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The map label for this gene is yjcF [C]

Identifier: 238024163

GI number: 238024163

Start: 887911

End: 888981

Strand: Reverse

Name: yjcF [C]

Synonym: bglu_2g07410

Alternate gene names: 238024163

Gene position: 888981-887911 (Counterclockwise)

Preceding gene: 238024164

Following gene: 238024162

Centisome position: 31.44

GC content: 70.68

Gene sequence:

>1071_bases
ATGAGCACGATCTGGGACGACATCGCGCTGGCGATCCAGCTCGACCAGCCGATCAGGCAGCGCGAGCTGGCCGGGCTCGA
CGCGCGCCGCCGCGAGCTGGGCGGCGCGGCGTTCAGCGAGGTGGACTTCTCGCACGCCTCGTTCGCCGACGCCTCGCTGG
CGCGCGCGCGCTTCATCGAGTGCGACCTCAGCGACGCCGACTTCGGCAACGCCGATCTCGACCACGCGAGCTTCGTCAAG
TGCAAGCTGCCGCGCGCGCGGCTCGCCGGCCGCAACATGAAGCACGCCTGCTGGGTGGATTGCGACCTCAGCGACAGCGA
CTGGAGCCACGTGCAGATGCAGACCAGCTCGATCGTCAACAGCGCGCTCGAGGGCGCGCGCTTCGCGGCCGGCACGCTCA
CGCGCTGCACGCTGATCCAGGACGGCTTCGAGGGCGCCAGCGTGGCCGGCGCGACGCTCGAGCGCTGCGTGGTGAGCCCG
GCCGACTGGCGCGAGGTGGACCTGCGCGGGCTGAGCGCCACCGGGGTGGTGTTCTCGAAGGCGAACTTCAGCGGCCAGCT
CATGAGCGGCCTGCGCCTGCGGCGCTGCTCGCTGCAGGCAGCGGAGCTCGCCCAGGTCGATCTGGCGGGCGCCGACCTGA
CCCAGTCGAACCTGTACCAGGCGCGCCTCACGCAGGCCAACCTCAGCAACGTCGAGGCCGGCCACGCGCTGTTCTATCAG
GCGAGCCTCGACCACGTGAACCTGGCGGAGGCCAGGCTCGACGGCGCGATCTTCCAGCAGGCGAGCCTGGCCGACTGCCG
GCTCGACGGCGCGCACCTGAAGGCCAGCATCTGGAACAAGAGCCACCACCAGCGCGTGTCGTTCCGCGGCGCCGAACTCG
TCCACGCGCGCCTCGAACACGTCACGGGCGATCACGTCGACTTCGCCGACGCGACGCTCGATCACGCCCAAATGCATAAC
GCGACGCTGTGCGACGCGCGGTTTCGCGGAGCCAGCCTGCGCCAGGTCGGCCGGACCGATCCGGCGCGCCTCTCGGCCGA
AGCCCGTACCCTTGCCCTGGAGAACGAATGA

Upstream 100 bases:

>100_bases
AGACCGATTTCACCGGCGCGCGGCTGGTGGACGCCGTGTTCGCGCAGTGCGAGCAGACCGGCGCGATCCCGCCGCAAGGC
GTCACCACCGGGAGCCCCGC

Downstream 100 bases:

>100_bases
TGGGTTCCACCCGGACCACCAGCAAACTTCCGCCCCAGCTACCGCTGCATCTGGTCGAGGCCAGGGTCATCGTGGCGCTG
GAACAGCACGCCTATCTGCT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSTIWDDIALAIQLDQPIRQRELAGLDARRRELGGAAFSEVDFSHASFADASLARARFIECDLSDADFGNADLDHASFVK
CKLPRARLAGRNMKHACWVDCDLSDSDWSHVQMQTSSIVNSALEGARFAAGTLTRCTLIQDGFEGASVAGATLERCVVSP
ADWREVDLRGLSATGVVFSKANFSGQLMSGLRLRRCSLQAAELAQVDLAGADLTQSNLYQARLTQANLSNVEAGHALFYQ
ASLDHVNLAEARLDGAIFQQASLADCRLDGAHLKASIWNKSHHQRVSFRGAELVHARLEHVTGDHVDFADATLDHAQMHN
ATLCDARFRGASLRQVGRTDPARLSAEARTLALENE

Sequences:

>Translated_356_residues
MSTIWDDIALAIQLDQPIRQRELAGLDARRRELGGAAFSEVDFSHASFADASLARARFIECDLSDADFGNADLDHASFVK
CKLPRARLAGRNMKHACWVDCDLSDSDWSHVQMQTSSIVNSALEGARFAAGTLTRCTLIQDGFEGASVAGATLERCVVSP
ADWREVDLRGLSATGVVFSKANFSGQLMSGLRLRRCSLQAAELAQVDLAGADLTQSNLYQARLTQANLSNVEAGHALFYQ
ASLDHVNLAEARLDGAIFQQASLADCRLDGAHLKASIWNKSHHQRVSFRGAELVHARLEHVTGDHVDFADATLDHAQMHN
ATLCDARFRGASLRQVGRTDPARLSAEARTLALENE
>Mature_355_residues
STIWDDIALAIQLDQPIRQRELAGLDARRRELGGAAFSEVDFSHASFADASLARARFIECDLSDADFGNADLDHASFVKC
KLPRARLAGRNMKHACWVDCDLSDSDWSHVQMQTSSIVNSALEGARFAAGTLTRCTLIQDGFEGASVAGATLERCVVSPA
DWREVDLRGLSATGVVFSKANFSGQLMSGLRLRRCSLQAAELAQVDLAGADLTQSNLYQARLTQANLSNVEAGHALFYQA
SLDHVNLAEARLDGAIFQQASLADCRLDGAHLKASIWNKSHHQRVSFRGAELVHARLEHVTGDHVDFADATLDHAQMHNA
TLCDARFRGASLRQVGRTDPARLSAEARTLALENE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 38742; Mature: 38610

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIWDDIALAIQLDQPIRQRELAGLDARRRELGGAAFSEVDFSHASFADASLARARFIE
CCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCHHHHHHHHHEEEE
CDLSDADFGNADLDHASFVKCKLPRARLAGRNMKHACWVDCDLSDSDWSHVQMQTSSIVN
ECCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHH
SALEGARFAAGTLTRCTLIQDGFEGASVAGATLERCVVSPADWREVDLRGLSATGVVFSK
HHHHCCHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEECCEEEEE
ANFSGQLMSGLRLRRCSLQAAELAQVDLAGADLTQSNLYQARLTQANLSNVEAGHALFYQ
CCCCHHHHHHHHHHHHHCCHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEE
ASLDHVNLAEARLDGAIFQQASLADCRLDGAHLKASIWNKSHHQRVSFRGAELVHARLEH
ECCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCHHEECCCHHHHHHHHHHH
VTGDHVDFADATLDHAQMHNATLCDARFRGASLRQVGRTDPARLSAEARTLALENE
CCCCCCCHHHHHHHHHHHCCCEEEHHHCCCCHHHHHCCCCHHHHCCCCEEEEECCC
>Mature Secondary Structure 
STIWDDIALAIQLDQPIRQRELAGLDARRRELGGAAFSEVDFSHASFADASLARARFIE
CCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCHHHHHHHHHEEEE
CDLSDADFGNADLDHASFVKCKLPRARLAGRNMKHACWVDCDLSDSDWSHVQMQTSSIVN
ECCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHH
SALEGARFAAGTLTRCTLIQDGFEGASVAGATLERCVVSPADWREVDLRGLSATGVVFSK
HHHHCCHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEECCEEEEE
ANFSGQLMSGLRLRRCSLQAAELAQVDLAGADLTQSNLYQARLTQANLSNVEAGHALFYQ
CCCCHHHHHHHHHHHHHCCHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEE
ASLDHVNLAEARLDGAIFQQASLADCRLDGAHLKASIWNKSHHQRVSFRGAELVHARLEH
ECCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCHHEECCCHHHHHHHHHHH
VTGDHVDFADATLDHAQMHNATLCDARFRGASLRQVGRTDPARLSAEARTLALENE
CCCCCCCHHHHHHHHHHHCCCEEEHHHCCCCHHHHHCCCCHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA