| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is mmgD [H]
Identifier: 238024218
GI number: 238024218
Start: 960751
End: 961926
Strand: Direct
Name: mmgD [H]
Synonym: bglu_2g07980
Alternate gene names: 238024218
Gene position: 960751-961926 (Clockwise)
Preceding gene: 238024217
Following gene: 238024219
Centisome position: 33.98
GC content: 72.28
Gene sequence:
>1176_bases ATGCCGACCGACCACGATCTGCCGTCCCCGGACGCCGTCCGAGCGCGCGCCGTCCGCGACCAAGGCGAGATCGATGCGGT TTCGATTTCGCCGGACCGGCTTGCCGTGCGCGGGATCGATCTGCTGCAACTGATCGATTCCGTCGACTTCGCTGCCGCGA TCCTGCACGTGCTCACGGGCCGGATGCCGGACGCCGACGACGCGCGCGCCCTGGATGGCGCGCTGGCGTCGACGCTCGCC GACGACGGGCCGGCCGAGGACGGCCTGCTCGCCGCGCAACTGGCCCGCCGCCAGCCTCGGCCCGAGGCCTTCCTGGTCGC CGCGATCTCGGCCGGACTGGCTGGGCCGTCGCCACGGCCTCGCGCGTGGCCCGTCACGCTGTCCTACGGCGGGCAGGGCG ACGAGCTTGCCACCGGCCTCGCCATCATTGCCGCGTTACCTCGGCTGCTGGCGGTGTGGTGCGACGCGAACGGCCAGGTG CCGGTCGCGCGGCGAGCGCGGTCGGCGCACGCCGCGCGCGGCTTCAGCGCGGCGATGCTGGGCTGCCTGGGCGGCGACGC AGCGCACGACGCACCGGCGCGCCTGTTCGACGTCCTGCTGGTGGCGCTGCATGGCGGCTTTGGCCTCGTCGCGCCGACCA TCGCGCTGCCGCGCTTCTCGGCGAGCACCTATGCAACCGTCGACCTTAACCTGGTCGCCGGCCTGACCGGCAGCGGGCCA GCGCACGTCGGCGCCTGCAGCGACGCGACTCGCTTTTTTGCAAGCCTGGTCGGCAAATCGGCTGCCGAGATTCGCGATCG CGTCGCGCAGCGCCTGCAGGCGGGCGACCGGATTCCCGGTTTCGGCCATCCGTTGCTCGAGCGCGATCCGCGGCCGGCGG CGCTCGAGCGCCACGCCGTGAGGCTCGGTGTTGGCGGCGCAGCGTTCGACGCTTATCGGGCGGTATGCAATGCGATGCAC GACATGCGGGGGCTGCCCCCGAACATCGATTCGGTTGCCGCGGCGATCCTGCTGGAGCTTGGCGTGCCCGACGCGTTGGC CACGCCGGTGTTTTTGCTCGCGCGGATGCCGACCATGCTCGCGCATGCGTTGCAGAAGAAGGCCCACCCGCCGTTCGGCC AGGCCCGCCCCGTGGCGCGCGAACGCCTTGCTGCACTGCCGAAGGCGTGGATCTGA
Upstream 100 bases:
>100_bases TCGGCGAGCATGCCGGCGTGTCGAAGGGGAGCGGGATGCTCGCGATCGGCTTCGAGGTGCTGATCGCGAAACCGATGCAG CAGTGAGCGGGGCCGCGCCG
Downstream 100 bases:
>100_bases CGCCGCGCCGCCGGCGCACCCCTCAACCCGACATGGAACCGACACCGACATGCTGACCAACCTGCCGCTGGCGCCGCATT GTGCCGCCTCCGATACCCAG
Product: Citrate synthase
Products: NA
Alternate protein names: Citrate synthase 3; Citrate synthase III; Methylcitrate synthase [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTGRMPDADDARALDGALASTLA DDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRPRAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQV PVARRARSAHAARGFSAAMLGCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAVRLGVGGAAFDAYRAVCNAMH DMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTMLAHALQKKAHPPFGQARPVARERLAALPKAWI
Sequences:
>Translated_391_residues MPTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTGRMPDADDARALDGALASTLA DDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRPRAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQV PVARRARSAHAARGFSAAMLGCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAVRLGVGGAAFDAYRAVCNAMH DMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTMLAHALQKKAHPPFGQARPVARERLAALPKAWI >Mature_390_residues PTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTGRMPDADDARALDGALASTLAD DGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRPRAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQVP VARRARSAHAARGFSAAMLGCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGPA HVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAVRLGVGGAAFDAYRAVCNAMHD MRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTMLAHALQKKAHPPFGQARPVARERLAALPKAWI
Specific function: Catalyzes the synthesis of citrate from acetyl-CoA and oxaloacetate. The genomic context suggests that this protein probably functions as a 2-methylcitrate synthase, i.e. catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate [H]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.5; =2.3.3.1 [H]
Molecular weight: Translated: 40671; Mature: 40540
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTG CCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RMPDADDARALDGALASTLADDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRP CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC RAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQVPVARRARSAHAARGFSAAML CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH GCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCC AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAV CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHH RLGVGGAAFDAYRAVCNAMHDMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTML HCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AHALQKKAHPPFGQARPVARERLAALPKAWI HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure PTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTG CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RMPDADDARALDGALASTLADDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRP CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC RAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQVPVARRARSAHAARGFSAAML CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH GCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCC AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAV CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHH RLGVGGAAFDAYRAVCNAMHDMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTML HCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AHALQKKAHPPFGQARPVARERLAALPKAWI HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759838; 8969508; 9384377 [H]