| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is lifO [H]
Identifier: 238024195
GI number: 238024195
Start: 937627
End: 938685
Strand: Direct
Name: lifO [H]
Synonym: bglu_2g07740
Alternate gene names: 238024195
Gene position: 937627-938685 (Clockwise)
Preceding gene: 238024194
Following gene: 238024196
Centisome position: 33.16
GC content: 76.68
Gene sequence:
>1059_bases ATGGCGACGGGCGATCGTGCGGCGCGCGGCGGGCGATCCGCGTGGCCGAGGCGCGGTGCGTCGTTCGCGCTGGCCGCGGC CGTCGCGGTCGCCTCGTGTGCCGCGATCGCGCTGTGGCTGCGGCCTGCCGGCCCCGCCCCCGCGCCGGCCGCGGCGGGCG CGGCCGCCCCGGCCGGCCGGCCCGGCACGGCGAGCGGCGCGGCCGATGCCGCCGCGCCGTTGCCGGTGGCGCTGCCTGCC ACGCTGGCCGGCTCGAATGCGCCGCGCCTGCCGCTCGGCGCCGACGGCCGGCTCGCGAGAACCCGTGCGGTGCGCGACTT CTTCGACTATTGCCTGACCGCGCAAGGCGACCTGACGCCCGCCGCGCTCGACGTGCTGGTGCGGCGCGAGATTGCCGCGC AGCTCGACGGCAGCCCCGCCCAGGCCGAGGCGCTCGACGTGTGGCGGCGCTATCGCGCCTATTTCGACGCGCTCGGCAAA TTGCCCGGTGACAACGCGGTGCTCGGCGACAAGCTCGATCCGACCGCCATGCAGTTCGCGCTCGACCAGCGCGCGGCGCT GGCCGATCGCACGCTCGGCGAGTGGGCCGGGCCCTTCTTCGGCGACGAGCAGCGCCGGCAGCGCCACGACCTCGAACGGC TCCGGATCGCCAACGACGCCTCGCTGAGCCCCGAGCAGAAGGCTGCGCGGCTGGCCGCGCTCGATGCGCAGCTGACGCCG GGGGAGCGCGCCCAGCAGGCGGCGCTGCAGGCGCAGCAGGACGCGGTGAAGAAGATCGCCGACTTGCAGAAGGCCGGCGC GACGCCGGACCAGATGCGTGCGCAGATCGCGCAGACGCTCGGGCCGGAAGCGGCCGCGCGCGCCGCGCAACTGCAGCAGG ACGACGATGCCTGGCAGAGCCGCTATCGCGCCTACGCGGCCGAGCGCGACCGGATCGCCGCGCAGGGGCTCGCGCCGCAG GATCGCGACGCGCGGATTGCGCAGCTCAGGCAGCAGACCTTCAAGGCGCCGGGCGAGGCGATCCGCGCGGCGTCGCTCGA TCGCGGCGCGGGCGGCTAG
Upstream 100 bases:
>100_bases ACGAGATCAACCAGCTGCTCGGCGTGCGCGGCGCCAACGCGGAAGACCCGCTTGCGGTGATCCGCACCCATGTGAACCGG CTCAAGCTGCAGGGCGTGTG
Downstream 100 bases:
>100_bases GGGCCACGCCGCGCCGGAGGCCCGTTCGCGGCGCTCGAACGGGGTGGGGCGGCGGCGGTGCCGCTGCAGCGCCGGTGGTG TGCCGAGATGGCGCCTGTGA
Product: lipase chaperone
Products: NA
Alternate protein names: Lipase activator protein; Lipase foldase; Lipase helper protein; Lipase modulator [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGRPGTASGAADAAAPLPVALPA TLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTPAALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGK LPGDNAVLGDKLDPTAMQFALDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQSRYRAYAAERDRIAAQGLAPQ DRDARIAQLRQQTFKAPGEAIRAASLDRGAGG
Sequences:
>Translated_352_residues MATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGRPGTASGAADAAAPLPVALPA TLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTPAALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGK LPGDNAVLGDKLDPTAMQFALDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQSRYRAYAAERDRIAAQGLAPQ DRDARIAQLRQQTFKAPGEAIRAASLDRGAGG >Mature_351_residues ATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGRPGTASGAADAAAPLPVALPAT LAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTPAALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGKL PGDNAVLGDKLDPTAMQFALDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTPG ERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQSRYRAYAAERDRIAAQGLAPQD RDARIAQLRQQTFKAPGEAIRAASLDRGAGG
Specific function: May be involved in the folding of the extracellular lipase during its passage through the periplasm [H]
COG id: COG5380
COG function: function code O; Lipase chaperone
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase chaperone family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004961 [H]
Pfam domain/function: PF03280 Lipase_chap [H]
EC number: NA
Molecular weight: Translated: 36857; Mature: 36725
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGR CCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PGTASGAADAAAPLPVALPATLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTP CCCCCCCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH AALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGKLPGDNAVLGDKLDPTAMQFA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH LDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQS CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHH RYRAYAAERDRIAAQGLAPQDRDARIAQLRQQTFKAPGEAIRAASLDRGAGG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure ATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGR CCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PGTASGAADAAAPLPVALPATLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTP CCCCCCCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH AALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGKLPGDNAVLGDKLDPTAMQFA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH LDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQS CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHH RYRAYAAERDRIAAQGLAPQDRDARIAQLRQQTFKAPGEAIRAASLDRGAGG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8412704; 8412705 [H]