| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024021
Identifier: 238024021
GI number: 238024021
Start: 691817
End: 692524
Strand: Direct
Name: 238024021
Synonym: bglu_2g05750
Alternate gene names: NA
Gene position: 691817-692524 (Clockwise)
Preceding gene: 238024020
Following gene: 238024022
Centisome position: 24.47
GC content: 67.51
Gene sequence:
>708_bases ATGAGTAACCGTCTGCTCGTCGTCGCGGCGCACCCGGGCGATTTCGTCTGGCGTGCCGCGGGCACCATGCTTCGCCATCG CGCCGAGGGGCACGACGTGAAGGTCGTCTGCCTGTCGTTCGGCGTGATGGGCGAGGCCGGCAGGCTCTGGAAGGAAGCGC ACGCCACGCACGCCACGGTCAAGCGCGCGCGCGAAGCCGAGGCGCGGCGGGCGGCCGAACTGCTCGACGTCGAACTCGAA TGCTTCGATCTCGACGACTATCCGCTCGAGGTCACGCGCGAGAGCACGGTGCGGCTGAACCGGATCATCCGGCAATTCCG TCCCGATGCCATCGTCACGCATCCCCCGGTCGATCCCGGCAACGTCGATCACGCCAACAGCTGCGAGATGGTGCAGCAGG CTCGCGTGTTCGCGACCGCGCCGGGCCATGGGCCCGACATGGTGGCGCCGTCGAGCCTGTTTTATTTCGAACCCCATCAG CCGGAGCTGTGCGACTTCCAGGCGAATCTGTTCGTCGACATCTCGAAGCTCTGGGAGCGCAAGCGCCAAGTGTTCGAGTG CATTGCGTCGCAGCAGGGCGTATGGGCCTACTACGAGCGGGTCGCGCTGCAGCGCGGTGCGCAGGCGAGCCGTCGTGCGA CGCAGACGATCACGCATGCGGAAGCGTTCCAGCGCGCCTTCCCGGCGGTGGCGCCGCTGCTGGCCTGA
Upstream 100 bases:
>100_bases ATCGCGTCAGTCGATTCGTCCGTGCTGCGCAACCATGCTCCGCGACCCGTTACACGGCGGCTCGTCGACCGCTATTTCGA TCTCGTCAGGGAGGATCACC
Downstream 100 bases:
>100_bases CGGACTGGCGGGCCAGGGAGGCAACGGCAGATGATCCGGCATGGCACGCCCGCTAGGGCATTCACGGTCGATGGCGAGCA CGGCAATGCCGCCTTCGTGT
Product: LmbE family protein
Products: NA
Alternate protein names: LmbE-Like Protein; N-Acetylglucosaminylphosphatidylinositol De-N-Acetylase; LmbE-Related Protein; GlcNAc-PI De-N-Acetylase
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATVKRAREAEARRAAELLDVELE CFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPGNVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQ PELCDFQANLFVDISKLWERKRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA
Sequences:
>Translated_235_residues MSNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATVKRAREAEARRAAELLDVELE CFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPGNVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQ PELCDFQANLFVDISKLWERKRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA >Mature_234_residues SNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATVKRAREAEARRAAELLDVELEC FDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPGNVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQP ELCDFQANLFVDISKLWERKRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA
Specific function: Unknown
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26413; Mature: 26282
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATV CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH KRAREAEARRAAELLDVELECFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPG HHHHHHHHHHHHHHHHCEEEEEECCCCCCEECHHHHHHHHHHHHHHCCCCEEECCCCCCC NVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQPELCDFQANLFVDISKLWER CCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHEEEHHHHHHH KRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNRLLVVAAHPGDFVWRAAGTMLRHRAEGHDVKVVCLSFGVMGEAGRLWKEAHATHATV CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH KRAREAEARRAAELLDVELECFDLDDYPLEVTRESTVRLNRIIRQFRPDAIVTHPPVDPG HHHHHHHHHHHHHHHHCEEEEEECCCCCCEECHHHHHHHHHHHHHHCCCCEEECCCCCCC NVDHANSCEMVQQARVFATAPGHGPDMVAPSSLFYFEPHQPELCDFQANLFVDISKLWER CCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHEEEHHHHHHH KRQVFECIASQQGVWAYYERVALQRGAQASRRATQTITHAEAFQRAFPAVAPLLA HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA