| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024099
Identifier: 238024099
GI number: 238024099
Start: 797599
End: 798552
Strand: Direct
Name: 238024099
Synonym: bglu_2g06670
Alternate gene names: NA
Gene position: 797599-798552 (Clockwise)
Preceding gene: 238024098
Following gene: 238024100
Centisome position: 28.21
GC content: 47.48
Gene sequence:
>954_bases TTGAGAGCTAACGCATACATCAAGATCATTTTTACAATCGCTCTTGTTCAACTCGCAGCCTGCAATCGCCATCAGGATTC GAGCATGAGTAACCTATCCCAATCAATGACAGAATCAATGCGTACTGTTTGCGTCGGTCGGTACACAATCGATCTTCCGA GATCTGCAGCCGGCCTCAAAATTGGGCAGAAAATTAATGGTATCCGAATTGAAGCGCAGTATCCGGCCAATACAGAGTTG CTGAAGCGCAAAGTTGCGGAGGACGCGAAGCCTGGCGCCGGAAAATCCGCGTCTACATTGACCGGATCGCCTAATAACTC TCCCGACTCTTCGATCTTCCAGATATCGGAAGATGGTCAAGGCTTGCATACGATACATGGCTATATGACAAAGAGCGATG TGTTGTATTCATTCACCGTTCAGGTGTTGTCCGACTCGGTTGTCGGGGCAAAGGTCGCTATATCAAGATTGATGCAATTA ATTCGTCCCCGAGAAAATCTAGATGTCCCGAAGGAAGCTGGAATTTGTATCGATCGCGGGTTTATTCCTGGCGATCGTGA GCAAATGGAATCTGTGACTATGGTGGTGAATTTGCCGGAAATCAAAAGTAGATTTGGAGTTGACTTTGATTCTGGCGGCC AGGGGACCAAAGAAAATATTATCTCTCGCATGTCAAATCTACCTCTGCCGTTAGCAAATTTTGTGTCCCAATCGTCAACG ATTGTTCGTCGCGAAGAGAGAAAAATTGACGGTCGGAAAGGTGACGAATACGATCTCATCGACAAATCAGCCAAAACTGC TTCGTTCGAATGGTCCGCATTGCCTGGTGACGATGGTGTGCGTGAGCCCGGAATTGATGTAACGCTTGATTCTGACGAGG CGGTTAAAGATGAAGAACTCGGCTCACTCCTTGCAGCGTGGGATGTCATGTTGAATTCGCTCAAGCGTCGTTGA
Upstream 100 bases:
>100_bases TCGATCATCAAAGTGCATACCTTCCGGAGATGGCTAACGTGATGGCTGTCACAAAATATGCGGTTGCGAAGATCGCCAAA AGGGCAGACTGGGGTGACGT
Downstream 100 bases:
>100_bases ATTTTATCGGCTTGGTTTTCGGACAAGGCCGCGGGCTCAAGGGGTTCGATGTAGTGGCCTAATGAACCCGGACACTGATT TAGGCGAGAATGCTCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRANAYIKIIFTIALVQLAACNRHQDSSMSNLSQSMTESMRTVCVGRYTIDLPRSAAGLKIGQKINGIRIEAQYPANTEL LKRKVAEDAKPGAGKSASTLTGSPNNSPDSSIFQISEDGQGLHTIHGYMTKSDVLYSFTVQVLSDSVVGAKVAISRLMQL IRPRENLDVPKEAGICIDRGFIPGDREQMESVTMVVNLPEIKSRFGVDFDSGGQGTKENIISRMSNLPLPLANFVSQSST IVRREERKIDGRKGDEYDLIDKSAKTASFEWSALPGDDGVREPGIDVTLDSDEAVKDEELGSLLAAWDVMLNSLKRR
Sequences:
>Translated_317_residues MRANAYIKIIFTIALVQLAACNRHQDSSMSNLSQSMTESMRTVCVGRYTIDLPRSAAGLKIGQKINGIRIEAQYPANTEL LKRKVAEDAKPGAGKSASTLTGSPNNSPDSSIFQISEDGQGLHTIHGYMTKSDVLYSFTVQVLSDSVVGAKVAISRLMQL IRPRENLDVPKEAGICIDRGFIPGDREQMESVTMVVNLPEIKSRFGVDFDSGGQGTKENIISRMSNLPLPLANFVSQSST IVRREERKIDGRKGDEYDLIDKSAKTASFEWSALPGDDGVREPGIDVTLDSDEAVKDEELGSLLAAWDVMLNSLKRR >Mature_317_residues MRANAYIKIIFTIALVQLAACNRHQDSSMSNLSQSMTESMRTVCVGRYTIDLPRSAAGLKIGQKINGIRIEAQYPANTEL LKRKVAEDAKPGAGKSASTLTGSPNNSPDSSIFQISEDGQGLHTIHGYMTKSDVLYSFTVQVLSDSVVGAKVAISRLMQL IRPRENLDVPKEAGICIDRGFIPGDREQMESVTMVVNLPEIKSRFGVDFDSGGQGTKENIISRMSNLPLPLANFVSQSST IVRREERKIDGRKGDEYDLIDKSAKTASFEWSALPGDDGVREPGIDVTLDSDEAVKDEELGSLLAAWDVMLNSLKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34685; Mature: 34685
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRANAYIKIIFTIALVQLAACNRHQDSSMSNLSQSMTESMRTVCVGRYTIDLPRSAAGLK CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC IGQKINGIRIEAQYPANTELLKRKVAEDAKPGAGKSASTLTGSPNNSPDSSIFQISEDGQ CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCC GLHTIHGYMTKSDVLYSFTVQVLSDSVVGAKVAISRLMQLIRPRENLDVPKEAGICIDRG CEEHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC FIPGDREQMESVTMVVNLPEIKSRFGVDFDSGGQGTKENIISRMSNLPLPLANFVSQSST CCCCCHHHHHHEEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHH IVRREERKIDGRKGDEYDLIDKSAKTASFEWSALPGDDGVREPGIDVTLDSDEAVKDEEL HHHHHHHHCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHH GSLLAAWDVMLNSLKRR HHHHHHHHHHHHHHHCC >Mature Secondary Structure MRANAYIKIIFTIALVQLAACNRHQDSSMSNLSQSMTESMRTVCVGRYTIDLPRSAAGLK CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC IGQKINGIRIEAQYPANTELLKRKVAEDAKPGAGKSASTLTGSPNNSPDSSIFQISEDGQ CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCC GLHTIHGYMTKSDVLYSFTVQVLSDSVVGAKVAISRLMQLIRPRENLDVPKEAGICIDRG CEEHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC FIPGDREQMESVTMVVNLPEIKSRFGVDFDSGGQGTKENIISRMSNLPLPLANFVSQSST CCCCCHHHHHHEEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHH IVRREERKIDGRKGDEYDLIDKSAKTASFEWSALPGDDGVREPGIDVTLDSDEAVKDEEL HHHHHHHHCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHH GSLLAAWDVMLNSLKRR HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA