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The map label for this gene is nahR [H]

Identifier: 238024078

GI number: 238024078

Start: 767661

End: 768566

Strand: Direct

Name: nahR [H]

Synonym: bglu_2g06390

Alternate gene names: 238024078

Gene position: 767661-768566 (Clockwise)

Preceding gene: 238024072

Following gene: 238024079

Centisome position: 27.15

GC content: 69.09

Gene sequence:

>906_bases
ATGAATAATCTGAAGCGGATCGACCTCAACCTGCTGGTGACCCTGCAGGCCCTGATGACGGAGAAGCACATCTCTCGCAC
CGCCATGCGCCTGCACAAGAGCCAGCCGGCGATCAGCCATGCGCTGGCGCATCTGCGCGACATCTTCAACGACCCGCTGC
TGGTGAGGCGCGGCGGGGGGCTGGAGCTGACCTCGCGCGCCAGCGAACTGATGCAGCCGCTGTCGGACGCGCTGGACCAG
CTCAGCGCGCTGCTCGAGCCGCCCGAGTTCGATCCCTCGCAGGCGCAGCGCGTGTTTCGCGTGTCGATGTCCGATTACGG
CGCGCGCATCGTGCTGCCCAAGCTGGTGCGCATGCTGCGCGCGAACGCGCCGGGCATCGAGCTGGTGGTCAGCCAGGCCA
ATCGCGAGGCGATGCGCATGCAGGTGATGGACGGCGAGGTCGACCTCGCGCTCGGCGTGTTCCCGCCGCCGTCCCCCGAG
CTGCACACCGAGACGCTGTTCGTCGAGACCTTCGCCTGCCTGGCCGACGCGGCCAGCATGCCGGCCTCGCGCATGCTCGA
CCTGGAGGCCTGGCTGGCGCGCCCGCATGCGCTGGTGGCGATGCGCGCCGGCACCGACAACGAGATCGACCGCGCGCTCG
CGCAATTGCGCGCCGAGCGCCGCATCGCGGTGATCCTGCCGCACTGGGGCGTGGCCAACGAGTTGGTCGTCGATACCGAC
CTGGTGCTGACGGTGGCGCGGCGCAACCTCGACGCGGTGCGCGACGACGCACGGCTGTGCGTATTCGATCCGCCGTTTCC
GGTCGAATCCTTCGAGTTTCAGCAAATGTGGCATCAGCGCCGGCAGGGCGACCCCGCGCACAGCTGGCTGCGCCAGATGA
TCGCGCGGGTGGTGCGCGACCGCTGA

Upstream 100 bases:

>100_bases
GGCATCGTTCGTCCATCACGCAGTGGTTGTGTTCGGGCCGATTCTCTTATATTAGCTATCTGAATTAAAATTCTTAGTAA
TCATCCTGGCAATTCAAATC

Downstream 100 bases:

>100_bases
TTCCCGCCCGCCGCTGCGGGCGGGCTTTCCCTTCGCTTTTCCACCGCGGCCGCTTTCCCGGGCCGTATTGAATAGCCGGC
CCCGTGCGAGGTAATTGCAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNNLKRIDLNLLVTLQALMTEKHISRTAMRLHKSQPAISHALAHLRDIFNDPLLVRRGGGLELTSRASELMQPLSDALDQ
LSALLEPPEFDPSQAQRVFRVSMSDYGARIVLPKLVRMLRANAPGIELVVSQANREAMRMQVMDGEVDLALGVFPPPSPE
LHTETLFVETFACLADAASMPASRMLDLEAWLARPHALVAMRAGTDNEIDRALAQLRAERRIAVILPHWGVANELVVDTD
LVLTVARRNLDAVRDDARLCVFDPPFPVESFEFQQMWHQRRQGDPAHSWLRQMIARVVRDR

Sequences:

>Translated_301_residues
MNNLKRIDLNLLVTLQALMTEKHISRTAMRLHKSQPAISHALAHLRDIFNDPLLVRRGGGLELTSRASELMQPLSDALDQ
LSALLEPPEFDPSQAQRVFRVSMSDYGARIVLPKLVRMLRANAPGIELVVSQANREAMRMQVMDGEVDLALGVFPPPSPE
LHTETLFVETFACLADAASMPASRMLDLEAWLARPHALVAMRAGTDNEIDRALAQLRAERRIAVILPHWGVANELVVDTD
LVLTVARRNLDAVRDDARLCVFDPPFPVESFEFQQMWHQRRQGDPAHSWLRQMIARVVRDR
>Mature_301_residues
MNNLKRIDLNLLVTLQALMTEKHISRTAMRLHKSQPAISHALAHLRDIFNDPLLVRRGGGLELTSRASELMQPLSDALDQ
LSALLEPPEFDPSQAQRVFRVSMSDYGARIVLPKLVRMLRANAPGIELVVSQANREAMRMQVMDGEVDLALGVFPPPSPE
LHTETLFVETFACLADAASMPASRMLDLEAWLARPHALVAMRAGTDNEIDRALAQLRAERRIAVILPHWGVANELVVDTD
LVLTVARRNLDAVRDDARLCVFDPPFPVESFEFQQMWHQRRQGDPAHSWLRQMIARVVRDR

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=303, Percent_Identity=24.0924092409241, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790147, Length=299, Percent_Identity=24.0802675585284, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081766, Length=126, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33921; Mature: 33921

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50931 HTH_LYSR ; PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLKRIDLNLLVTLQALMTEKHISRTAMRLHKSQPAISHALAHLRDIFNDPLLVRRGGG
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCC
LELTSRASELMQPLSDALDQLSALLEPPEFDPSQAQRVFRVSMSDYGARIVLPKLVRMLR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
ANAPGIELVVSQANREAMRMQVMDGEVDLALGVFPPPSPELHTETLFVETFACLADAASM
CCCCCCEEEEEHHCHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
PASRMLDLEAWLARPHALVAMRAGTDNEIDRALAQLRAERRIAVILPHWGVANELVVDTD
CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECHH
LVLTVARRNLDAVRDDARLCVFDPPFPVESFEFQQMWHQRRQGDPAHSWLRQMIARVVRD
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure
MNNLKRIDLNLLVTLQALMTEKHISRTAMRLHKSQPAISHALAHLRDIFNDPLLVRRGGG
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCC
LELTSRASELMQPLSDALDQLSALLEPPEFDPSQAQRVFRVSMSDYGARIVLPKLVRMLR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
ANAPGIELVVSQANREAMRMQVMDGEVDLALGVFPPPSPELHTETLFVETFACLADAASM
CCCCCCEEEEEHHCHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
PASRMLDLEAWLARPHALVAMRAGTDNEIDRALAQLRAERRIAVILPHWGVANELVVDTD
CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECHH
LVLTVARRNLDAVRDDARLCVFDPPFPVESFEFQQMWHQRRQGDPAHSWLRQMIARVVRD
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]