| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024273
Identifier: 238024273
GI number: 238024273
Start: 1040095
End: 1041261
Strand: Reverse
Name: 238024273
Synonym: bglu_2g08560
Alternate gene names: NA
Gene position: 1041261-1040095 (Counterclockwise)
Preceding gene: 238024277
Following gene: 238024269
Centisome position: 36.83
GC content: 70.61
Gene sequence:
>1167_bases ATGAATTTCCCCAGCGGGCCGGCATTGGCGCGGCCGGCCGCCCTCGAGCACAAGGACGCCCTGATCGACGCGCTGCGCGG CTTCGCGGCGCTGCTGGTGGCGTATTTCCATTGCCGGCAGGTGGTCTGGATCGGCATGCAGGCGTTCCACCAGACGCACG GCCACGCGCTCGACGCCGGCGCGCTGGCCGCCTACCTGACCTTCCCGTTCGCCTGGGGCTCGGCCGGCGTGCCGGTGTTC TTCGTGATCAGCGGCTACTGCATCCATCGCGGCGCGGCGCTGAAGCTGGCCGCCGCCCCTCACTACCGCCTCGATGCGCT GAACTTCTGGGCACGCCGTTTCGCGCGCATCTATCCGGTGCTGCTCGCCGCGCTGCTCGTCACGCTCGCACTCGACCTGA TCAGCCTGCAGGTCACGCCGGTGAGCCACAAGATCCGCGAGATCGGCTGGCGCGCGTTCATGGTGAACCTGCTGTCGCTG CAGGGCATCGCGGGCCCGACCTACGGCTCGAACGGCGCGCTCTGGACGCTGTCGCTCGAGGTGCAGTTCTACGCCGTCTA TCCGCTCTGGCTCGCGCTGCGCAAGCGGATCGGCATCGTGCCGGTGGTGCTGGCGGTGGCGTTCGTCAACGCGGGCTCGG CCTGGCTGTTCGAGCGGCACGACCTCCAGGTCTTCACCTCGTACTGGCTGTCGTGGACGCTCGGCGCGCTGATCGCCGAG CTGCGCGTGCGGCGCGCGGCCGGCCCGGCGCCGTCGCGCCGCTGGTATCTGGCCGGCGCGGCCGGCATCGCGCTCGGCTG CGCGGCGTTCCGCATCGGCCAGTACGGGGCCTTCCAGCTCTGGTCGCTCGGCTTTGCCTGCTGCCTGCACGCCGCCATCG CGCGGCCGGCGCCGTCCGGCGCGATCGTGCGGCTGTTCGCGTGGTTCGGCGATTTCAGCTATTCGCTGTACCTGATCCAC CTGCCGCTGTTCGTCTGTCTCGCCTCGCTGCTGTATCGCTCGCAGCTGCAGGTGTCGATCTGGCCGTCGTTCGCGTTCGT CGCCGTCGCGATTGCGCTCGCCTGGCTGTTCCACCTGGCCGTCGAGCGGCCCGCCATGCGCTGGTCGGCAAGCCTCAAGC CGTCGGGCGGCAAGCAGCGGCCGGCCGCGCCGACGCTGACGGCATGA
Upstream 100 bases:
>100_bases TTTCTCACGCTCTAGGATGGGCATGCGCGCGCGGCGTCCGGCGGCAGATTGGCCGGTACGCGGCGCGCTTCCCGCACTTC CAAGGCAAGGACACCGACGC
Downstream 100 bases:
>100_bases GGCACGCAGGACAGTCCAGGTCGGGGTGGCCGCCGGGCGACGCGCGCGGGCGCCCCGCCGGCGGCATGCCGAGCCCGAAC GGTGGACGACATCGGCTGCA
Product: putative acyltransferase
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis- Related Membrane Protein; O-Antigen Acetylase
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNFPSGPALARPAALEHKDALIDALRGFAALLVAYFHCRQVVWIGMQAFHQTHGHALDAGALAAYLTFPFAWGSAGVPVF FVISGYCIHRGAALKLAAAPHYRLDALNFWARRFARIYPVLLAALLVTLALDLISLQVTPVSHKIREIGWRAFMVNLLSL QGIAGPTYGSNGALWTLSLEVQFYAVYPLWLALRKRIGIVPVVLAVAFVNAGSAWLFERHDLQVFTSYWLSWTLGALIAE LRVRRAAGPAPSRRWYLAGAAGIALGCAAFRIGQYGAFQLWSLGFACCLHAAIARPAPSGAIVRLFAWFGDFSYSLYLIH LPLFVCLASLLYRSQLQVSIWPSFAFVAVAIALAWLFHLAVERPAMRWSASLKPSGGKQRPAAPTLTA
Sequences:
>Translated_388_residues MNFPSGPALARPAALEHKDALIDALRGFAALLVAYFHCRQVVWIGMQAFHQTHGHALDAGALAAYLTFPFAWGSAGVPVF FVISGYCIHRGAALKLAAAPHYRLDALNFWARRFARIYPVLLAALLVTLALDLISLQVTPVSHKIREIGWRAFMVNLLSL QGIAGPTYGSNGALWTLSLEVQFYAVYPLWLALRKRIGIVPVVLAVAFVNAGSAWLFERHDLQVFTSYWLSWTLGALIAE LRVRRAAGPAPSRRWYLAGAAGIALGCAAFRIGQYGAFQLWSLGFACCLHAAIARPAPSGAIVRLFAWFGDFSYSLYLIH LPLFVCLASLLYRSQLQVSIWPSFAFVAVAIALAWLFHLAVERPAMRWSASLKPSGGKQRPAAPTLTA >Mature_388_residues MNFPSGPALARPAALEHKDALIDALRGFAALLVAYFHCRQVVWIGMQAFHQTHGHALDAGALAAYLTFPFAWGSAGVPVF FVISGYCIHRGAALKLAAAPHYRLDALNFWARRFARIYPVLLAALLVTLALDLISLQVTPVSHKIREIGWRAFMVNLLSL QGIAGPTYGSNGALWTLSLEVQFYAVYPLWLALRKRIGIVPVVLAVAFVNAGSAWLFERHDLQVFTSYWLSWTLGALIAE LRVRRAAGPAPSRRWYLAGAAGIALGCAAFRIGQYGAFQLWSLGFACCLHAAIARPAPSGAIVRLFAWFGDFSYSLYLIH LPLFVCLASLLYRSQLQVSIWPSFAFVAVAIALAWLFHLAVERPAMRWSASLKPSGGKQRPAAPTLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42475; Mature: 42475
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFPSGPALARPAALEHKDALIDALRGFAALLVAYFHCRQVVWIGMQAFHQTHGHALDAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALAAYLTFPFAWGSAGVPVFFVISGYCIHRGAALKLAAAPHYRLDALNFWARRFARIYPV HHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH LLAALLVTLALDLISLQVTPVSHKIREIGWRAFMVNLLSLQGIAGPTYGSNGALWTLSLE HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE VQFYAVYPLWLALRKRIGIVPVVLAVAFVNAGSAWLFERHDLQVFTSYWLSWTLGALIAE EEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH LRVRRAAGPAPSRRWYLAGAAGIALGCAAFRIGQYGAFQLWSLGFACCLHAAIARPAPSG HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC AIVRLFAWFGDFSYSLYLIHLPLFVCLASLLYRSQLQVSIWPSFAFVAVAIALAWLFHLA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHH VERPAMRWSASLKPSGGKQRPAAPTLTA HCCCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFPSGPALARPAALEHKDALIDALRGFAALLVAYFHCRQVVWIGMQAFHQTHGHALDAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALAAYLTFPFAWGSAGVPVFFVISGYCIHRGAALKLAAAPHYRLDALNFWARRFARIYPV HHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH LLAALLVTLALDLISLQVTPVSHKIREIGWRAFMVNLLSLQGIAGPTYGSNGALWTLSLE HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE VQFYAVYPLWLALRKRIGIVPVVLAVAFVNAGSAWLFERHDLQVFTSYWLSWTLGALIAE EEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH LRVRRAAGPAPSRRWYLAGAAGIALGCAAFRIGQYGAFQLWSLGFACCLHAAIARPAPSG HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC AIVRLFAWFGDFSYSLYLIHLPLFVCLASLLYRSQLQVSIWPSFAFVAVAIALAWLFHLA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHH VERPAMRWSASLKPSGGKQRPAAPTLTA HCCCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA