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The map label for this gene is farR [C]

Identifier: 238024180

GI number: 238024180

Start: 921270

End: 921584

Strand: Direct

Name: farR [C]

Synonym: bglu_2g07590

Alternate gene names: 238024180

Gene position: 921270-921584 (Clockwise)

Preceding gene: 238024177

Following gene: 238024181

Centisome position: 32.58

GC content: 72.06

Gene sequence:

>315_bases
ATGCAAGCACACATCGAAACCGTGGTCGGCCGCGCGAGCGAATCGCGCGCGCCGCGTCTCGCGCAGGACTGGCGCCCTGA
CTTCGCCCGCATTCGCGGCCACGTCGCGCGCGCGATCGCGGACCAGATCGAGGAGGCGATCCGCGCCGGCGTGTTCCGGC
CCGGCGACCGGCTGCCGAGCCAGCAGGCCATCGCCGATTCGCTCGGCTTCCATCCGAATACCATCCATGCCGCGTTTCGC
GAGGCGGCGCGGCGCGGCCTGATCAAGGGCTTCGCCGGGCGCGGCACGCTCGTGCTTGCCGCTGCGCCGAGTTGA

Upstream 100 bases:

>100_bases
GAATCGCGGCATCGTCCGCGCGGCGCGGCCGTCGCCGCCGACGATCGACAACCATCAAGCCTGCCGGCGTGAAAGGGCAC
TCACACTAGGTGGATAGCGC

Downstream 100 bases:

>100_bases
AGCGGATCGCATGACGCAACGCAGCAAAGGGCGGTCGCCACCGCCGCGAGCCAGCGTTCGGGCCGGGCGCGCAGCATCGC
CTTCGTCGCCGGCCATTCGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MQAHIETVVGRASESRAPRLAQDWRPDFARIRGHVARAIADQIEEAIRAGVFRPGDRLPSQQAIADSLGFHPNTIHAAFR
EAARRGLIKGFAGRGTLVLAAAPS

Sequences:

>Translated_104_residues
MQAHIETVVGRASESRAPRLAQDWRPDFARIRGHVARAIADQIEEAIRAGVFRPGDRLPSQQAIADSLGFHPNTIHAAFR
EAARRGLIKGFAGRGTLVLAAAPS
>Mature_104_residues
MQAHIETVVGRASESRAPRLAQDWRPDFARIRGHVARAIADQIEEAIRAGVFRPGDRLPSQQAIADSLGFHPNTIHAAFR
EAARRGLIKGFAGRGTLVLAAAPS

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 11247; Mature: 11247

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAHIETVVGRASESRAPRLAQDWRPDFARIRGHVARAIADQIEEAIRAGVFRPGDRLPS
CCCHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QQAIADSLGFHPNTIHAAFREAARRGLIKGFAGRGTLVLAAAPS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MQAHIETVVGRASESRAPRLAQDWRPDFARIRGHVARAIADQIEEAIRAGVFRPGDRLPS
CCCHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QQAIADSLGFHPNTIHAAFREAARRGLIKGFAGRGTLVLAAAPS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400197 [H]