| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024227
Identifier: 238024227
GI number: 238024227
Start: 984225
End: 985811
Strand: Reverse
Name: 238024227
Synonym: bglu_2g08080
Alternate gene names: NA
Gene position: 985811-984225 (Counterclockwise)
Preceding gene: 238024228
Following gene: 238024220
Centisome position: 34.87
GC content: 62.82
Gene sequence:
>1587_bases ATGGACGAACATGACTTCTCGCAATTGCCGTCGGCCGCTCAGGCCTATATCCGAGAACTGGAGGCGCGCAACCGACAACT AGGCGAACGCATCGCCCAGTTGGAGGAGCAGTTCCGCTTGGCGCAGAGCAAACGCTTCGCACCGAGCAGCGAGAAGCTGA AGGACCGCGTATTCGACGAGGCCGAGCAGATGGCTGCGGCAGCGCCATCGGAGGACCCCGACGACGACGCGTTCGCGTTG CCGGACACAGGGCTGCCCGCACCCGATGAGCCAGAGCGGGGCAAGCGAGGCCGCAAACCGTTGCCGGCCGAGCTGCCGCG CCAGCGCATTGAATACGATCTACCCGACGATGAGAAGGTCTGCCCCTGCTGCCGCAGCGCGATGCATCGCATGGGCGAAG AAGTCAGCGAGCAACTGCACTTCGAAGTGAAAGCCTCTGTGCTGCAGCACGTTCGCTTCAAGTACGCATGTCGCCACTGC GAGCGCAATGCCGAGAGCACGCCGATCGTGACCGCCCCGATGCCGGCGCAGCCGCTGCCGGGCAGCAATGCGAGCGCAGC GCTCATCGCCACCGTGACGGCGGGCAAATATGTCGATGGCACGCCGCTATACCGCATGGAGGATGCGCTCTCGCGCGCGA ACATCGCGGTGGGCCGCGGCACGCTGGCCAACTGGATCATCCGGCCCGCTCAACTGCACTACAGCCGACTGTACGAGGCC TTGCGCCAAACGCTGCTATCGCAACAGTTGATTCACGGCGACGAGACGACGGTGCAGGTTCTCAAAGAACCGGGCAAGAC CGCGCAAAGCACCTCGTATATGTGGGTCTATCGCAGTGCCGAGCAATGCGAGCAGCCGGTGGTGCTGTTCGACTACCAGC CAGGGCGCGGCCAAGAGTATCCGCAAGCGTTCCTGGCCGGATACACGGGCATGCTGATGAGTGACGGCTACGCTGCGTGG CGCACGCTCGACGCAGCGACGCACTTGGGCTGCCTTGCCCACGCCCGTAGGGCGTTCGTCGATGCGCTCAAAGGTCAGAA GAAGCCCGGTGGGCGTGCGGCACAGGCTCTTGAGTACTTCAAGGCGTTGTATCAGGTCGAGACGCTCGCCAAGGGCGGTC TGCCCGAAGGAGAAACCCGCGACGATTACACGTACCGATTACGCCAGGAACATAGCGTGCCGTTGCTCACTGCATTCAAG ACCTGGCTGGACGAGCAGGCGCCACACGTGTTGCCCGAAAGTCTGCTGGGCAAGGCGATCAGCTATACGCGCAATCAATG GGAGTATCTGAGCCGCTACGTCATCGACGGCCGCGCCCCAATCGACAATAACGTTATCGAACGCGACATCAGGCCCTTCT GCACAGGCCGCAAATCTTGGCTGTTCAGCGACACGGTCGCTGGCGCGAAGGCGAGCGCAATGGTCTACAGTCTCATGCTC ACGTGCCGCGCATGCAACGTCGAGCCGTATGCCTACCTGCTTCATGTGCTCACCGAACTGCCTCAGCGAGCCCCGGATGC CGACATCACGGACTTGCTGCCGTTCAACTTCGCGAAACGGCAAACGGCTACACCGCCGCCGCCTTGA
Upstream 100 bases:
>100_bases AAGGCGGCGCCAACTGATGTTGTCGGTAAACAACGCGCGCGACGGTTGTTGCCCATTTCCGTAAACCCACTGGGCGCGCC GCTCCGGTATGGTGAGCGGC
Downstream 100 bases:
>100_bases TCGATCGAGCGCATAGCTTCGGCCCGACCGTCAACGTGTGGCGAATTGAGCGCTTACGATCCTCTTCCTGCGGGTTGTAG TAGAACAGCGCCGCACTCGG
Product: transposase IS66
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDDAFAL PDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHC ERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDGYAAW RTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFK TWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
Sequences:
>Translated_528_residues MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDDAFAL PDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHC ERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDGYAAW RTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFK TWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP >Mature_528_residues MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDDAFAL PDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHC ERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDGYAAW RTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFK TWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 59222; Mature: 59222
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDE CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AEQMAAAAPSEDPDDDAFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKV HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC CPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHCERNAESTPIVTAPMPAQPLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC GSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEY HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCEEEEECCCCCCCHH PQAFLAGYTGMLMSDGYAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFKTWLDEQAPHVLPESLLGKAI HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH SYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCEEEHHHHCCCHHHHHHHHHHH TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCC >Mature Secondary Structure MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDE CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AEQMAAAAPSEDPDDDAFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKV HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC CPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHCERNAESTPIVTAPMPAQPLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC GSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEY HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCEEEEECCCCCCCHH PQAFLAGYTGMLMSDGYAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFKTWLDEQAPHVLPESLLGKAI HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH SYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCEEEHHHHCCCHHHHHHHHHHH TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]