACATGGTGCGCACCAAGTGCTCGTCCTGCGATTCGACCAAGGGCATCGCGTATCAC
GGCGTGGAGGGCGGCAGCGAGGCGCTCAAGGCCGAGTCCTGCGACGAATGCCATACCTACCGCAAGATCGGCTACCAGGA
GAAGGACTACGGGTTCGAGCCGCTCGCCGACGATCTCGCCAGCCTCACACTCGACCTGCTGATGAACGAAGCCGGCTATC
GGCGCGCGTCGCCGAATCCGCTGCTGTGGCCCGAGCTGCCGGCCTCCGACGCTTGA

Upstream 100 bases:

>100_bases
CATCGATCCTCGCGGCGGCGAGCGCACCGCGCGCGTGCCGGTCGCGGCGAATCATCCGGCGCTCCGGCGGCGTCGGCACA
GACTGTACTGGGTGATCCAC

Downstream 100 bases:

>100_bases
GCGGAGCACCGACTTGAGCGATCACGGCCCGACCGAACTGAAGGCGCTGCTCGCGCGCGTGCCGTCCGTGGAGCGGATCG
TGTCGTCCGACGCGTTACGC

Product: formate dehydrogenase accessory protein FdhE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTQRILDPNDIAALDHSAIPRFRLPERATAFAERAARLRKLADLNPISGYLRLMAALADTQQAVLDTLEAAPPSAEAIRR
AQAHSMPVLPAMTGARDPQWRAVLQRLLDGIEQAGLATPPLAKLIDTLRLKSAAELEAQADALVALRLAEIEPASAPFIA
AALQVVWTDLASRVAPADVPYLDQPGLCPVCGSHPVASVIRVGGPYNGYRFLQCSLCTSEWHMVRTKCSSCDSTKGIAYH
GVEGGSEALKAESCDECHTYRKIGYQEKDYGFEPLADDLASLTLDLLMNEAGYRRASPNPLLWPELPASDA

Sequences:

>Translated_311_residues
MTQRILDPNDIAALDHSAIPRFRLPERATAFAERAARLRKLADLNPISGYLRLMAALADTQQAVLDTLEAAPPSAEAIRR
AQAHSMPVLPAMTGARDPQWRAVLQRLLDGIEQAGLATPPLAKLIDTLRLKSAAELEAQADALVALRLAEIEPASAPFIA
AALQVVWTDLASRVAPADVPYLDQPGLCPVCGSHPVASVIRVGGPYNGYRFLQCSLCTSEWHMVRTKCSSCDSTKGIAYH
GVEGGSEALKAESCDECHTYRKIGYQEKDYGFEPLADDLASLTLDLLMNEAGYRRASPNPLLWPELPASDA
>Mature_310_residues
TQRILDPNDIAALDHSAIPRFRLPERATAFAERAARLRKLADLNPISGYLRLMAALADTQQAVLDTLEAAPPSAEAIRRA
QAHSMPVLPAMTGARDPQWRAVLQRLLDGIEQAGLATPPLAKLIDTLRLKSAAELEAQADALVALRLAEIEPASAPFIAA
ALQVVWTDLASRVAPADVPYLDQPGLCPVCGSHPVASVIRVGGPYNGYRFLQCSLCTSEWHMVRTKCSSCDSTKGIAYHG
VEGGSEALKAESCDECHTYRKIGYQEKDYGFEPLADDLASLTLDLLMNEAGYRRASPNPLLWPELPASDA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

Organism=Escherichia coli, GI1790324, Length=308, Percent_Identity=38.961038961039, Blast_Score=207, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 33637; Mature: 33506

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRILDPNDIAALDHSAIPRFRLPERATAFAERAARLRKLADLNPISGYLRLMAALADT
CCCCCCCCCHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QQAVLDTLEAAPPSAEAIRRAQAHSMPVLPAMTGARDPQWRAVLQRLLDGIEQAGLATPP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCH
LAKLIDTLRLKSAAELEAQADALVALRLAEIEPASAPFIAAALQVVWTDLASRVAPADVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
YLDQPGLCPVCGSHPVASVIRVGGPYNGYRFLQCSLCTSEWHMVRTKCSSCDSTKGIAYH
CCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCEEEE
GVEGGSEALKAESCDECHTYRKIGYQEKDYGFEPLADDLASLTLDLLMNEAGYRRASPNP
CCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
LLWPELPASDA
CCCCCCCCCCC
>Mature Secondary Structure 
TQRILDPNDIAALDHSAIPRFRLPERATAFAERAARLRKLADLNPISGYLRLMAALADT
CCCCCCCCHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QQAVLDTLEAAPPSAEAIRRAQAHSMPVLPAMTGARDPQWRAVLQRLLDGIEQAGLATPP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCH
LAKLIDTLRLKSAAELEAQADALVALRLAEIEPASAPFIAAALQVVWTDLASRVAPADVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
YLDQPGLCPVCGSHPVASVIRVGGPYNGYRFLQCSLCTSEWHMVRTKCSSCDSTKGIAYH
CCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCEEEE
GVEGGSEALKAESCDECHTYRKIGYQEKDYGFEPLADDLASLTLDLLMNEAGYRRASPNP
CCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
LLWPELPASDA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA