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The map label for this gene is shlB [H]

Identifier: 238024222

GI number: 238024222

Start: 967331

End: 969097

Strand: Direct

Name: shlB [H]

Synonym: bglu_2g08030

Alternate gene names: 238024222

Gene position: 967331-969097 (Clockwise)

Preceding gene: 238024221

Following gene: 238024223

Centisome position: 34.21

GC content: 71.14

Gene sequence:

>1767_bases
ATGAGCGTGCGTCACGCAGTTTCGCTGGCTGTTTGCCTCGGCATGCTGTCGCCCTGCGCGTTCGCGCAGTTCGCGGGCCT
GCCGGCGGCGCGCGTCGAGCAGGATCCGGCGCAGCGGCTGCTGCAGGAGCAACGCGATCGCCAGCAGCGCAACGAGGTGC
AGCAGGCGCCCGCGCAGATCGCGGTGCCGGCGCCCGCCTTGCCGGACCTGCCGGCCGACGCGGACGTGGGCACGCTGCCT
GAGGTCGCGCCGACCTTCATGATCCGCCATATCGAATTCAGCGGCGACACGGTGCTGTCCGAGCGCGAGCTCGCGCGCAT
CGCGCGGCCGTTCCTCTACCACCAGCTGGGCCGCAACCGCATCAACCTGCTGCTGCGCCGCCTGACCGAGGCCTTCATCG
CGCACGGCTACATCACCACGCGCGCCTACCTGGGCGCGCAGAACCTCGCGGCTGGCACGCTCACGATCCGCATCGTGGCC
GGCAGGGTGGCCGCGTTCACGCTGAACGGCAAGCCGCTGCGCCCGCGCGACCCGGCGCAGCCGTGGTGGCGGCACGATGG
CGGCGGCCTGCTGACCGACGCCGGCACGGCCGGGGCGTTCGCGGCGTCCCCGGGCGACGTGCTGCGCCTGCCCGATCTCG
AGCAGGGCGTGGAGCAGATCAACCGGCTGCGGCGCAACCAGGCCGAGTTGCAGATCATGCCCGGCGAGACGCCTGGCGAT
TCGGTGGTGGCCCTGAGCAATCGCGTGGGCGACCGCCTCTACTACAACCTCGGCATCGACAACTACGGCAGCTCGCAGAC
GGGCACGATGCGCTATCGCGGCGGCGTCGAGGCCGACAACCTGCTGGGCCTGCAGGAGTCGCTGGCGTTCAACTACGTCG
GCACCACCGACAGCAACGCGCTCGTGGCGTCGGCCGCGGTGCCCTACGGCTATCAGACCTTCAGCTATACCACCTCGCTG
TCCGAATACCAGCAGACCATCGGCAACGTCGCGCTGCTCACGGGCCGCTCGTTCAGCCAGATCTTCGGCTGGAACGACGT
GCTGAGCCGCTCGCGTGCCGGGCGGACCAGCCTGGACCTGACCTTCAGCAAGACGCGCACCCAGCGCAGCGTAAACGGCA
TCGACCTCGCCGAGCAGGACCTGAGCGTGTTGCGCGTCGCGCTGAACGGCCTGGTGCGCTTCGTCGCCCACGACCAGCAG
GCCGCGGCCACCTGGGACGTCGGCGTCTCGCAGGGGCTGCCGTGGCTCGGCGCCTCGCACGACGCGCCGGACAGCGGCGT
GGCCGACGCGCACAGCCAGTTCACCCGGCTCGACGCGACGGCCACGGTGCAGTTCGCGCTCGGCTCGCTGGGCGCCACGC
GCTGGGCCTATCGCGGCACGCTGCGCGGCCAGTACAGCCGCGTCGCGCTGTTCGGCAACCAACAGATCTTCCTGGGCGGG
ATGGATTCGGTGCGCGGCTTCACCGAAGGCGGCATCAGCGGCGACAGCGGCGTGTTCGCGCGCAACGAGGCCGCATGGCA
GAACGTGCCGGCCTGGCATGGCGCGCGTGTCGAGCCGTATGTGTTCATCGACGCCGGCAAGGCGCACCTGGTGGCGCAGG
GCGGCTGGCCCACGCTGGCGGGGGCGGGCGTCGGCGCGCGCGCGGTATGGAATGTCAGGCAGCAGAGCGTGACGGGCGAG
CTGCTGCTCGGCCAGGCACTGCTGCAGCCCGCCTTGCTGGGACGCAAGGCGACGGTGGTGCTGGCCACACTGAACTGGAC
GGAGTGA

Upstream 100 bases:

>100_bases
TCACGGCGGCGGGCGGCATCGTCACGCTGCGCGCGCCGCGCCGCGATCCGGTCACGATCGGCGCGGGCAACCATCTCGGC
CTGGTGTCCTGGTTCGGGCT

Downstream 100 bases:

>100_bases
CGGAGACGGCGGGGCAATGATGATCGGAATGACGAAGCAGGATGCGACCAAGCTGGAGTACCGCGAACGACCGGGCCGCG
CAAGGCGTGTGGCCGGTGCC

Product: polypeptide-transport-associated domain-containing protein ShlB-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MSVRHAVSLAVCLGMLSPCAFAQFAGLPAARVEQDPAQRLLQEQRDRQQRNEVQQAPAQIAVPAPALPDLPADADVGTLP
EVAPTFMIRHIEFSGDTVLSERELARIARPFLYHQLGRNRINLLLRRLTEAFIAHGYITTRAYLGAQNLAAGTLTIRIVA
GRVAAFTLNGKPLRPRDPAQPWWRHDGGGLLTDAGTAGAFAASPGDVLRLPDLEQGVEQINRLRRNQAELQIMPGETPGD
SVVALSNRVGDRLYYNLGIDNYGSSQTGTMRYRGGVEADNLLGLQESLAFNYVGTTDSNALVASAAVPYGYQTFSYTTSL
SEYQQTIGNVALLTGRSFSQIFGWNDVLSRSRAGRTSLDLTFSKTRTQRSVNGIDLAEQDLSVLRVALNGLVRFVAHDQQ
AAATWDVGVSQGLPWLGASHDAPDSGVADAHSQFTRLDATATVQFALGSLGATRWAYRGTLRGQYSRVALFGNQQIFLGG
MDSVRGFTEGGISGDSGVFARNEAAWQNVPAWHGARVEPYVFIDAGKAHLVAQGGWPTLAGAGVGARAVWNVRQQSVTGE
LLLGQALLQPALLGRKATVVLATLNWTE

Sequences:

>Translated_588_residues
MSVRHAVSLAVCLGMLSPCAFAQFAGLPAARVEQDPAQRLLQEQRDRQQRNEVQQAPAQIAVPAPALPDLPADADVGTLP
EVAPTFMIRHIEFSGDTVLSERELARIARPFLYHQLGRNRINLLLRRLTEAFIAHGYITTRAYLGAQNLAAGTLTIRIVA
GRVAAFTLNGKPLRPRDPAQPWWRHDGGGLLTDAGTAGAFAASPGDVLRLPDLEQGVEQINRLRRNQAELQIMPGETPGD
SVVALSNRVGDRLYYNLGIDNYGSSQTGTMRYRGGVEADNLLGLQESLAFNYVGTTDSNALVASAAVPYGYQTFSYTTSL
SEYQQTIGNVALLTGRSFSQIFGWNDVLSRSRAGRTSLDLTFSKTRTQRSVNGIDLAEQDLSVLRVALNGLVRFVAHDQQ
AAATWDVGVSQGLPWLGASHDAPDSGVADAHSQFTRLDATATVQFALGSLGATRWAYRGTLRGQYSRVALFGNQQIFLGG
MDSVRGFTEGGISGDSGVFARNEAAWQNVPAWHGARVEPYVFIDAGKAHLVAQGGWPTLAGAGVGARAVWNVRQQSVTGE
LLLGQALLQPALLGRKATVVLATLNWTE
>Mature_587_residues
SVRHAVSLAVCLGMLSPCAFAQFAGLPAARVEQDPAQRLLQEQRDRQQRNEVQQAPAQIAVPAPALPDLPADADVGTLPE
VAPTFMIRHIEFSGDTVLSERELARIARPFLYHQLGRNRINLLLRRLTEAFIAHGYITTRAYLGAQNLAAGTLTIRIVAG
RVAAFTLNGKPLRPRDPAQPWWRHDGGGLLTDAGTAGAFAASPGDVLRLPDLEQGVEQINRLRRNQAELQIMPGETPGDS
VVALSNRVGDRLYYNLGIDNYGSSQTGTMRYRGGVEADNLLGLQESLAFNYVGTTDSNALVASAAVPYGYQTFSYTTSLS
EYQQTIGNVALLTGRSFSQIFGWNDVLSRSRAGRTSLDLTFSKTRTQRSVNGIDLAEQDLSVLRVALNGLVRFVAHDQQA
AATWDVGVSQGLPWLGASHDAPDSGVADAHSQFTRLDATATVQFALGSLGATRWAYRGTLRGQYSRVALFGNQQIFLGGM
DSVRGFTEGGISGDSGVFARNEAAWQNVPAWHGARVEPYVFIDAGKAHLVAQGGWPTLAGAGVGARAVWNVRQQSVTGEL
LLGQALLQPALLGRKATVVLATLNWTE

Specific function: Member of a two partner secretion pathway (TPS) in which it mediates the secretion of hemolysin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005565
- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2; PF03865 ShlB [H]

EC number: NA

Molecular weight: Translated: 63341; Mature: 63210

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRHAVSLAVCLGMLSPCAFAQFAGLPAARVEQDPAQRLLQEQRDRQQRNEVQQAPAQI
CCHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
AVPAPALPDLPADADVGTLPEVAPTFMIRHIEFSGDTVLSERELARIARPFLYHQLGRNR
EECCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHH
INLLLRRLTEAFIAHGYITTRAYLGAQNLAAGTLTIRIVAGRVAAFTLNGKPLRPRDPAQ
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEECEEEEEEECCCCCCCCCCCC
PWWRHDGGGLLTDAGTAGAFAASPGDVLRLPDLEQGVEQINRLRRNQAELQIMPGETPGD
CCCEECCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
SVVALSNRVGDRLYYNLGIDNYGSSQTGTMRYRGGVEADNLLGLQESLAFNYVGTTDSNA
CEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHCHHHHHEEEEECCCCCCC
LVASAAVPYGYQTFSYTTSLSEYQQTIGNVALLTGRSFSQIFGWNDVLSRSRAGRTSLDL
EEEEECCCCCCEEEEEHHHHHHHHHHHCCEEEEECCCHHHHCCCHHHHHHCCCCCCEEEE
TFSKTRTQRSVNGIDLAEQDLSVLRVALNGLVRFVAHDQQAAATWDVGVSQGLPWLGASH
EEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCEEECCHHHCCCCCCCCCC
DAPDSGVADAHSQFTRLDATATVQFALGSLGATRWAYRGTLRGQYSRVALFGNQQIFLGG
CCCCCCCCHHHHHHHHCCCCEEEEHHHHCCCCHHHHHCCCCCCCCEEEEEECCCEEEEEC
MDSVRGFTEGGISGDSGVFARNEAAWQNVPAWHGARVEPYVFIDAGKAHLVAQGGWPTLA
CHHHCCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCC
GAGVGARAVWNVRQQSVTGELLLGQALLQPALLGRKATVVLATLNWTE
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
>Mature Secondary Structure 
SVRHAVSLAVCLGMLSPCAFAQFAGLPAARVEQDPAQRLLQEQRDRQQRNEVQQAPAQI
CHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
AVPAPALPDLPADADVGTLPEVAPTFMIRHIEFSGDTVLSERELARIARPFLYHQLGRNR
EECCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHH
INLLLRRLTEAFIAHGYITTRAYLGAQNLAAGTLTIRIVAGRVAAFTLNGKPLRPRDPAQ
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEECEEEEEEECCCCCCCCCCCC
PWWRHDGGGLLTDAGTAGAFAASPGDVLRLPDLEQGVEQINRLRRNQAELQIMPGETPGD
CCCEECCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
SVVALSNRVGDRLYYNLGIDNYGSSQTGTMRYRGGVEADNLLGLQESLAFNYVGTTDSNA
CEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHCHHHHHEEEEECCCCCCC
LVASAAVPYGYQTFSYTTSLSEYQQTIGNVALLTGRSFSQIFGWNDVLSRSRAGRTSLDL
EEEEECCCCCCEEEEEHHHHHHHHHHHCCEEEEECCCHHHHCCCHHHHHHCCCCCCEEEE
TFSKTRTQRSVNGIDLAEQDLSVLRVALNGLVRFVAHDQQAAATWDVGVSQGLPWLGASH
EEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCEEECCHHHCCCCCCCCCC
DAPDSGVADAHSQFTRLDATATVQFALGSLGATRWAYRGTLRGQYSRVALFGNQQIFLGG
CCCCCCCCHHHHHHHHCCCCEEEEHHHHCCCCHHHHHCCCCCCCCEEEEEECCCEEEEEC
MDSVRGFTEGGISGDSGVFARNEAAWQNVPAWHGARVEPYVFIDAGKAHLVAQGGWPTLA
CHHHCCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCC
GAGVGARAVWNVRQQSVTGELLLGQALLQPALLGRKATVVLATLNWTE
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3290200 [H]