| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yjjL [C]
Identifier: 238024089
GI number: 238024089
Start: 781905
End: 782732
Strand: Reverse
Name: yjjL [C]
Synonym: bglu_2g06530
Alternate gene names: 238024089
Gene position: 782732-781905 (Counterclockwise)
Preceding gene: 238024091
Following gene: 238024088
Centisome position: 27.68
GC content: 65.7
Gene sequence:
>828_bases ATGTTCTCGCTGCTCGGCCTGGGCTTTGCGCCCATTCTGGCGACGCAGTTGCTGCGCATCGTGCCGTCGTGGCACTGGGT GTTCATGATTTCGGCTGCTCCGGGCCTGATCGTCGCCGTCCTGATCTCGCGCGTGCTGCGCGACAAGCCCAAGAGCGAGC TGCAGGGTCCTGCATCGGCCCAGGCTCGCCCGCGCTGGACCGGGCTCTTCGGCAGCCGCAACGTGTGGCTGGCGATGCTG GCGATCTTGTGCGCGATGAGCGGCATTTTCGTGGTCAGCGCGATGGTGCCGACTTATCTCGTCGAGGTGCTGCATCTCGA TACGCAGCAGATGGGGTTCGTCGTCTCGGCGATCGGCTTCGGTGGCTTCGTGGGCTCGTTCGGCGTGGCCGGCATATCGG ATTCCATCGGCCGGCGCAACGCCGCGCTGATCGCGTTCATCGGGGCGGCGGTCTTCCTGTATCTGTTCGCTCGGACGGGC GCCAACCAGCTGGCGTTGTTCGGGCTGCTGTTCGGTGTCTCGGTTTTTGCACTGGGACTGCTGGGATTGCTCAGCGGACC GATTGCAACCGAGGCCGCGCCGGCCGGACTCGTTGCGTCGTCGATCGGCTTTGTCTCGGGTGCAGGTGAAATCTTCGGGG GAGGTCTGGCACCGGCCGTTGCGGGTTTCGTTGCTCAGCATTTCGGCCTGCCGTCCACGCTGACTTTCGCGCTCGGCGGA CTCATCGCCGGCGCGGTGGTGTCGCTGTTCCTCGTCGAGACGTCGCCACGCCGGCGCGATAGCGCAATTCCCGTCGCTGC CGCCGGTGTGCCGGAAGACGTCGTCTAA
Upstream 100 bases:
>100_bases CCCATCAACAGGAGACACTCATGCAATCTCATTTATCCAACGAGCCGGCGAAGCGTCCCTGCCCTCGCGGCGCGGCTTCA ACCAGGGCCTCCAGCTGAGC
Downstream 100 bases:
>100_bases GGCACCGGCCCGGGCGCCCGCCCCCTCCCCCCGGATCGATTCAATTCCTACACACAGGTGGCGTCGGCGTGACGCGAAAC CTGGAACACCTCAAACAAGG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Family Transporter; General Substrate Transporter Facilitator Superfamily; Facilitator Superfamily Transporter; Facilitator Family Transporter Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MFSLLGLGFAPILATQLLRIVPSWHWVFMISAAPGLIVAVLISRVLRDKPKSELQGPASAQARPRWTGLFGSRNVWLAML AILCAMSGIFVVSAMVPTYLVEVLHLDTQQMGFVVSAIGFGGFVGSFGVAGISDSIGRRNAALIAFIGAAVFLYLFARTG ANQLALFGLLFGVSVFALGLLGLLSGPIATEAAPAGLVASSIGFVSGAGEIFGGGLAPAVAGFVAQHFGLPSTLTFALGG LIAGAVVSLFLVETSPRRRDSAIPVAAAGVPEDVV
Sequences:
>Translated_275_residues MFSLLGLGFAPILATQLLRIVPSWHWVFMISAAPGLIVAVLISRVLRDKPKSELQGPASAQARPRWTGLFGSRNVWLAML AILCAMSGIFVVSAMVPTYLVEVLHLDTQQMGFVVSAIGFGGFVGSFGVAGISDSIGRRNAALIAFIGAAVFLYLFARTG ANQLALFGLLFGVSVFALGLLGLLSGPIATEAAPAGLVASSIGFVSGAGEIFGGGLAPAVAGFVAQHFGLPSTLTFALGG LIAGAVVSLFLVETSPRRRDSAIPVAAAGVPEDVV >Mature_275_residues MFSLLGLGFAPILATQLLRIVPSWHWVFMISAAPGLIVAVLISRVLRDKPKSELQGPASAQARPRWTGLFGSRNVWLAML AILCAMSGIFVVSAMVPTYLVEVLHLDTQQMGFVVSAIGFGGFVGSFGVAGISDSIGRRNAALIAFIGAAVFLYLFARTG ANQLALFGLLFGVSVFALGLLGLLSGPIATEAAPAGLVASSIGFVSGAGEIFGGGLAPAVAGFVAQHFGLPSTLTFALGG LIAGAVVSLFLVETSPRRRDSAIPVAAAGVPEDVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28213; Mature: 28213
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLLGLGFAPILATQLLRIVPSWHWVFMISAAPGLIVAVLISRVLRDKPKSELQGPASA CCCHHHCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCCC QARPRWTGLFGSRNVWLAMLAILCAMSGIFVVSAMVPTYLVEVLHLDTQQMGFVVSAIGF CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GGFVGSFGVAGISDSIGRRNAALIAFIGAAVFLYLFARTGANQLALFGLLFGVSVFALGL HHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LGLLSGPIATEAAPAGLVASSIGFVSGAGEIFGGGLAPAVAGFVAQHFGLPSTLTFALGG HHHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHH LIAGAVVSLFLVETSPRRRDSAIPVAAAGVPEDVV HHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MFSLLGLGFAPILATQLLRIVPSWHWVFMISAAPGLIVAVLISRVLRDKPKSELQGPASA CCCHHHCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCCC QARPRWTGLFGSRNVWLAMLAILCAMSGIFVVSAMVPTYLVEVLHLDTQQMGFVVSAIGF CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GGFVGSFGVAGISDSIGRRNAALIAFIGAAVFLYLFARTGANQLALFGLLFGVSVFALGL HHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LGLLSGPIATEAAPAGLVASSIGFVSGAGEIFGGGLAPAVAGFVAQHFGLPSTLTFALGG HHHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHH LIAGAVVSLFLVETSPRRRDSAIPVAAAGVPEDVV HHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA