| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024072
Identifier: 238024072
GI number: 238024072
Start: 759494
End: 760324
Strand: Direct
Name: 238024072
Synonym: bglu_2g06330
Alternate gene names: NA
Gene position: 759494-760324 (Clockwise)
Preceding gene: 238024070
Following gene: 238024078
Centisome position: 26.86
GC content: 66.19
Gene sequence:
>831_bases GTGGTCGAGATATTTGGCAAGCTTGGGAAAATCATATCCAGCACCGGTACCGAGCGCTTTACCTCGGATCTGCACGCATT GCTCGTCGGATCCGTGAACGTAGAGTCGACCCGGATCACCGCCTGGTCCGTCAACGAGGTGAAGGGCGAGATCGTCGGTG TCCATCTGCTGGGCGCGTTCGCGTCCCACGATCAGGACATCCGCCCCAATCAGGCACCGCCGCCCGCCGTCCTGAAGGAC GAGCTGTACCGCGGCATGGCCGAGGACCCGCTGTCCAAGCGCATCCTGGCCGCCTCCGACACGCAGCTGATCCACATGAA CACGGCGCGCCCCGGCGAGGGCGCGTTCGACGCGATCCAGCCGGGCCGGCTCGGCTTCCAGTGTCATCTGGTATCGCGCA AGGCGAACCGCCGCTACGTGATCTCGCTGTACCGGCCCGACCAGGCCTACGACTTCACGCTGCAGGAAATGACGTTCCTC AAGAGCTGCGCGGAGATACTGATGCCGCTCGTCGAGATGCACGCCTCGCACCGCCGCTATGCGATGCCGGGCCGCCCGGC CGCGTCGGCGGACAGCGCGGGCGATTCCAGCACGCGTCACGAGTCGCTGCGCCGCGAGTTCGAGCGCCGGCTGACGAGTG CCTCCGTGGTGCTGTCAGAGCGCGAGATCGAGGTGTGCGTCGGCCTGCTGACCGGCAGCACGTTTCGCGAGATGGCCGAC GCGCTCGGCGTCAAGCACAGCACGATCGAGACGTACATCAAGCGGGCAGCGGCGAAGCTCGGCTTCAAGGGGCGCCACGG CCTCGTGAAGTGGGTGCTCGACGAATCGTGA
Upstream 100 bases:
>100_bases CGGCGCAGGGCGCCGGCGTGAGGCGGTCTTCGCCGCGGGTAGGGCGGCGGCCGGCGGTGTCACGCCGGACTCAACAACAA CACATTCCGAGGAAAACGAC
Downstream 100 bases:
>100_bases GCGCGGCGGGCCGGACGAGGGCTGCCGCGCGTGCCCCGCGCGGGCTTGCCCGGGCCGGCGCAGGTCGACAGGCACGCCCG GCGGCTCCCGCCGCGGCGCG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein LuxR; LuxR Family Regulatory Protein; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator LuxR Family; Transcriptional Regulator SyrR
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MVEIFGKLGKIISSTGTERFTSDLHALLVGSVNVESTRITAWSVNEVKGEIVGVHLLGAFASHDQDIRPNQAPPPAVLKD ELYRGMAEDPLSKRILAASDTQLIHMNTARPGEGAFDAIQPGRLGFQCHLVSRKANRRYVISLYRPDQAYDFTLQEMTFL KSCAEILMPLVEMHASHRRYAMPGRPAASADSAGDSSTRHESLRREFERRLTSASVVLSEREIEVCVGLLTGSTFREMAD ALGVKHSTIETYIKRAAAKLGFKGRHGLVKWVLDES
Sequences:
>Translated_276_residues MVEIFGKLGKIISSTGTERFTSDLHALLVGSVNVESTRITAWSVNEVKGEIVGVHLLGAFASHDQDIRPNQAPPPAVLKD ELYRGMAEDPLSKRILAASDTQLIHMNTARPGEGAFDAIQPGRLGFQCHLVSRKANRRYVISLYRPDQAYDFTLQEMTFL KSCAEILMPLVEMHASHRRYAMPGRPAASADSAGDSSTRHESLRREFERRLTSASVVLSEREIEVCVGLLTGSTFREMAD ALGVKHSTIETYIKRAAAKLGFKGRHGLVKWVLDES >Mature_276_residues MVEIFGKLGKIISSTGTERFTSDLHALLVGSVNVESTRITAWSVNEVKGEIVGVHLLGAFASHDQDIRPNQAPPPAVLKD ELYRGMAEDPLSKRILAASDTQLIHMNTARPGEGAFDAIQPGRLGFQCHLVSRKANRRYVISLYRPDQAYDFTLQEMTFL KSCAEILMPLVEMHASHRRYAMPGRPAASADSAGDSSTRHESLRREFERRLTSASVVLSEREIEVCVGLLTGSTFREMAD ALGVKHSTIETYIKRAAAKLGFKGRHGLVKWVLDES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30506; Mature: 30506
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIFGKLGKIISSTGTERFTSDLHALLVGSVNVESTRITAWSVNEVKGEIVGVHLLGAF CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCEEEHHHHHHH ASHDQDIRPNQAPPPAVLKDELYRGMAEDPLSKRILAASDTQLIHMNTARPGEGAFDAIQ HCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHEEECCCCEEEEEECCCCCCCCCCCCC PGRLGFQCHLVSRKANRRYVISLYRPDQAYDFTLQEMTFLKSCAEILMPLVEMHASHRRY CCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AMPGRPAASADSAGDSSTRHESLRREFERRLTSASVVLSEREIEVCVGLLTGSTFREMAD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ALGVKHSTIETYIKRAAAKLGFKGRHGLVKWVLDES HHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC >Mature Secondary Structure MVEIFGKLGKIISSTGTERFTSDLHALLVGSVNVESTRITAWSVNEVKGEIVGVHLLGAF CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCEEEHHHHHHH ASHDQDIRPNQAPPPAVLKDELYRGMAEDPLSKRILAASDTQLIHMNTARPGEGAFDAIQ HCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHEEECCCCEEEEEECCCCCCCCCCCCC PGRLGFQCHLVSRKANRRYVISLYRPDQAYDFTLQEMTFLKSCAEILMPLVEMHASHRRY CCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AMPGRPAASADSAGDSSTRHESLRREFERRLTSASVVLSEREIEVCVGLLTGSTFREMAD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ALGVKHSTIETYIKRAAAKLGFKGRHGLVKWVLDES HHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA