| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024233
Identifier: 238024233
GI number: 238024233
Start: 989876
End: 992629
Strand: Direct
Name: 238024233
Synonym: bglu_2g08140
Alternate gene names: NA
Gene position: 989876-992629 (Clockwise)
Preceding gene: 238024232
Following gene: 238024234
Centisome position: 35.01
GC content: 64.34
Gene sequence:
>2754_bases GTGGTGAAAATTGCACCACACGGGGTTCACCGGCGTAGCCGATACAGCATCATCTGTTCGGACAAGCGCCACGACATCTG GGCCTGCGGTTCGGTGGCCGAATGCACGGCGCTGTACGGCCGTGCCTACACGAATAGCGGCGGACAGATCGATCCGCCCA CGCCGGTCGGCAACATCGCGGCCACGATCCAGGCGCCGAACCTGTCGATCACGTCCGGCGGCCAGATCCAGAACGTCGGC AACGTGATCGGCACGGCCGTGTCGCTGACCGGGCAGAAGCTGATCAACGGCATCACGCGGCCGAACACTTATACGCCGAC CGTCAGCGCGCCGCAGCGCGTGATCACGCTGAGCCCGGCCACGCTGCCGGGGCTGAACCTGTCGATTCCGCGTACCATCG GCACGGGCAGCATCCCCACGCCGGTGGCGGGCACCGCATCGTACGTCGACGGCTCGCTCGGCAGCTCGGGGATCGGCAAC CTCGGCCCGCAGAATCTGCTCAGCAATCTGCCGGCGACGCTGCAGCCGAGTGCGACGCTGTTCTACTACAACCCGCAGGA AGAGGATCTGCTGCTGCAGCAGGCGTCGCTGCAGCAAACCGGCAAGGCCTCGTTTATCGACGGCCTCAGCACCGACAGCA AGAGCGGCATGTCGGTGGTCGAGCAGGAGAAGGCCTACCTGTATCAGAACGCGATCGACTATGCGAAGCAGAACAACCTG CAACTGGGGCAGGCGCTGTCGCAGACGCAGGTCAACCAGCTTACGCAGCCGATGCTGTGGTACGTCGAGCAGACCGTGCC CGACCCGTCGTGCACGGCCACCGGCACGGGCGTGTGCCCGACGATCACGGCCCTGATGCCGCAGGTGTATCTGCCGCAAG GCACGGCGGCGATGACTGCCGGCGGCAACATCACCGGCGGCAACGTCGCGCTGAACTTCAACACCGATGGCAACGGCAGC ATCCTGAACACCGGCAGCATCAGCGCGTCGGGCACGCTCGCCGTGAACACGCAGACGCTGACCAACCAGGCCAATCAGGT CAACGTCGGCCAGATCTGGCAGAAGGTGGACGGCGGCTACCTCGACACCACTGGCACGACGGTCCAGCCGGGCGGATTCA TGAGCGCCGCGAACATGGAACTGAACGTGCAGAGGCTGAACCAGATCGGCGGCGCATTGCAGCAGCTCAATCGGGACGGC GGTGTCGATCAGGCGGGGACGCAGGCGCTGCTGGCGCAGTTGCAGTCGACGCTTGGCGGGAACTTCACGCAGAAGTCGGT GAGCGACGACCTGCATCAGGATTTCGTGAAGGAAGGCGGGGCGTTCGGACTCGACCAGCTCGGCATGCTGGTGGTGGCGG TGGCCGCGTCGCTCGCGACATACGGCGCCGCGAGCGCCGCGATCGGGACGGCGCTGGGCGCAGCAGGCGGCACGTTCGCC ACCGCCAGCACGGCTGCCGGGGTCAGCGCGGGGCTCGGCAACGCCGTGCTATCCGCGGCGATCGCTGGCGTGGTGTCGAG CAGCGCTAGCCAGTTGGTCGGTACGGGCAAGCTGGATCTTGGCAGCGCGTTCGAGGCGGGCGCAGTGGCCGCGATCACGG CCGGGCTGATGAACGGCATTACCTACAGCAATCAGTCGGGGCTCGGGTTTACGACTTCGCCGATCGCGAGCGGATCTGGC GTGCAAAGCCTTGGGAGCCTGGCCGGCGTGCAGCCGGTGATGGGTACCTCGGTGAATCAGGCTGCCAGTTCGACGGCCAC GCTCATCGAAGAGCGCGGGCTGGCCATGCTGGCCAGTGGCGTGATCAACGCCGGCGTGGGGACGGCGATCGAGGGCGGGA GCTTCCTCAGCGCGCTGAAGGGTTCGCTGGTCAGCGAAGTGGCGGCGGTGGGGGCCAATGCGATCGGCGATGAGGCGAAT GTGAAGGGCTCGCCGATCGAGGCCGGGTCACCAGCGTATTGGCTCGCGCATGCGGCGCTGGGATGTGCCAGCTCGGCAGC GCTCGGAACCGGGTGCGCGGGTGGGGCGATTGGCGGGGCCGCCAGTGCAGCGTTCTCGCCAGATTTCATCAAGGCGATTG ACCCGACAGCTGCAGTGCTCGATTCGGGGCAGCAGGCAGCGTTGGCTGGGTTCGCGACGCTGCTGGGCGGGGGCCTGGCC GGACTGGCTGGTGCGAACGTGCAAGGTGCGGCGACGGCGGCGCAGAACGAAGCGCTGAACAATTCAGGCGCACCCGGGCA TCAGGGAGGCGTTCATCTTCATTTCAATCCAGATGGCACTGAAAGTTTGTCCAGCGAGATCGAGAAAGATGCTGTCCCGA TCGTCCCACAAGGCATGTCCTCGGTCCAAGACGAAGAGAATGACAACTTTGTTGTAGGCGCAGGGCCACTCGTCGGAGGG CTGGGTAGTGGTGCCGCCACAAACAGTGGGACAGTAGGTGCAGTTTCAGCGCAGAATGTCGCAACTGCTAGTCAGTTGGC GCAACAGTTGCAGCTTGAGTCGGCTAATTCGCCGTTCACGGTAAGTGGTACGCTGACGCAAGGAGCCATCGACAGTTCAA CACAGATATTTCCTCCCGGCAGCATGGGCAATCCGGCGATACCGGAAGGCTTCGGTAAATATACGACGAGTACGTATCAG AGTCCGGCAGGCAATTTCCAGGTTCACTTCTATATGAATCCGACGACTGGACAGGTGTATTACGGACTAGACTACAAGGC GATCTTCAACAATGTTTCGGGCGTGCCCAAGTAG
Upstream 100 bases:
>100_bases TGCTGGTATTGGGCTTGAGGCGGTGCACGAAAAATTGTAACGAACCGATGCCGAACTCAGCCGATCAGCCTGAAAGCCAA GCGTAGCAAGGCTTTGCGCG
Downstream 100 bases:
>100_bases CCATGAAAGTTAAATGCGTAAAGCTGTTAGACGCGTGTGGGCGAGAGGTGGATGATTCGCCTTGGTTGACGCTTGAGCGT GTGTACCCTGTGTTTGGAAT
Product: Adhesin HecA family protein
Products: NA
Alternate protein names: Adhesin HecA; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Hemagglutinin Family Outer Membrane Protein; Adhesin; Adhesin HecA Family Protein; Metalloendopeptidase; Filamentous Haemagglutinin Adhesin HecA
Number of amino acids: Translated: 917; Mature: 917
Protein sequence:
>917_residues MVKIAPHGVHRRSRYSIICSDKRHDIWACGSVAECTALYGRAYTNSGGQIDPPTPVGNIAATIQAPNLSITSGGQIQNVG NVIGTAVSLTGQKLINGITRPNTYTPTVSAPQRVITLSPATLPGLNLSIPRTIGTGSIPTPVAGTASYVDGSLGSSGIGN LGPQNLLSNLPATLQPSATLFYYNPQEEDLLLQQASLQQTGKASFIDGLSTDSKSGMSVVEQEKAYLYQNAIDYAKQNNL QLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTAAMTAGGNITGGNVALNFNTDGNGS ILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSAANMELNVQRLNQIGGALQQLNRDG GVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAASLATYGAASAAIGTALGAAGGTFA TASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGLMNGITYSNQSGLGFTTSPIASGSG VQSLGSLAGVQPVMGTSVNQAASSTATLIEERGLAMLASGVINAGVGTAIEGGSFLSALKGSLVSEVAAVGANAIGDEAN VKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGAASAAFSPDFIKAIDPTAAVLDSGQQAALAGFATLLGGGLA GLAGANVQGAATAAQNEALNNSGAPGHQGGVHLHFNPDGTESLSSEIEKDAVPIVPQGMSSVQDEENDNFVVGAGPLVGG LGSGAATNSGTVGAVSAQNVATASQLAQQLQLESANSPFTVSGTLTQGAIDSSTQIFPPGSMGNPAIPEGFGKYTTSTYQ SPAGNFQVHFYMNPTTGQVYYGLDYKAIFNNVSGVPK
Sequences:
>Translated_917_residues MVKIAPHGVHRRSRYSIICSDKRHDIWACGSVAECTALYGRAYTNSGGQIDPPTPVGNIAATIQAPNLSITSGGQIQNVG NVIGTAVSLTGQKLINGITRPNTYTPTVSAPQRVITLSPATLPGLNLSIPRTIGTGSIPTPVAGTASYVDGSLGSSGIGN LGPQNLLSNLPATLQPSATLFYYNPQEEDLLLQQASLQQTGKASFIDGLSTDSKSGMSVVEQEKAYLYQNAIDYAKQNNL QLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTAAMTAGGNITGGNVALNFNTDGNGS ILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSAANMELNVQRLNQIGGALQQLNRDG GVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAASLATYGAASAAIGTALGAAGGTFA TASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGLMNGITYSNQSGLGFTTSPIASGSG VQSLGSLAGVQPVMGTSVNQAASSTATLIEERGLAMLASGVINAGVGTAIEGGSFLSALKGSLVSEVAAVGANAIGDEAN VKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGAASAAFSPDFIKAIDPTAAVLDSGQQAALAGFATLLGGGLA GLAGANVQGAATAAQNEALNNSGAPGHQGGVHLHFNPDGTESLSSEIEKDAVPIVPQGMSSVQDEENDNFVVGAGPLVGG LGSGAATNSGTVGAVSAQNVATASQLAQQLQLESANSPFTVSGTLTQGAIDSSTQIFPPGSMGNPAIPEGFGKYTTSTYQ SPAGNFQVHFYMNPTTGQVYYGLDYKAIFNNVSGVPK >Mature_917_residues MVKIAPHGVHRRSRYSIICSDKRHDIWACGSVAECTALYGRAYTNSGGQIDPPTPVGNIAATIQAPNLSITSGGQIQNVG NVIGTAVSLTGQKLINGITRPNTYTPTVSAPQRVITLSPATLPGLNLSIPRTIGTGSIPTPVAGTASYVDGSLGSSGIGN LGPQNLLSNLPATLQPSATLFYYNPQEEDLLLQQASLQQTGKASFIDGLSTDSKSGMSVVEQEKAYLYQNAIDYAKQNNL QLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTAAMTAGGNITGGNVALNFNTDGNGS ILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSAANMELNVQRLNQIGGALQQLNRDG GVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAASLATYGAASAAIGTALGAAGGTFA TASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGLMNGITYSNQSGLGFTTSPIASGSG VQSLGSLAGVQPVMGTSVNQAASSTATLIEERGLAMLASGVINAGVGTAIEGGSFLSALKGSLVSEVAAVGANAIGDEAN VKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGAASAAFSPDFIKAIDPTAAVLDSGQQAALAGFATLLGGGLA GLAGANVQGAATAAQNEALNNSGAPGHQGGVHLHFNPDGTESLSSEIEKDAVPIVPQGMSSVQDEENDNFVVGAGPLVGG LGSGAATNSGTVGAVSAQNVATASQLAQQLQLESANSPFTVSGTLTQGAIDSSTQIFPPGSMGNPAIPEGFGKYTTSTYQ SPAGNFQVHFYMNPTTGQVYYGLDYKAIFNNVSGVPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91590; Mature: 91590
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIAPHGVHRRSRYSIICSDKRHDIWACGSVAECTALYGRAYTNSGGQIDPPTPVGNIA CEEECCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHEECCCCCCCCCCCCCCEE ATIQAPNLSITSGGQIQNVGNVIGTAVSLTGQKLINGITRPNTYTPTVSAPQRVITLSPA EEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC TLPGLNLSIPRTIGTGSIPTPVAGTASYVDGSLGSSGIGNLGPQNLLSNLPATLQPSATL CCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEE FYYNPQEEDLLLQQASLQQTGKASFIDGLSTDSKSGMSVVEQEKAYLYQNAIDYAKQNNL EEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC QLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTAAMTA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCEEEEC GGNITGGNVALNFNTDGNGSILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGY CCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHCCCE LDTTGTTVQPGGFMSAANMELNVQRLNQIGGALQQLNRDGGVDQAGTQALLAQLQSTLGG EECCCCEECCCCCEEECCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC NFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAASLATYGAASAAIGTALGAAGGTFA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC TASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGLMNGI HHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCC TYSNQSGLGFTTSPIASGSGVQSLGSLAGVQPVMGTSVNQAASSTATLIEERGLAMLASG EECCCCCCCEECCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHH VINAGVGTAIEGGSFLSALKGSLVSEVAAVGANAIGDEANVKGSPIEAGSPAYWLAHAAL HHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GCASSAALGTGCAGGAIGGAASAAFSPDFIKAIDPTAAVLDSGQQAALAGFATLLGGGLA HHCCCHHCCCCCCCCCCCCCHHCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCHH GLAGANVQGAATAAQNEALNNSGAPGHQGGVHLHFNPDGTESLSSEIEKDAVPIVPQGMS HHCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHH SVQDEENDNFVVGAGPLVGGLGSGAATNSGTVGAVSAQNVATASQLAQQLQLESANSPFT HHCCCCCCCEEEECCHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEE VSGTLTQGAIDSSTQIFPPGSMGNPAIPEGFGKYTTSTYQSPAGNFQVHFYMNPTTGQVY EEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE YGLDYKAIFNNVSGVPK ECCCHHHHHHCCCCCCC >Mature Secondary Structure MVKIAPHGVHRRSRYSIICSDKRHDIWACGSVAECTALYGRAYTNSGGQIDPPTPVGNIA CEEECCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHEECCCCCCCCCCCCCCEE ATIQAPNLSITSGGQIQNVGNVIGTAVSLTGQKLINGITRPNTYTPTVSAPQRVITLSPA EEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC TLPGLNLSIPRTIGTGSIPTPVAGTASYVDGSLGSSGIGNLGPQNLLSNLPATLQPSATL CCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEE FYYNPQEEDLLLQQASLQQTGKASFIDGLSTDSKSGMSVVEQEKAYLYQNAIDYAKQNNL EEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC QLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTAAMTA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCEEEEC GGNITGGNVALNFNTDGNGSILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGY CCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHCCCE LDTTGTTVQPGGFMSAANMELNVQRLNQIGGALQQLNRDGGVDQAGTQALLAQLQSTLGG EECCCCEECCCCCEEECCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC NFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAASLATYGAASAAIGTALGAAGGTFA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC TASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGLMNGI HHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCC TYSNQSGLGFTTSPIASGSGVQSLGSLAGVQPVMGTSVNQAASSTATLIEERGLAMLASG EECCCCCCCEECCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHH VINAGVGTAIEGGSFLSALKGSLVSEVAAVGANAIGDEANVKGSPIEAGSPAYWLAHAAL HHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GCASSAALGTGCAGGAIGGAASAAFSPDFIKAIDPTAAVLDSGQQAALAGFATLLGGGLA HHCCCHHCCCCCCCCCCCCCHHCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCHH GLAGANVQGAATAAQNEALNNSGAPGHQGGVHLHFNPDGTESLSSEIEKDAVPIVPQGMS HHCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHH SVQDEENDNFVVGAGPLVGGLGSGAATNSGTVGAVSAQNVATASQLAQQLQLESANSPFT HHCCCCCCCEEEECCHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEE VSGTLTQGAIDSSTQIFPPGSMGNPAIPEGFGKYTTSTYQSPAGNFQVHFYMNPTTGQVY EEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE YGLDYKAIFNNVSGVPK ECCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA