| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024077
Identifier: 238024077
GI number: 238024077
Start: 766990
End: 767565
Strand: Reverse
Name: 238024077
Synonym: bglu_2g06380
Alternate gene names: NA
Gene position: 767565-766990 (Counterclockwise)
Preceding gene: 238024084
Following gene: 238024076
Centisome position: 27.15
GC content: 73.78
Gene sequence:
>576_bases ATGCCAACCTCTCTTTCGCTCTCGACCGCCACCCTCGCCGGCGCCGCCCTGGTGGCGGGCGCCCTGGTGCCACTGCAGGC CGGCAGCAACGCCGCGCTGGGCCGCGCGCTCGGCCATCCGCTGTGGGCCACCGTCGCCTCCCTGCTGGTCAGCCTGCTGT GCGTGCTGCCGGCGCTGTTCGTGTTCCACGCGCAGGCGCCGCTGCTCGGCCGCGCGGCGCAACTGCCGGTGTGGATCTGG TTCGGCGGCGTCGCCGGCGTGATCTACATCACCTCGGCCCTGGTGCTGACGCCGCGCCTGGGCGCGACCAGCTTCATCGT CAGCGTGATCGCCGGCCAGATGCTGACCTCGCTGCTGATCGACAACTACGGGCTGATGGGGCTGCCCGTGAAGCCCGCCA ATCCCGGACGGGTGGCCGGCGTGCTGCTGATCCTCGCGGGCATGCTGCTGGTGCAATGGTTCACGCCGGCGACGCGGCCG GCCGCCGGCCAAGCCGGCGCAGGCGCCCGCCCCAGCGCCGAGGCCGGCCCCCACGCCGCCCGCGAGATCGAGCCGAACGC GCATCCCCACACCTGA
Upstream 100 bases:
>100_bases TTCATGATTTGAATTGCCAGGATGATTACTAAGAATTTTAATTCAGATAGCTAATATAAGAGAATCGGCCCGAACACAAC CACTGCGTGATGGACGAACG
Downstream 100 bases:
>100_bases TCCGGCCTGCGGGCCGATTTCCGCGTACTCGAGACACCCATGAAATCGTCACAACTGATTCTTGTCGGCACCGCCATGGC GGTGGTGTTCGGCGGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MPTSLSLSTATLAGAALVAGALVPLQAGSNAALGRALGHPLWATVASLLVSLLCVLPALFVFHAQAPLLGRAAQLPVWIW FGGVAGVIYITSALVLTPRLGATSFIVSVIAGQMLTSLLIDNYGLMGLPVKPANPGRVAGVLLILAGMLLVQWFTPATRP AAGQAGAGARPSAEAGPHAAREIEPNAHPHT
Sequences:
>Translated_191_residues MPTSLSLSTATLAGAALVAGALVPLQAGSNAALGRALGHPLWATVASLLVSLLCVLPALFVFHAQAPLLGRAAQLPVWIW FGGVAGVIYITSALVLTPRLGATSFIVSVIAGQMLTSLLIDNYGLMGLPVKPANPGRVAGVLLILAGMLLVQWFTPATRP AAGQAGAGARPSAEAGPHAAREIEPNAHPHT >Mature_190_residues PTSLSLSTATLAGAALVAGALVPLQAGSNAALGRALGHPLWATVASLLVSLLCVLPALFVFHAQAPLLGRAAQLPVWIWF GGVAGVIYITSALVLTPRLGATSFIVSVIAGQMLTSLLIDNYGLMGLPVKPANPGRVAGVLLILAGMLLVQWFTPATRPA AGQAGAGARPSAEAGPHAAREIEPNAHPHT
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19340; Mature: 19209
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSLSLSTATLAGAALVAGALVPLQAGSNAALGRALGHPLWATVASLLVSLLCVLPALF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VFHAQAPLLGRAAQLPVWIWFGGVAGVIYITSALVLTPRLGATSFIVSVIAGQMLTSLLI HHHCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DNYGLMGLPVKPANPGRVAGVLLILAGMLLVQWFTPATRPAAGQAGAGARPSAEAGPHAA HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH REIEPNAHPHT HHCCCCCCCCC >Mature Secondary Structure PTSLSLSTATLAGAALVAGALVPLQAGSNAALGRALGHPLWATVASLLVSLLCVLPALF CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VFHAQAPLLGRAAQLPVWIWFGGVAGVIYITSALVLTPRLGATSFIVSVIAGQMLTSLLI HHHCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DNYGLMGLPVKPANPGRVAGVLLILAGMLLVQWFTPATRPAAGQAGAGARPSAEAGPHAA HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH REIEPNAHPHT HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA