| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024156
Identifier: 238024156
GI number: 238024156
Start: 878998
End: 880143
Strand: Reverse
Name: 238024156
Synonym: bglu_2g07340
Alternate gene names: NA
Gene position: 880143-878998 (Counterclockwise)
Preceding gene: 238024157
Following gene: 238024150
Centisome position: 31.13
GC content: 70.07
Gene sequence:
>1146_bases ATGAATCCATCGCTTCTTGCCGACGCCCGGCAGCATTTCGAACAGACCCTGCGGATTTCCTTCGACGCGCTGCTCGCGCC GGTCGAGATGTACCCGCCGTGCGGACGGCCGGCGCGCGAGTGCCGCAGCTACAGCCAGATCAACCAGGAGCGGCGCCATG ACGACCCGAGCCTGCCGCTCGGGGCCTGGCAGCGCGACCTGAAGCGCACCGACTGGCTCAAGGTCAGCCATCTGGTCGCG GACATGCTGCTCCACGACAGCAAGGACATGCAGCTGCTGGCCTGGCTCTACGAGGCGCAGATCAAGCAATACGGCTTCGC CGGCATCGCGCCGACGCTGGTGCTGCTGCGCGAGATGGTCTCGCGCTACTGGAACGAGATCCACCCGTTCGGGAGCGAGG GCGATTTCGAGCATCGCGCCAACCTGATCCGCTCGATCTCCGACAAGCATCTCGCGGCGCTGCGGCTCACGCCGCTGCTG CGCCTGGAGGGCGGCAAGACCTATTGCTGGGCCGACTGGGAGCGCGCGCATCGCCATGAGCGCATGCGCGCCGGCGGCCA TGCCGAGCTGCCCGCCGAGGGCGCCACGCTGGAGGAGCTGCAGGGGGCGCTGAACGCCACCGCGAGCGCCGATTTCCTGA CGCTGCGCGCGCGGCTCTGCGACGCGCTGCAGGCGATCGCCGAGATGAGCGCGGCGCTCGATCCGCGCTTCGGCAACGAG GCGCCGAGCATGGGCAAGACCATCGAGCTGCTGGAGACGATCCGCTCGCTGGTCGACGGCGAACTGCACACGCGCGGCGT GCGCACCGAGCCTGAAGCGCCGCTGCAGGCCGATGCCACGGCCGATGACGCCGCGCCCGCTGCAACCGAGCCGCACGACA CGCCGGGCGCGGCCGCCGCCGCGCCTGGGGGCGGCCCGATCGCGAGCCGCGCCGACGCCTACGCGCGCCTCGAGGAAATC GCCGAGTACCTGATGCGCCAGGAGCCGCACAGCCCGGTGCCGTACCTGGTGCGGCGCGCCACGCTGTGGGGCCGCATGAA CACGGCCGAGCTGTATCAGGAGCTGTTCCTGAGGCTCGGCGGGCAGCTGAACATCTTCGAGATGGTGGGGATCGAGAATC CCGGCAGCCCCGAACGGCAGGCATAA
Upstream 100 bases:
>100_bases TCCTCGGTATCCGGCTGTCGAACGTCAACGCGAAAACCCCGACGCCGCTGAAATTGCCGGCGGTATTCCCGATCTCGGTT CCTCCCTTGACGCCACGACC
Downstream 100 bases:
>100_bases GCGAAGCGGGCACGACGCGAGGGCACCGACATGCAGAACCCCATCCTGACCATCGACACCGGAGATTCGGCGCGAGGCCG CGAGCCGTCTGCCGGCGACG
Product: type VI secretion system protein EvpK
Products: NA
Alternate protein names: ImpA N-Terminal; ImpA Family Type VI Secretion-Associated Protein; ImpA Domain-Containing Protein; ImpA-Like; ImpA-Like N-Terminal Family Protein; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Protein TssA; Type VI Secretion System Protein EvpK; ImpA Domain Protein; ImpA-Related N-Terminal Domain-Containing; ImpA-Related Protein; T6ss A; ImpA-Like Protein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPLGAWQRDLKRTDWLKVSHLVA DMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMVSRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLL RLEGGKTYCWADWERAHRHERMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAAAPGGGPIASRADAYARLEEI AEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLGGQLNIFEMVGIENPGSPERQA
Sequences:
>Translated_381_residues MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPLGAWQRDLKRTDWLKVSHLVA DMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMVSRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLL RLEGGKTYCWADWERAHRHERMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAAAPGGGPIASRADAYARLEEI AEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLGGQLNIFEMVGIENPGSPERQA >Mature_381_residues MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPLGAWQRDLKRTDWLKVSHLVA DMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMVSRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLL RLEGGKTYCWADWERAHRHERMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAAAPGGGPIASRADAYARLEEI AEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLGGQLNIFEMVGIENPGSPERQA
Specific function: Unknown
COG id: COG3515
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42439; Mature: 42439
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH GAWQRDLKRTDWLKVSHLVADMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLLRLEGGKTYCWADWERAHRHE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCHHHHHHHH RMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE HHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAA CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGGGPIASRADAYARLEEIAEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC GQLNIFEMVGIENPGSPERQA CCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH GAWQRDLKRTDWLKVSHLVADMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLLRLEGGKTYCWADWERAHRHE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCHHHHHHHH RMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE HHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAA CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGGGPIASRADAYARLEEIAEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC GQLNIFEMVGIENPGSPERQA CCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA