| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024216
Identifier: 238024216
GI number: 238024216
Start: 958593
End: 960020
Strand: Direct
Name: 238024216
Synonym: bglu_2g07960
Alternate gene names: NA
Gene position: 958593-960020 (Clockwise)
Preceding gene: 238024215
Following gene: 238024217
Centisome position: 33.9
GC content: 66.32
Gene sequence:
>1428_bases ATGTCTGACGATCGCGCCACGGCCGCGCCGGGCGCGCCGGCTTCGACACCTGCGTCGCGGGCCGACCGGATGCGACAGTT CGCGGCCGAGGTGCGCGCGACATGGGTGATGCTCTATCCGATGGTGCTGTCGTCGATTTTCGGCTACTGCATGACGCTGT TCGATTATCGCTGGATTCGCGATCTGCCGGCGGAGGACATGGCGCTGCTGGCGCTCGTCAACGGCAGCGTGGCGATCTTC CTGTTCCTGCTCGGCAAGAGCTTCGAGGAGTCGTTCGTGGCGATATTCGCCAAGGCGCCGCGCGAGGAGCAGGGCCGGCT GTTCGTGCAGAGCCTGATATTCGCGGGCGGGACCGGCGTGCTGGTGGTGCTGGTGCTGATCGGTACGCGGGCACCCTTGA TGACGTTCATTTCCGGCGGCCAGTTCCATGGCGAGCGCATGTTCGGCTACTACGCGCTGGTGATAGGCAGCTTTCCGCTC ACGCTGCTCAGCACGGCGCTTTCCGCCGCGATGCGCACCTACGGCGACACCAAGTCACCCGCGCGCATCAGCATTACATG CGGCGTGGTCAACAACGTCCTCGATCCGCTGCTCGTGTTCGGGCTGTTCGGCCAGCATCCGTCGCTGCAGTTGTTCGGCC TCGCGCTGACCTCGTGGATCACCAAGAGCCTGTATCTGGGCTGGTGCGTCCGGTGCATCCGTCCGCGGCTGCGCCGCGAG CAGGTCGTGCTGCCGCGTCCCGGCGTGGAGTGGCCGACACAAGGACGGCTGCTGCGCATCTTCCTGCCTTCGGCTGCGCT CGAGGCGCTGACCTTTCTTGCGAATACGGCGGTCTACTCGCTGATCGCCCGCTACGGCGTGCGCGCCATCGGCGGGTACG GAATCGGCTTCGAGCTGATGACGATCGGATTCATCCTCATCAAAGGTTTGAGCATGGTGTTCATGATCCGGATCGGTCAC CTCGTGCGCAGCCGGGCACCGTCCCGTGCCGCACTGCAGTCGGTGATGCTGCTCGGCGTGCTGTTCACCGCGGCGATCAG TGCCGTGTTCTTCCTGCTGCGTTCGCTCGCGCTGCACTTTCTCGCGTCCGACGCCGGCGTGATCGCGGTCGCGACTGCGC TGCTCGACTACGTCCCGCTCTTCGTCTTCAGCTATCTGCTGACGAACCTCGTGACAGGCTGCTTCCAGGTTCTCGAGCGC CCGGCGCCCGCGATGGCGCTCGGGCTGTTCTTTTCCTGGGTCGTCACGCCGGGCGCGATCTACCTGGGCGTCATGCACCA TCTCGCGCTCACGCAATTGTTCGCGCTGCTCGCGGGCGTGAGCGTGGTGCGCCAGGCCGTGTACCTGAGACTGTTCCTGC GGCTCATGCGCAGGCTTGGCAACGCGCCGGCCGCGCGCCCGGCCGGCGCGCCCGCCGCCGCCGGATGA
Upstream 100 bases:
>100_bases GTCGACAAGGGTGAGGGGCGTCTCATGGTGCTCGGCCGCGATGCATTGCGCTTTTCGGCGCGCCAGAAGCTGCCGCGCCT GATCGACGAGAGGCACGCCC
Downstream 100 bases:
>100_bases TTCCACGACCGTTGTACCCCTAGCCCTCACGACTGGAGACCTGCATGCGTACCAATACCCCCGCCGAAGTCAGCGCCGAC ACCTATGACTACTACGTCGA
Product: putative Na+-driven multidrug efflux pump
Products: NA
Alternate protein names: Na+-Driven Multidrug Efflux Pump; Sodium-Driven Multidrug Efflux Pump Protein
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MSDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIRDLPAEDMALLALVNGSVAIF LFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGVLVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPL TLLSTALSAAMRTYGDTKSPARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELMTIGFILIKGLSMVFMIRIGH LVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHFLASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLER PAPAMALGLFFSWVVTPGAIYLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG
Sequences:
>Translated_475_residues MSDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIRDLPAEDMALLALVNGSVAIF LFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGVLVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPL TLLSTALSAAMRTYGDTKSPARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELMTIGFILIKGLSMVFMIRIGH LVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHFLASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLER PAPAMALGLFFSWVVTPGAIYLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG >Mature_474_residues SDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIRDLPAEDMALLALVNGSVAIFL FLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGVLVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPLT LLSTALSAAMRTYGDTKSPARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRREQ VVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELMTIGFILIKGLSMVFMIRIGHL VRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHFLASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLERP APAMALGLFFSWVVTPGAIYLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG
Specific function: Unknown
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51603; Mature: 51472
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLPAEDMALLALVNGSVAIFLFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGV CCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH LVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPLTLLSTALSAAMRTYGDTKSP HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC ARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE CEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELM CEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TIGFILIKGLSMVFMIRIGHLVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLERPAPAMALGLFFSWVVTPGAI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLPAEDMALLALVNGSVAIFLFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGV CCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH LVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPLTLLSTALSAAMRTYGDTKSP HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC ARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE CEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELM CEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TIGFILIKGLSMVFMIRIGHLVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLERPAPAMALGLFFSWVVTPGAI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA