| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024012
Identifier: 238024012
GI number: 238024012
Start: 680193
End: 681575
Strand: Direct
Name: 238024012
Synonym: bglu_2g05660
Alternate gene names: NA
Gene position: 680193-681575 (Clockwise)
Preceding gene: 238024011
Following gene: 238024013
Centisome position: 24.06
GC content: 74.84
Gene sequence:
>1383_bases ATGTCCAAGATGATCATCACGGCGATCGGGTCGGCGGGCGACGTGTACCCGCTGCTCGGTATCGGCCGCGCGCTCGCGGC CCGCGGGCACCAGGTGGTGTTTTGCACGCATCCGCAATTCGAGGCGAGCGCGCGGCGCTGCGGCTTCGCGTTCGTGCCGA TCGGCACCGCGCAGGAGTACGCGCAGGCGATGGCGAACCCGGCGCTGTGGAATCCGCGCACCTCGCTGCGCACGCTCTGG AGCGTGATCGCGCCGTCGCTGCGCCCGCATTTCGAGCAGCTCTCGGCGCTGGTGGACGGCGACACGGTGCTGATCGGCAC GCTCTGGGCGTTCTCCGCGCGGCTGTTGCAGGAGCGCAACGGCACGCCCTACGTGTCGGTGCAGGTGTCGCCCTCCACGC TGCTCTCGGCGCACGCGCCGCCCACCCACAAGCGCCTGACCGTGCCGCGCCGGCTGCCGCTCGCGCTGAAGGCCGGGCTC ATCACGCTGATCGAGCGCGGCGTGCTCGACCGGATCTGCGGGCCGGCGCTCAACGCGCTGCGCGCGGAGCTCGGGCTCGC GCCGGCGCGCCGCATCCTCGGCCGCTGGCTGCACTCCACCGACGGCGTGCTGTGCCTGTTTCCCGACTGGTTCGCGGCGC CGCAGCCCGACTGGCCGGCCAATCATCGGCAGACCGGCTTTCCGCTGTTCAACGACATCGACGATCCGCTGCCGGACCCG GAACTCGAGGCGTTCCTCGCGGCGGGCGAGCCGCCGGTGGTGTTTACGGCCGGCTCGACGCGCGTGGACGGTGCCGGCTT CGCGCGTGCGACCGCCGAGGCGATGCGGGTGACCGGCACGCGCGGCATCCTGATCACGCCCGATGCCGCGCCGCACGATC CGGCCGAGCACCACGACGGCCGCGACATGCCGCGGCTGCTCACGCGCCGCTACCTGCCGCTGCGCCGGCTGCTGCCGCGC TGCCGCGCGCTGGTGCATCACGGCGGCATCGGCACGGCCTCGCTTGCCTACGAGGCCGGCATCGCGCAGGTGGTGATGCC GTCGGCGCACGACCAGTTCGACAACGCGCAGCGCGTGGCCGACAGCGGCTGCGGGGTGCGCCTGGACGCGCCGGTGGAGA GCGCGGCGCTCGCCGCGGCGCTCGGCTACGTGCTCCGCGACGAGGGTGTCGCGCTGCGCTGCGCGCAGCTCGCCGCCGCG CTGGCGGCCGCGCCCGACGGCTGCCTGGAGGCCGCGCGCTTCATCGAGCGCTTCGTTCCGGAGCCGGCCGCGCCGGCCGA GCGGATCGCGCCGGGCGGCGGCATCGACGGCGAACCTGCGCCGCGAGGCTGCCGCGGTGCCACCGGCCCCGGCCTGGCCG CACCGGAGGCGTCGGGCGCATGA
Upstream 100 bases:
>100_bases AGGCGGCGATGCCGGCGGCAAGGCATGCGCCGCGCGCGCCATCTGCGGATCGCGCGGCGCGCGGCGCCTATCTCTTTCGA GCCCATCAGAGGCGGTATCG
Downstream 100 bases:
>100_bases GTGTCTCCCCGCTGGCCGCTGCCGATAGCGCCCCGCCCGAAGCGGCCCTGCCCGATGCCACCGGCGCCATCGGCGGCGTG AGCGGCATGAACGCCGCGCT
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSKMIITAIGSAGDVYPLLGIGRALAARGHQVVFCTHPQFEASARRCGFAFVPIGTAQEYAQAMANPALWNPRTSLRTLW SVIAPSLRPHFEQLSALVDGDTVLIGTLWAFSARLLQERNGTPYVSVQVSPSTLLSAHAPPTHKRLTVPRRLPLALKAGL ITLIERGVLDRICGPALNALRAELGLAPARRILGRWLHSTDGVLCLFPDWFAAPQPDWPANHRQTGFPLFNDIDDPLPDP ELEAFLAAGEPPVVFTAGSTRVDGAGFARATAEAMRVTGTRGILITPDAAPHDPAEHHDGRDMPRLLTRRYLPLRRLLPR CRALVHHGGIGTASLAYEAGIAQVVMPSAHDQFDNAQRVADSGCGVRLDAPVESAALAAALGYVLRDEGVALRCAQLAAA LAAAPDGCLEAARFIERFVPEPAAPAERIAPGGGIDGEPAPRGCRGATGPGLAAPEASGA
Sequences:
>Translated_460_residues MSKMIITAIGSAGDVYPLLGIGRALAARGHQVVFCTHPQFEASARRCGFAFVPIGTAQEYAQAMANPALWNPRTSLRTLW SVIAPSLRPHFEQLSALVDGDTVLIGTLWAFSARLLQERNGTPYVSVQVSPSTLLSAHAPPTHKRLTVPRRLPLALKAGL ITLIERGVLDRICGPALNALRAELGLAPARRILGRWLHSTDGVLCLFPDWFAAPQPDWPANHRQTGFPLFNDIDDPLPDP ELEAFLAAGEPPVVFTAGSTRVDGAGFARATAEAMRVTGTRGILITPDAAPHDPAEHHDGRDMPRLLTRRYLPLRRLLPR CRALVHHGGIGTASLAYEAGIAQVVMPSAHDQFDNAQRVADSGCGVRLDAPVESAALAAALGYVLRDEGVALRCAQLAAA LAAAPDGCLEAARFIERFVPEPAAPAERIAPGGGIDGEPAPRGCRGATGPGLAAPEASGA >Mature_459_residues SKMIITAIGSAGDVYPLLGIGRALAARGHQVVFCTHPQFEASARRCGFAFVPIGTAQEYAQAMANPALWNPRTSLRTLWS VIAPSLRPHFEQLSALVDGDTVLIGTLWAFSARLLQERNGTPYVSVQVSPSTLLSAHAPPTHKRLTVPRRLPLALKAGLI TLIERGVLDRICGPALNALRAELGLAPARRILGRWLHSTDGVLCLFPDWFAAPQPDWPANHRQTGFPLFNDIDDPLPDPE LEAFLAAGEPPVVFTAGSTRVDGAGFARATAEAMRVTGTRGILITPDAAPHDPAEHHDGRDMPRLLTRRYLPLRRLLPRC RALVHHGGIGTASLAYEAGIAQVVMPSAHDQFDNAQRVADSGCGVRLDAPVESAALAAALGYVLRDEGVALRCAQLAAAL AAAPDGCLEAARFIERFVPEPAAPAERIAPGGGIDGEPAPRGCRGATGPGLAAPEASGA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 28 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 [H]
Pfam domain/function: PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 48691; Mature: 48560
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMIITAIGSAGDVYPLLGIGRALAARGHQVVFCTHPQFEASARRCGFAFVPIGTAQEY CCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCEEEEECCCHHHH AQAMANPALWNPRTSLRTLWSVIAPSLRPHFEQLSALVDGDTVLIGTLWAFSARLLQERN HHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCC GTPYVSVQVSPSTLLSAHAPPTHKRLTVPRRLPLALKAGLITLIERGVLDRICGPALNAL CCCEEEEEECHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAELGLAPARRILGRWLHSTDGVLCLFPDWFAAPQPDWPANHRQTGFPLFNDIDDPLPDP HHHHCCHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ELEAFLAAGEPPVVFTAGSTRVDGAGFARATAEAMRVTGTRGILITPDAAPHDPAEHHDG HHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC RDMPRLLTRRYLPLRRLLPRCRALVHHGGIGTASLAYEAGIAQVVMPSAHDQFDNAQRVA CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCHHHHHHHHHHH DSGCGVRLDAPVESAALAAALGYVLRDEGVALRCAQLAAALAAAPDGCLEAARFIERFVP HCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC EPAAPAERIAPGGGIDGEPAPRGCRGATGPGLAAPEASGA CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKMIITAIGSAGDVYPLLGIGRALAARGHQVVFCTHPQFEASARRCGFAFVPIGTAQEY CCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCEEEEECCCHHHH AQAMANPALWNPRTSLRTLWSVIAPSLRPHFEQLSALVDGDTVLIGTLWAFSARLLQERN HHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCC GTPYVSVQVSPSTLLSAHAPPTHKRLTVPRRLPLALKAGLITLIERGVLDRICGPALNAL CCCEEEEEECHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAELGLAPARRILGRWLHSTDGVLCLFPDWFAAPQPDWPANHRQTGFPLFNDIDDPLPDP HHHHCCHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ELEAFLAAGEPPVVFTAGSTRVDGAGFARATAEAMRVTGTRGILITPDAAPHDPAEHHDG HHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC RDMPRLLTRRYLPLRRLLPRCRALVHHGGIGTASLAYEAGIAQVVMPSAHDQFDNAQRVA CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCHHHHHHHHHHH DSGCGVRLDAPVESAALAAALGYVLRDEGVALRCAQLAAALAAAPDGCLEAARFIERFVP HCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC EPAAPAERIAPGGGIDGEPAPRGCRGATGPGLAAPEASGA CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]