| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is catB1 [H]
Identifier: 238024138
GI number: 238024138
Start: 841877
End: 843040
Strand: Direct
Name: catB1 [H]
Synonym: bglu_2g07140
Alternate gene names: 238024138
Gene position: 841877-843040 (Clockwise)
Preceding gene: 238024136
Following gene: 238024139
Centisome position: 29.78
GC content: 71.99
Gene sequence:
>1164_bases ATGAACTCCGCCACCGCCGCCTCCGCCCCGTCCCGCGCCACCGTCGAGCGCGTCGAAACCTGCCTCGTCGATCTGCCCAC GATCCGCCCGCACCGGCTGTCGGTGGCCACCATGCACGGGCAAACCCTGATGCTGGTGAAGCTGTTCTGCAGCGACGGCG TGGTCGGCATCGGCGAGGGCACCACCATCGCCGGCATGGCCTACGGGCCGGAGAGCCCGGAGGCGATGAAGCTGGCGATC GACGCCTATTTCGCGCCGGCCATGATCGGCCGCGACGCCACGCAGGTGCAGGCGCTGATGGCGCACCTCGGCAAGCTGGT GCGCGTCAATCACTTCGCCAAGAGCGCGCTGGAGACGGCGCTGCTCGACGCGCAAGGCAAGCGGCTGGGCGTGCCCCTGA GCGAACTGCTCGGCGGGCGCCGCCGCGAGCGGCTGCCGGTGGCGTGGACGCTCGCCTCGGGCGACACCGCGCGCGACATC GAGGAGGCCGAGCGGATGATCGAGGCTCGCCGCCATCGCGTCTTCAAGCTGAAGATCGGCGCGAGGCCGGTGGAGGCCGA CGTGCGCCACGTGGCCGAGATCTGCCGGGCGCTGGACGGGCGCGGCACGGTGCGGGTGGACGTCAACATGGCCTGGAGCG AGACGCAGGCGGCCCGCGCGATCCCGGCACTGGCCGAGGCGGGCTGCGAGCTGGTCGAGCAGCCGGTGGCCTCGCCCGCC GCGCTGGCGCGCCTGACGCGCCGCTACCCGGTGGCCTTGATGGCCGACGAGATCCTGCAAGGCCCCGAGAGCGCGTTCGA GATCGCCCGGCAGGGCGGCGCCGACGTGTTCGCGATTAAGATCGAGCAGAGCGGCGGCCTGTTCGCGGCGCAGCGCGTGG CGGCGGTGGCCGACGCGGCCGGCATCGAACTCTACGGCGGCACCATGCTGGAGGGCGCCGTCAGCACGATCGCCTCGGCG CAGCTGTTCGCGAGCTTCGCGAATCTGCAGTGGGGCACCGAGCTGTTCGGGCCGCTGCTCATCACCGAGGAAATCCTCAC CACGCCGCTCGACTATCGCGATTTCGAGCTGACCGTGCCCGCCGGCCCCGGCCTCGGCATCGAGCTCGACGAGGCCAAGC TGCGCCGCTTCACGCGCGACGGGCTGATCCGCGTGACCCGTTGA
Upstream 100 bases:
>100_bases GGAGCGTTGAGGGGATGTGACGGACGATATCTTAAAGGTATCGTGCCGGATAAAAAAGGTGTTGGACGCGCCGCGCCCGC GCCCCGTATAAATCGATGCC
Downstream 100 bases:
>100_bases TTCCCATCGATCGAAAGGAACCCCGAGATGCTTTTCCACGTGCGCATGGACGTCAATCTGCCGGCCGACCTGCCCGCCGA CGTCGCCGACGCGATCAAGC
Product: Muconate and chloromuconate cycloisomerase
Products: NA
Alternate protein names: Cis,cis-muconate lactonizing enzyme I 1; MLE 1; Muconate cycloisomerase I 1 [H]
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MNSATAASAPSRATVERVETCLVDLPTIRPHRLSVATMHGQTLMLVKLFCSDGVVGIGEGTTIAGMAYGPESPEAMKLAI DAYFAPAMIGRDATQVQALMAHLGKLVRVNHFAKSALETALLDAQGKRLGVPLSELLGGRRRERLPVAWTLASGDTARDI EEAERMIEARRHRVFKLKIGARPVEADVRHVAEICRALDGRGTVRVDVNMAWSETQAARAIPALAEAGCELVEQPVASPA ALARLTRRYPVALMADEILQGPESAFEIARQGGADVFAIKIEQSGGLFAAQRVAAVADAAGIELYGGTMLEGAVSTIASA QLFASFANLQWGTELFGPLLITEEILTTPLDYRDFELTVPAGPGLGIELDEAKLRRFTRDGLIRVTR
Sequences:
>Translated_387_residues MNSATAASAPSRATVERVETCLVDLPTIRPHRLSVATMHGQTLMLVKLFCSDGVVGIGEGTTIAGMAYGPESPEAMKLAI DAYFAPAMIGRDATQVQALMAHLGKLVRVNHFAKSALETALLDAQGKRLGVPLSELLGGRRRERLPVAWTLASGDTARDI EEAERMIEARRHRVFKLKIGARPVEADVRHVAEICRALDGRGTVRVDVNMAWSETQAARAIPALAEAGCELVEQPVASPA ALARLTRRYPVALMADEILQGPESAFEIARQGGADVFAIKIEQSGGLFAAQRVAAVADAAGIELYGGTMLEGAVSTIASA QLFASFANLQWGTELFGPLLITEEILTTPLDYRDFELTVPAGPGLGIELDEAKLRRFTRDGLIRVTR >Mature_387_residues MNSATAASAPSRATVERVETCLVDLPTIRPHRLSVATMHGQTLMLVKLFCSDGVVGIGEGTTIAGMAYGPESPEAMKLAI DAYFAPAMIGRDATQVQALMAHLGKLVRVNHFAKSALETALLDAQGKRLGVPLSELLGGRRRERLPVAWTLASGDTARDI EEAERMIEARRHRVFKLKIGARPVEADVRHVAEICRALDGRGTVRVDVNMAWSETQAARAIPALAEAGCELVEQPVASPA ALARLTRRYPVALMADEILQGPESAFEIARQGGADVFAIKIEQSGGLFAAQRVAAVADAAGIELYGGTMLEGAVSTIASA QLFASFANLQWGTELFGPLLITEEILTTPLDYRDFELTVPAGPGLGIELDEAKLRRFTRDGLIRVTR
Specific function: Catalyzes a syn cycloisomerization [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI48994953, Length=358, Percent_Identity=24.5810055865922, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013370 - InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =5.5.1.1 [H]
Molecular weight: Translated: 41476; Mature: 41476
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSATAASAPSRATVERVETCLVDLPTIRPHRLSVATMHGQTLMLVKLFCSDGVVGIGEG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEHHHHHHCCCEEECCCC TTIAGMAYGPESPEAMKLAIDAYFAPAMIGRDATQVQALMAHLGKLVRVNHFAKSALETA CEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDAQGKRLGVPLSELLGGRRRERLPVAWTLASGDTARDIEEAERMIEARRHRVFKLKIG HHHCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEEC ARPVEADVRHVAEICRALDGRGTVRVDVNMAWSETQAARAIPALAEAGCELVEQPVASPA CCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHH ALARLTRRYPVALMADEILQGPESAFEIARQGGADVFAIKIEQSGGLFAAQRVAAVADAA HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCC GIELYGGTMLEGAVSTIASAQLFASFANLQWGTELFGPLLITEEILTTPLDYRDFELTVP CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC AGPGLGIELDEAKLRRFTRDGLIRVTR CCCCCCEEECHHHHHHHHHCCCEEECC >Mature Secondary Structure MNSATAASAPSRATVERVETCLVDLPTIRPHRLSVATMHGQTLMLVKLFCSDGVVGIGEG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEHHHHHHCCCEEECCCC TTIAGMAYGPESPEAMKLAIDAYFAPAMIGRDATQVQALMAHLGKLVRVNHFAKSALETA CEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDAQGKRLGVPLSELLGGRRRERLPVAWTLASGDTARDIEEAERMIEARRHRVFKLKIG HHHCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEEC ARPVEADVRHVAEICRALDGRGTVRVDVNMAWSETQAARAIPALAEAGCELVEQPVASPA CCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHH ALARLTRRYPVALMADEILQGPESAFEIARQGGADVFAIKIEQSGGLFAAQRVAAVADAA HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCC GIELYGGTMLEGAVSTIASAQLFASFANLQWGTELFGPLLITEEILTTPLDYRDFELTVP CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC AGPGLGIELDEAKLRRFTRDGLIRVTR CCCCCCEEECHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9473520; 9260969 [H]