| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024023
Identifier: 238024023
GI number: 238024023
Start: 693541
End: 694728
Strand: Direct
Name: 238024023
Synonym: bglu_2g05770
Alternate gene names: NA
Gene position: 693541-694728 (Clockwise)
Preceding gene: 238024022
Following gene: 238024024
Centisome position: 24.53
GC content: 67.0
Gene sequence:
>1188_bases ATGGCATTTCTGGTCTTCAACCGTTCCACCAAGTTCGATTTCTACAACTGGCTTGCCGATGCGCAGCAGGACGTATATGC GCTGACGAGCAAGCCGATGAACCGGCCCGGCAAGTACCGGATGATCCGCAAGTTCGACGACCTGGGCGCGCCGCTGGCCG ACCAGCTCGCCCTGGAGCTGGGCCGGACCGCGCCGATCGGTTTCATCGCTTCCCAGTCCGAATACGACATGCTGCGCGTC GCGGCGCTGCGCGAGGCGCTCGGCCTGCCGGGGCAATCGGTGCAGAGCGCGCGCGCCTATCGTGACAAGGTGCTGATGAA GGACCACATGGCGGCCGCCGGCATTCCGACGGCGCGCTACCGGCGCCTGGCGCTGGCGCCCGATCTGCCCGGCTTCATCG AGGAGCACGGCTATCCGGTCGTGGTCAAGCCGGTGGACGCCGCCGGCTCGCGCGGCGTGCGCGTGCTGCGCGAGGCGCGC GATCTGCATGATTTCCAGCGTGAGCAGACAGCGCGGCAATACATGGTGGAGACCTTCGTCGAAGGCACGATGTTCCATGT CAACGGGCTGTTGCGCGGCGGGCGCTATGAGTTCATCGTGCCTTACCGCTACGTGAATTCGTCGCTCGACTACCAGGCCG CCGGCTGTTACGGCAGCCTGACGATGCAGCCCGACACCGAGCTCGGCGAGCGGCTGGTGACGTTCTGCAAGCGGGTGATC GCGGCGCTGCCGGCCACCGATCCGCTCGCGTTCCATGCCGAGATCTTCTGTGCGCCCGACGGTACGCTGCTGCTCAACGA AATCGCGAGCCGTACCGCCGGCTCGCTGATCATCGAGCTGATCGAGCAGGACTACGGCTTCAACCTGAGCCGCGCCTGGG TGCGCGCGCAGTGCGGGCTCGACAGCGGCATCGGTGAGGTGCGGCGCCCGGCACGCTATTCGGCGTCGCTGATGTTCCCG ACTCGCGAGGCGGTCCTGCGCGCGCTGCCGTTGACCTTGCCGTTCGAGTGGTGCACGAACGTCTACGTGAACGGACGTCA GGGCGTCGTGAACGGCCGCGCGGCGTCCTATACCGACGACGTGCTGAGCGTGATCGTCAGTGGCGAGAGCGAGGCCGAGA CGAGCGAGCGCGTCGCGCAGGCCAGCGCCTGGCTCGGCGAGCGCATCGAATGGCAGGCGTCGCATTGA
Upstream 100 bases:
>100_bases GAGCGCGCGGCGCGAGGCAAGGGGGGGGGCGCGATCCAGGTCCACGTTCGTTTCGCGCTGGCAGTCGTCACAACAGGTTC GAACCGAGGCAATGACAATC
Downstream 100 bases:
>100_bases GCGCCGCGTGCCGGTGAGTCGCCCCGCGCGCGAGCCGGCGCGGCTCGACGCCGCGTTCGCGAAGCCGCCGGCGGCGGCCG GGCCGCTGGTGGTTGCGCTC
Product: ATP-dependent carboxylate-amine ligase domain-containing protein
Products: NA
Alternate protein names: Nikkomycin Biosynthesis Protein Carboxylase; Amino Acid Ligase Of ATP-Grasp Superfamily; Phosphoribosylglycinamide Synthetase; NikS Protein; Carboxylase; HsvC Protein; ATP-Grasp Domain-Containing Protein; ATP-Dependent Carboxylate-Amine Ligase; Nikkomycin Biosynthesis Protein SanS; Nikkomycin Biosynthesis Protein; Biotin Carboxylase-Like; Carbamoyl-Phosphate-Synthetase; D-Alanine-D-Alanine Ligase A; Phosphoribosylglycinamide Synthetase ATP-Grasp Domain; CarB Family Protein; LOW QUALITY PROTEIN Biotin Carboxylase; Biotin Carboxylase-Like Protein; Nikkomycin Biosynthesis Domain Protein
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAFLVFNRSTKFDFYNWLADAQQDVYALTSKPMNRPGKYRMIRKFDDLGAPLADQLALELGRTAPIGFIASQSEYDMLRV AALREALGLPGQSVQSARAYRDKVLMKDHMAAAGIPTARYRRLALAPDLPGFIEEHGYPVVVKPVDAAGSRGVRVLREAR DLHDFQREQTARQYMVETFVEGTMFHVNGLLRGGRYEFIVPYRYVNSSLDYQAAGCYGSLTMQPDTELGERLVTFCKRVI AALPATDPLAFHAEIFCAPDGTLLLNEIASRTAGSLIIELIEQDYGFNLSRAWVRAQCGLDSGIGEVRRPARYSASLMFP TREAVLRALPLTLPFEWCTNVYVNGRQGVVNGRAASYTDDVLSVIVSGESEAETSERVAQASAWLGERIEWQASH
Sequences:
>Translated_395_residues MAFLVFNRSTKFDFYNWLADAQQDVYALTSKPMNRPGKYRMIRKFDDLGAPLADQLALELGRTAPIGFIASQSEYDMLRV AALREALGLPGQSVQSARAYRDKVLMKDHMAAAGIPTARYRRLALAPDLPGFIEEHGYPVVVKPVDAAGSRGVRVLREAR DLHDFQREQTARQYMVETFVEGTMFHVNGLLRGGRYEFIVPYRYVNSSLDYQAAGCYGSLTMQPDTELGERLVTFCKRVI AALPATDPLAFHAEIFCAPDGTLLLNEIASRTAGSLIIELIEQDYGFNLSRAWVRAQCGLDSGIGEVRRPARYSASLMFP TREAVLRALPLTLPFEWCTNVYVNGRQGVVNGRAASYTDDVLSVIVSGESEAETSERVAQASAWLGERIEWQASH >Mature_394_residues AFLVFNRSTKFDFYNWLADAQQDVYALTSKPMNRPGKYRMIRKFDDLGAPLADQLALELGRTAPIGFIASQSEYDMLRVA ALREALGLPGQSVQSARAYRDKVLMKDHMAAAGIPTARYRRLALAPDLPGFIEEHGYPVVVKPVDAAGSRGVRVLREARD LHDFQREQTARQYMVETFVEGTMFHVNGLLRGGRYEFIVPYRYVNSSLDYQAAGCYGSLTMQPDTELGERLVTFCKRVIA ALPATDPLAFHAEIFCAPDGTLLLNEIASRTAGSLIIELIEQDYGFNLSRAWVRAQCGLDSGIGEVRRPARYSASLMFPT REAVLRALPLTLPFEWCTNVYVNGRQGVVNGRAASYTDDVLSVIVSGESEAETSERVAQASAWLGERIEWQASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43966; Mature: 43834
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLVFNRSTKFDFYNWLADAQQDVYALTSKPMNRPGKYRMIRKFDDLGAPLADQLALEL CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH GRTAPIGFIASQSEYDMLRVAALREALGLPGQSVQSARAYRDKVLMKDHMAAAGIPTARY CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH RRLALAPDLPGFIEEHGYPVVVKPVDAAGSRGVRVLREARDLHDFQREQTARQYMVETFV HEEEECCCCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGTMFHVNGLLRGGRYEFIVPYRYVNSSLDYQAAGCYGSLTMQPDTELGERLVTFCKRVI CCHHEEEHHHHCCCCEEEEEEHHHHCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHH AALPATDPLAFHAEIFCAPDGTLLLNEIASRTAGSLIIELIEQDYGFNLSRAWVRAQCGL HHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC DSGIGEVRRPARYSASLMFPTREAVLRALPLTLPFEWCTNVYVNGRQGVVNGRAASYTDD CCCHHHHCCCCCCCCEEECCCHHHHHHHCCCCCCHHHHCCEEECCCCCEECCCCCCHHHH VLSVIVSGESEAETSERVAQASAWLGERIEWQASH HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure AFLVFNRSTKFDFYNWLADAQQDVYALTSKPMNRPGKYRMIRKFDDLGAPLADQLALEL EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH GRTAPIGFIASQSEYDMLRVAALREALGLPGQSVQSARAYRDKVLMKDHMAAAGIPTARY CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH RRLALAPDLPGFIEEHGYPVVVKPVDAAGSRGVRVLREARDLHDFQREQTARQYMVETFV HEEEECCCCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGTMFHVNGLLRGGRYEFIVPYRYVNSSLDYQAAGCYGSLTMQPDTELGERLVTFCKRVI CCHHEEEHHHHCCCCEEEEEEHHHHCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHH AALPATDPLAFHAEIFCAPDGTLLLNEIASRTAGSLIIELIEQDYGFNLSRAWVRAQCGL HHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC DSGIGEVRRPARYSASLMFPTREAVLRALPLTLPFEWCTNVYVNGRQGVVNGRAASYTDD CCCHHHHCCCCCCCCEEECCCHHHHHHHCCCCCCHHHHCCEEECCCCCEECCCCCCHHHH VLSVIVSGESEAETSERVAQASAWLGERIEWQASH HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA