| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fhaB [H]
Identifier: 238024221
GI number: 238024221
Start: 965175
End: 967334
Strand: Direct
Name: fhaB [H]
Synonym: bglu_2g08020
Alternate gene names: 238024221
Gene position: 965175-967334 (Clockwise)
Preceding gene: 238024219
Following gene: 238024222
Centisome position: 34.14
GC content: 68.75
Gene sequence:
>2160_bases ATGAAGACAAGAGAGTGGGCCGGACACGCGGGCGGGGGCTTGCGCGTGCTGGGGAAAATGGTGATCGTCGCGTCGATGCT CGCGCCGCTGGCGGCGGCCGCTGCCGGCATCGTGCCGGACGGTGGTACGCAGACTAGCGTGTCGGCCGGAGCCGGCGGCC GACAGATCGTCAACATCGCGCCCGCGGTGGCAGGCGTGTCGCAAAACACCTACAGCAGCTTCAACGTGTCGACGGCGGGC GCCTCGCTCAACAACGTCGGCATCAACGCGCGCACCATCGTCAACCAGGTGACGGGCACCGACCGCAGCCTGATCGAAGG CAACATCGACGTGCTCGGCAGCACGCGCGCCAACGTGATCCTCGCCAATCCGAACGGCATCACGGTCAATGGCGGCTCGT TCACGAACACCGGCCACGTGGTGCTGTCGACCGGCAACGTGTCGTTCGACGACATCGCCATTGCCCCCGGCGTGATTCGC CGCGACGTGGTGCTCGACACCCATACCGGCACCATCGTGGTGGGCCCGAACGGGCTGACCAGCGCGCTGATCTCGCTCGA CCTGATCGCCAAGAACCTGCTGATCGAAGGCCCGGTCAACAACACCTTCAGCTCCAGCACGGCCGGGCTGCGCCTGCTGG CCGGCACGAGCCGCGTGCAGCTCGACACCAGCATTTCGCCGACCGACAATGCCAACGACTGGCTGACCCGCTTCACGCCG TCCAGCACCGACACCGCGACATCATTCGCGATCGACATCACGGCGGCCGGCAGCCTGACGAGCGGCCGCGTGCAGCTGAT CGTGAACGACCGCGGGCCCGGCGTGCGCAGCGCGGGGCCGCTGAACGCCTCGCTCGGCGACTTCACGCTGTCGTCGAACG GCAGCGTGCAATTCTCCGAGACCTCGCTTGCGGCGGCCGGCAACGCCGAATTCGACGTGCGCGACGCGTTCTCGATGGCC GACACGCAGCTGAAGGCCCGCGCGGGCCACGTGGCGCTCACGGCCAGCGGGCCGCTCACGCTGCTCGGCAGCGGCATCCT CGCCAACGACGACATCAAGCTGGCGGCCAACGGCATGCTGTTCGGGCCGAGCGTGGCGGCGGCCGGCTCCACCATCGCGT CGGCGTCGGGCGGCGTGGTGCTGAAGAGCGGCGGCGACATCGCCAGCACCGGCACGCTCGTGCAGGGACAGAAGGCGATC GCCGGCGATACGGATTCGCGCGGCGCCGTCACGCTCACGGCGGCTGGCTCGATCGTCAATCAATCGCTGCCGAGCACCCA GCTCGGCATCCTGTTCGGCGTGGCGGGCGACGTGTGGCTGAGCGCCGGCGGCGGCGTGACCAACCGAAATGCGCGGATCC TGTCGAATCAGAACGTGTCGATTGCCGCGGGCGGCGACGTGCTCAACGTGGTCGATCACACCCCGGGCGCGGACGACGGC GCGCAGATCCCCTATTCGTCGCGCGGCAGCAGCTTCCTGTTCCTCACGCATCGCACCAGCGGCTTCACGGTGGATTACGG CGAGATCGTCGATCCGGCCAAGCTCGCCTACATCACCGCAGAAGCGGGCAACGTGACGATCCGCGGGGCCAACGTGGTCA ACACGGGCGGCTCGATCGTGTCGAACGACGGGGCGATCGACATCGCGGCACTCGGCTCGCTGACGACGCAGGCGGTGTTC ACGGGCCGGGCGCAGCTCGAGCGCTCCTGCTTCGTCTTCTGCCATTCGCGCGCGTCCAGCACAGTGCAGGCGCTCGGCGG CGTGATCGAGGCCGGCACGGACATCACGCTGAAGGCCGGCAAGCAGATCACCAACATCGGCGGCATGGTGTACGCGATCC ACAATCTGCGCCTCGACGCGCCGGTGACGCTGGCTCAGGCGGTGCTCGGCTACAGCACGATCAATCGCACGAGCGATCTG AAGGCCTGGTTCGGCAACAGCTGGGCCGCGATCTACGCGACCGACACGGGCGGCATCTTCGACAGCGAGTTGGGCCAGGT GGCGTTGACCGGCGAAGGGCGCATCGACGGGGGCGCGTTCAACGCGCCGGGCGGCGTCACGGCGGCGGGCGGCATCGTCA CGCTGCGCGCGCCGCGCCGCGATCCGGTCACGATCGGCGCGGGCAACCATCTCGGCCTGGTGTCCTGGTTCGGGCTATGA
Upstream 100 bases:
>100_bases TCCGTTAAGATCCGGGCGACGGCGAGGCCAGCGTTTCTCCGTCAAGAAAAAATCAATAGATGCGCACGAACGCCGAACGG CGCGTGCTAGACCGTGAAAA
Downstream 100 bases:
>100_bases GCGTGCGTCACGCAGTTTCGCTGGCTGTTTGCCTCGGCATGCTGTCGCCCTGCGCGTTCGCGCAGTTCGCGGGCCTGCCG GCGGCGCGCGTCGAGCAGGA
Product: Filamentous hemagglutinin family outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MKTREWAGHAGGGLRVLGKMVIVASMLAPLAAAAAGIVPDGGTQTSVSAGAGGRQIVNIAPAVAGVSQNTYSSFNVSTAG ASLNNVGINARTIVNQVTGTDRSLIEGNIDVLGSTRANVILANPNGITVNGGSFTNTGHVVLSTGNVSFDDIAIAPGVIR RDVVLDTHTGTIVVGPNGLTSALISLDLIAKNLLIEGPVNNTFSSSTAGLRLLAGTSRVQLDTSISPTDNANDWLTRFTP SSTDTATSFAIDITAAGSLTSGRVQLIVNDRGPGVRSAGPLNASLGDFTLSSNGSVQFSETSLAAAGNAEFDVRDAFSMA DTQLKARAGHVALTASGPLTLLGSGILANDDIKLAANGMLFGPSVAAAGSTIASASGGVVLKSGGDIASTGTLVQGQKAI AGDTDSRGAVTLTAAGSIVNQSLPSTQLGILFGVAGDVWLSAGGGVTNRNARILSNQNVSIAAGGDVLNVVDHTPGADDG AQIPYSSRGSSFLFLTHRTSGFTVDYGEIVDPAKLAYITAEAGNVTIRGANVVNTGGSIVSNDGAIDIAALGSLTTQAVF TGRAQLERSCFVFCHSRASSTVQALGGVIEAGTDITLKAGKQITNIGGMVYAIHNLRLDAPVTLAQAVLGYSTINRTSDL KAWFGNSWAAIYATDTGGIFDSELGQVALTGEGRIDGGAFNAPGGVTAAGGIVTLRAPRRDPVTIGAGNHLGLVSWFGL
Sequences:
>Translated_719_residues MKTREWAGHAGGGLRVLGKMVIVASMLAPLAAAAAGIVPDGGTQTSVSAGAGGRQIVNIAPAVAGVSQNTYSSFNVSTAG ASLNNVGINARTIVNQVTGTDRSLIEGNIDVLGSTRANVILANPNGITVNGGSFTNTGHVVLSTGNVSFDDIAIAPGVIR RDVVLDTHTGTIVVGPNGLTSALISLDLIAKNLLIEGPVNNTFSSSTAGLRLLAGTSRVQLDTSISPTDNANDWLTRFTP SSTDTATSFAIDITAAGSLTSGRVQLIVNDRGPGVRSAGPLNASLGDFTLSSNGSVQFSETSLAAAGNAEFDVRDAFSMA DTQLKARAGHVALTASGPLTLLGSGILANDDIKLAANGMLFGPSVAAAGSTIASASGGVVLKSGGDIASTGTLVQGQKAI AGDTDSRGAVTLTAAGSIVNQSLPSTQLGILFGVAGDVWLSAGGGVTNRNARILSNQNVSIAAGGDVLNVVDHTPGADDG AQIPYSSRGSSFLFLTHRTSGFTVDYGEIVDPAKLAYITAEAGNVTIRGANVVNTGGSIVSNDGAIDIAALGSLTTQAVF TGRAQLERSCFVFCHSRASSTVQALGGVIEAGTDITLKAGKQITNIGGMVYAIHNLRLDAPVTLAQAVLGYSTINRTSDL KAWFGNSWAAIYATDTGGIFDSELGQVALTGEGRIDGGAFNAPGGVTAAGGIVTLRAPRRDPVTIGAGNHLGLVSWFGL >Mature_719_residues MKTREWAGHAGGGLRVLGKMVIVASMLAPLAAAAAGIVPDGGTQTSVSAGAGGRQIVNIAPAVAGVSQNTYSSFNVSTAG ASLNNVGINARTIVNQVTGTDRSLIEGNIDVLGSTRANVILANPNGITVNGGSFTNTGHVVLSTGNVSFDDIAIAPGVIR RDVVLDTHTGTIVVGPNGLTSALISLDLIAKNLLIEGPVNNTFSSSTAGLRLLAGTSRVQLDTSISPTDNANDWLTRFTP SSTDTATSFAIDITAAGSLTSGRVQLIVNDRGPGVRSAGPLNASLGDFTLSSNGSVQFSETSLAAAGNAEFDVRDAFSMA DTQLKARAGHVALTASGPLTLLGSGILANDDIKLAANGMLFGPSVAAAGSTIASASGGVVLKSGGDIASTGTLVQGQKAI AGDTDSRGAVTLTAAGSIVNQSLPSTQLGILFGVAGDVWLSAGGGVTNRNARILSNQNVSIAAGGDVLNVVDHTPGADDG AQIPYSSRGSSFLFLTHRTSGFTVDYGEIVDPAKLAYITAEAGNVTIRGANVVNTGGSIVSNDGAIDIAALGSLTTQAVF TGRAQLERSCFVFCHSRASSTVQALGGVIEAGTDITLKAGKQITNIGGMVYAIHNLRLDAPVTLAQAVLGYSTINRTSDL KAWFGNSWAAIYATDTGGIFDSELGQVALTGEGRIDGGAFNAPGGVTAAGGIVTLRAPRRDPVTIGAGNHLGLVSWFGL
Specific function: Evidence for a role in host-cell binding and infection [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell surface [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010069 - InterPro: IPR008619 - InterPro: IPR008638 - InterPro: IPR012334 - InterPro: IPR011050 - InterPro: IPR011102 [H]
Pfam domain/function: PF05594 Fil_haemagg; PF05860 Haemagg_act [H]
EC number: NA
Molecular weight: Translated: 72341; Mature: 72341
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTREWAGHAGGGLRVLGKMVIVASMLAPLAAAAAGIVPDGGTQTSVSAGAGGRQIVNIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEC PAVAGVSQNTYSSFNVSTAGASLNNVGINARTIVNQVTGTDRSLIEGNIDVLGSTRANVI HHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEEECCCCCEE LANPNGITVNGGSFTNTGHVVLSTGNVSFDDIAIAPGVIRRDVVLDTHTGTIVVGPNGLT EECCCEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEEECCCEEEECCCCHH SALISLDLIAKNLLIEGPVNNTFSSSTAGLRLLAGTSRVQLDTSISPTDNANDWLTRFTP HHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHEEECC SSTDTATSFAIDITAAGSLTSGRVQLIVNDRGPGVRSAGPLNASLGDFTLSSNGSVQFSE CCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEC TSLAAAGNAEFDVRDAFSMADTQLKARAGHVALTASGPLTLLGSGILANDDIKLAANGML CEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCEEECCCEEEEECCEE FGPSVAAAGSTIASASGGVVLKSGGDIASTGTLVQGQKAIAGDTDSRGAVTLTAAGSIVN ECCCHHHCCCEEECCCCCEEEECCCCCCCCCCEEECCEEECCCCCCCCEEEEEECCHHHH QSLPSTQLGILFGVAGDVWLSAGGGVTNRNARILSNQNVSIAAGGDVLNVVDHTPGADDG CCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCC AQIPYSSRGSSFLFLTHRTSGFTVDYGEIVDPAKLAYITAEAGNVTIRGANVVNTGGSIV CCCCCCCCCCEEEEEEECCCCCEEEHHHCCCCCEEEEEEECCCCEEEEECEEEECCCCEE SNDGAIDIAALGSLTTQAVFTGRAQLERSCFVFCHSRASSTVQALGGVIEAGTDITLKAG ECCCCEEEEECCCHHHHHEEECHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECC KQITNIGGMVYAIHNLRLDAPVTLAQAVLGYSTINRTSDLKAWFGNSWAAIYATDTGGIF CEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEECCCCCC DSELGQVALTGEGRIDGGAFNAPGGVTAAGGIVTLRAPRRDPVTIGAGNHLGLVSWFGL CCCCCEEEEECCCEECCCCCCCCCCCEECCCEEEEECCCCCCEEEECCCCEEEEEEECC >Mature Secondary Structure MKTREWAGHAGGGLRVLGKMVIVASMLAPLAAAAAGIVPDGGTQTSVSAGAGGRQIVNIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEC PAVAGVSQNTYSSFNVSTAGASLNNVGINARTIVNQVTGTDRSLIEGNIDVLGSTRANVI HHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEEECCCCCEE LANPNGITVNGGSFTNTGHVVLSTGNVSFDDIAIAPGVIRRDVVLDTHTGTIVVGPNGLT EECCCEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEEECCCEEEECCCCHH SALISLDLIAKNLLIEGPVNNTFSSSTAGLRLLAGTSRVQLDTSISPTDNANDWLTRFTP HHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHEEECC SSTDTATSFAIDITAAGSLTSGRVQLIVNDRGPGVRSAGPLNASLGDFTLSSNGSVQFSE CCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEC TSLAAAGNAEFDVRDAFSMADTQLKARAGHVALTASGPLTLLGSGILANDDIKLAANGML CEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCEEECCCEEEEECCEE FGPSVAAAGSTIASASGGVVLKSGGDIASTGTLVQGQKAIAGDTDSRGAVTLTAAGSIVN ECCCHHHCCCEEECCCCCEEEECCCCCCCCCCEEECCEEECCCCCCCCEEEEEECCHHHH QSLPSTQLGILFGVAGDVWLSAGGGVTNRNARILSNQNVSIAAGGDVLNVVDHTPGADDG CCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCC AQIPYSSRGSSFLFLTHRTSGFTVDYGEIVDPAKLAYITAEAGNVTIRGANVVNTGGSIV CCCCCCCCCCEEEEEEECCCCCEEEHHHCCCCCEEEEEEECCCCEEEEECEEEECCCCEE SNDGAIDIAALGSLTTQAVFTGRAQLERSCFVFCHSRASSTVQALGGVIEAGTDITLKAG ECCCCEEEEECCCHHHHHEEECHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECC KQITNIGGMVYAIHNLRLDAPVTLAQAVLGYSTINRTSDLKAWFGNSWAAIYATDTGGIF CEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEECCCCCC DSELGQVALTGEGRIDGGAFNAPGGVTAAGGIVTLRAPRRDPVTIGAGNHLGLVSWFGL CCCCCEEEEECCCEECCCCCCCCCCCEECCCEEEEECCCCCCEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388559; 12910271; 2539596; 1696934; 1791761 [H]