| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024051
Identifier: 238024051
GI number: 238024051
Start: 736224
End: 737168
Strand: Direct
Name: 238024051
Synonym: bglu_2g06110
Alternate gene names: NA
Gene position: 736224-737168 (Clockwise)
Preceding gene: 238024048
Following gene: 238024052
Centisome position: 26.04
GC content: 68.36
Gene sequence:
>945_bases ATGAAGCCGTGCAAGACCCTAGTGCTGGCCGCGGCGCTGGCCGTCGCGCTGCCGTCGCCGTCGTTTGCCCGGGATGCCGC CGCTTGCCGAGCGGTGCGGTTCGCCGATATCGGCTGGACCGACATCACGTCCACCACGGCGCTCGCGTCGGTGCTGTTCG AGGCGCTCGGCTACCGGCCCAGCACGACCATCGCCTCGGTGCCGATTTCGTTCGCGGGCCTGAAGTCCGGGCAGATCGAC GTCTCCCTCGGCTACTGGTGGCCGGTGCAGCAAAAGCAGATCCAGCCGTTCCTCGACGCGAAGTCGATCACGGTGCTGCA GCCGCCGAACCTGTCCGGCGCGAAGACCACGCTGGCGGTGCCGGACTATGCCTATCAGGCCGGGCTCAAGCGCTTTAACG ACATCGCCGGGCATCGCGCCGAACTCGGCGGCAGGATCTACGGGATCGAGGCCGGCAGCAGCGCGAACGCGACGATCCAG AAGATGATCGACACCAATCAGTACGGCCTGGCCGGCTTCAAGCTCGTCGAGTCGAGCGAGGCCGGCATGCTGGTGACGGT GGCGCGTGCCGTGCGCGAGAAGCAATGGGTGGTGTTCCTCGGCTGGGAGCCGCACCCGATGAACATCCAGCTGCCGATGC ACTACCTGGCGGGCGGCGACGCGTCGTTCGGCCCGAACTATGGCGAGGCGCGCGTCTACACGCTGACCGCGAACGGCTTC GCCGAGCGCTGCCCGAACGCGGGCCGGCTGGTGTCGAACCTGCGCTTCACCACCGACATGGAAAACCAGCTGATGCTCGC CGTGATGAACCGGACGCGGCCCGCCGAGGCGGCCAAGGACTACATCCGCAAGCATCCGCAGCTGCTCGACGGCTGGCTGG CCGGCGTGACGAGCTACGACGGCAGGGACGGCCTCGCCACCGTGAAGGCCGCGCTCGGCCCCTGA
Upstream 100 bases:
>100_bases GCCTCGCGGCGAATATGGCCCGTTATCTTGCCTGCACGGTGCAGGCCGCATCCCCCCTCCTCACGACGGCCTGCCTGGAA CCGCCGAACAGGGAGCCATC
Downstream 100 bases:
>100_bases CGCGGGCCGGCGCCGGCGGCCCGCCCTTTCCCTAGCGAACGGACGCGCGGCGTCCACGCAACCCATGAGGCGAACACCAT GAACCATGACGTGATAGTGA
Product: quaternary amine uptake ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: Fragment [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKPCKTLVLAAALAVALPSPSFARDAAACRAVRFADIGWTDITSTTALASVLFEALGYRPSTTIASVPISFAGLKSGQID VSLGYWWPVQQKQIQPFLDAKSITVLQPPNLSGAKTTLAVPDYAYQAGLKRFNDIAGHRAELGGRIYGIEAGSSANATIQ KMIDTNQYGLAGFKLVESSEAGMLVTVARAVREKQWVVFLGWEPHPMNIQLPMHYLAGGDASFGPNYGEARVYTLTANGF AERCPNAGRLVSNLRFTTDMENQLMLAVMNRTRPAEAAKDYIRKHPQLLDGWLAGVTSYDGRDGLATVKAALGP
Sequences:
>Translated_314_residues MKPCKTLVLAAALAVALPSPSFARDAAACRAVRFADIGWTDITSTTALASVLFEALGYRPSTTIASVPISFAGLKSGQID VSLGYWWPVQQKQIQPFLDAKSITVLQPPNLSGAKTTLAVPDYAYQAGLKRFNDIAGHRAELGGRIYGIEAGSSANATIQ KMIDTNQYGLAGFKLVESSEAGMLVTVARAVREKQWVVFLGWEPHPMNIQLPMHYLAGGDASFGPNYGEARVYTLTANGF AERCPNAGRLVSNLRFTTDMENQLMLAVMNRTRPAEAAKDYIRKHPQLLDGWLAGVTSYDGRDGLATVKAALGP >Mature_314_residues MKPCKTLVLAAALAVALPSPSFARDAAACRAVRFADIGWTDITSTTALASVLFEALGYRPSTTIASVPISFAGLKSGQID VSLGYWWPVQQKQIQPFLDAKSITVLQPPNLSGAKTTLAVPDYAYQAGLKRFNDIAGHRAELGGRIYGIEAGSSANATIQ KMIDTNQYGLAGFKLVESSEAGMLVTVARAVREKQWVVFLGWEPHPMNIQLPMHYLAGGDASFGPNYGEARVYTLTANGF AERCPNAGRLVSNLRFTTDMENQLMLAVMNRTRPAEAAKDYIRKHPQLLDGWLAGVTSYDGRDGLATVKAALGP
Specific function: Unknown
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 33811; Mature: 33811
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPCKTLVLAAALAVALPSPSFARDAAACRAVRFADIGWTDITSTTALASVLFEALGYRP CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCC STTIASVPISFAGLKSGQIDVSLGYWWPVQQKQIQPFLDAKSITVLQPPNLSGAKTTLAV CCEEEECCEEEECCCCCCEEEEEEEECCCCHHHCCHHCCCCCEEEECCCCCCCCEEEEEC PDYAYQAGLKRFNDIAGHRAELGGRIYGIEAGSSANATIQKMIDTNQYGLAGFKLVESSE CCHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEECCC AGMLVTVARAVREKQWVVFLGWEPHPMNIQLPMHYLAGGDASFGPNYGEARVYTLTANGF CCCHHHHHHHHHCCCEEEEECCCCCCCEEEECHHEECCCCCCCCCCCCCEEEEEEECCCH AERCPNAGRLVSNLRFTTDMENQLMLAVMNRTRPAEAAKDYIRKHPQLLDGWLAGVTSYD HHHCCCHHHHHHHCEEEECCCCCEEEEEHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCC GRDGLATVKAALGP CCCCHHHHHHHCCC >Mature Secondary Structure MKPCKTLVLAAALAVALPSPSFARDAAACRAVRFADIGWTDITSTTALASVLFEALGYRP CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCC STTIASVPISFAGLKSGQIDVSLGYWWPVQQKQIQPFLDAKSITVLQPPNLSGAKTTLAV CCEEEECCEEEECCCCCCEEEEEEEECCCCHHHCCHHCCCCCEEEECCCCCCCCEEEEEC PDYAYQAGLKRFNDIAGHRAELGGRIYGIEAGSSANATIQKMIDTNQYGLAGFKLVESSE CCHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEECCC AGMLVTVARAVREKQWVVFLGWEPHPMNIQLPMHYLAGGDASFGPNYGEARVYTLTANGF CCCHHHHHHHHHCCCEEEEECCCCCCCEEEECHHEECCCCCCCCCCCCCEEEEEEECCCH AERCPNAGRLVSNLRFTTDMENQLMLAVMNRTRPAEAAKDYIRKHPQLLDGWLAGVTSYD HHHCCCHHHHHHHCEEEECCCCCEEEEEHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCC GRDGLATVKAALGP CCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10708384 [H]