| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024127
Identifier: 238024127
GI number: 238024127
Start: 829877
End: 830059
Strand: Direct
Name: 238024127
Synonym: bglu_2g07020
Alternate gene names: NA
Gene position: 829877-830059 (Clockwise)
Preceding gene: 238024126
Following gene: 238024133
Centisome position: 29.35
GC content: 60.11
Gene sequence:
>183_bases ATGGACAAGAACCGCATTGAAGGCGCCGTCAAGCAGGTGAAGGGGTCGATCAAGGAAGCGATCGGTAAGGTCACCGGCGA CCGCGCGACCCAGGCCGAAGGGATTGCCGAGAAGACGGCCGGCAAGGTCCAGTCGAACGTCGGCAAGGCGAGCGACTCCG TCAAGGAGCAGTTTAAGAAGTAA
Upstream 100 bases:
>100_bases ATGCCGGACCTGACGATACTGATTCCATTCCGTATGCAAGCCAGCGGTTGCGACGGAAGACGTTGTCCCATCTCTATCGT CAACCTGGAGGGAAACCATC
Downstream 100 bases:
>100_bases CGCGTGAAAGCCCAGAACGCCTCGCCGGGTCGATTCCGGCGAGGCGTTTTGCGTTTGGTGGTCAGGCTGCTTGCCGGCGG AGCGCCCCCAGCCCGAGCTC
Product: CsbD-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MDKNRIEGAVKQVKGSIKEAIGKVTGDRATQAEGIAEKTAGKVQSNVGKASDSVKEQFKK
Sequences:
>Translated_60_residues MDKNRIEGAVKQVKGSIKEAIGKVTGDRATQAEGIAEKTAGKVQSNVGKASDSVKEQFKK >Mature_60_residues MDKNRIEGAVKQVKGSIKEAIGKVTGDRATQAEGIAEKTAGKVQSNVGKASDSVKEQFKK
Specific function: Unknown
COG id: COG3237
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0337 (CsbD) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008462 [H]
Pfam domain/function: PF05532 CsbD [H]
EC number: NA
Molecular weight: Translated: 6346; Mature: 6346
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNRIEGAVKQVKGSIKEAIGKVTGDRATQAEGIAEKTAGKVQSNVGKASDSVKEQFKK CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MDKNRIEGAVKQVKGSIKEAIGKVTGDRATQAEGIAEKTAGKVQSNVGKASDSVKEQFKK CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]