The gene/protein map for NC_012225 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238024021

Identifier: 238024021

GI number: 238024021

Start: 691817

End: 692524

Strand: Direct

Name: 238024021

Synonym: bglu_2g05750

Alternate gene names: NA

Gene position: 691817-692524 (Clockwise)

Preceding gene: 238024020

Following gene: 238024022

Centisome position: 24.47

GC content: 67.51

Gene sequence:

>708_bases
ATGAGTAACCGTCTGCTCGTCGTCGCGGCGCACCCGGGCGATTTCGTCTGGCGTGCCGCGGGCACCATGCTTCGCCATCG
CGCCGAGGGGCACGACGTGAAGGTCGTCTGCCTGTCGTTCGGCGTGATGGGCGAGGCCGGCAGGCTCTGGAAGGAAGCGC
ACGCCACGCACGCCACGGTCAAGCGCGCGCGCGAAGCCGAGGCGCGGCGGGCGGCCGAACTGCTCGACGTCGAACTCGAA
TGCTTCGATCTCGACGACTATCCGCTCGAGGTCACGCGCGAGAGCACGGTGCGGCTGAACCGGATCATCCGGCAATTCCG
TCCCGATGCCATCGTCACGCATCCCCCGGTCGATCCCGGCAACGTCGATCACGCCAACAGCTGCGAGATGGTGCAGCAGG
CTCGCGTGTTCGCGACCGCGCCGGGCCATGGGCCCGACATGGTGGCGCCGTCGAGCCTGTTTTATTTCGAACCCCATCAG
CCGGAGCTGTGCGACTTCCAGGCGAATCTGTTCGTCGACATCTCGAAGCTCTGGGAGCGCAAGCGCCAAGTGTTCGAGTG
CATTGCGTCGCAGCAGGGCGTATGGGCCTACTACGAGCGGGTCGCGCTGCAGCGCGGTGCGCAGGCGAGCCGTCGTGCGA
CGCAGACGATCACGCATGCGGAAGCGTTCCAGCGCGCCTTCCCGGCGGTGGCGCCGCTGCTGGCCTGA

Upstream 100 bases:

>100_bases
ATCGCGTCAGTCGATTCGTCCGTGCTGCGCAACCATGCTCCGCGACCCGTTACACGGCGGCTCGTCGACCGCTATTTCGA
TCTCGTCAGGGAGGATCACC

Downstream 100 bases:

>100_bases
CGGACTGGCGGGCCAGGGAGGCAACGGCAGATGATCCGGCATGGCACGCCCGCTAGGGCATTCACGGTCGATGGCGAGCA
CGGCAATGCCGCCTTCGTGT

Product: LmbE family protein

Products: NA

Alternate protein names: LmbE-Like Protein; N-Acetylglucosaminylphosphatidylinositol De-N-Acetylase; LmbE-Related Protein; GlcNAc-PI De-N-Acetylase

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATVKRAREAEARRAAELLDVELE
CFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPGNVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQ
PELCDFQANLFVDISKLWERKRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA

Sequences:

>Translated_235_residues
MSNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATVKRAREAEARRAAELLDVELE
CFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPGNVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQ
PELCDFQANLFVDISKLWERKRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA
>Mature_234_residues
SNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATVKRAREAEARRAAELLDVELEC
FDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPGNVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQP
ELCDFQANLFVDISKLWERKRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26413; Mature: 26282

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATV
CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
KRAREAEARRAAELLDVELECFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPG
HHHHHHHHHHHHHHHHCEEEEEECCCCCCEECHHHHHHHHHHHHHHCCCCEEECCCCCCC
NVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQPELCDFQANLFVDISKLWER
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHEEEHHHHHHH
KRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATV
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
KRAREAEARRAAELLDVELECFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPG
HHHHHHHHHHHHHHHHCEEEEEECCCCCCEECHHHHHHHHHHHHHHCCCCEEECCCCCCC
NVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQPELCDFQANLFVDISKLWER
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHEEEHHHHHHH
KRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA