Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238023972

Identifier: 238023972

GI number: 238023972

Start: 625187

End: 626614

Strand: Direct

Name: 238023972

Synonym: bglu_2g05220

Alternate gene names: NA

Gene position: 625187-626614 (Clockwise)

Preceding gene: 238023971

Following gene: 238023973

Centisome position: 22.11

GC content: 72.34

Gene sequence:

>1428_bases
ATGCCGCGAGCCGGACGCGCGCGATGGGCCGCGTGGCGCGTCGCGCTCGGCGCGGCGGCGCTCGTGCTGCTGCAAGGGGT
GTGCGCCGCCGCCGACACCGCGCCGGCCTGTACGGCGACGCGGCCGATTCCCTCGTTCAACCGCTGGCAGGAGCACTGGG
GGGCGCTGGCCGATCCGTGCCTGCCGCGCCGGCCGCTGGACGGCCTCAAGTACCTGCCGCTGGGCAGCGACCCGAGCTGG
TATCTGTCGCTCGGCGCGAACCTGCGCGAGCGCTTCGAGCTGAACCACACGCCCTTGTTCGGGCTCGGCGCCGCGCGGCC
CGACAGCTACCTGATCCAGCGCGCCGAGCTGCATCTCGACGCGCGTTTCGGCGAGCACCTGCAGGCGTTCGCGCAGGTGG
AGGACGCGCGCGCGTTCGGCAAGGACGCCGTGTCGCCCGTCGACCGCAATCCGCTCGATCTCGAGCAGGCGTTCGTCGCC
TATGTGCACCGGCTCGGCCCCGGCACCTTCAAGGCGCGCATCGGCCGGCAGGAGATGGCCTTCGACCTGCAGCGCTTCGT
CTCGGTGCGCGACGGCCCGAACGTGCGTCAGGCCTTCGACGCGATCTGGGCCGACTATGAAATCGGCCGATGGCGCTTCA
TCGGCTATGTCACGCGGCCGGTGCAGTATCGCGACCTGGACGCTTTCGACGACACCTCGAACCGTCACCTGACATTCAGC
GGCGTGCGCGTGGAGCGCAGCGGCGTCGGCCCCGGCGACCTGTCGGCCTACTGGTCGCGCTACGCGCGCGACGGCGCACG
CTTCGCCGACGCGAGCGGCACCGAGCTGCGCGACGTGTTCGACGCGCGCTACGCCGGCAGGCAGGCGCCGTTCGACTGGG
ACGTGGAGGCGATGGCGCAGACCGGCCACGTCGGTCGCGCCACGGTGGGCGCCTGGGCCTTCGGCGCGCTGGCCGGCTAC
ACCCTGGCCGCGCTGCCGGGCGCGCCGCGCCTGGGCCTGCAGCTGGACGGCGCCTCGGGCGACCGCCACCCCGGTGACGG
GCATGTCGGCACCTTCAATCCGCTGTTTCCGAACGGCTACTACTTCACGCTGGCCGGCTACGCGGGCTACAGCAACCTGA
TCCACCTGAAGCCGTCGGTGACCTTCCACGTCACTCCCCAGCTCACGCTGACGACGGCGCTGGGGCTGCAGTGGCGCGCG
ACGACGGCCGACGCGGTGTACGGGCAGGGCATGGCGGCGGTGCCGGGCACGGCCGGCAGCGGCAGCCGCTGGAGCGGCAT
GTACGGGCAGCTGCGCGCCGACTGGATCGTGGACGACCATCTCGCGCTCGCCTTCGAGGCGGTCCATTTCGAGGTCGGCG
ATTCGTTGCGCGCGCTCGGCGCGCGCAACGGCGACTACCTCGGCGTCGAGGCGAAATTCGGCTGGTGA

Upstream 100 bases:

>100_bases
ACGGCGATGGTCGCGTTCCCGGGCGGCTACGTGGCCGAGCTGCACCAGTTCGACGCCGCCGCGGCGAACTGAGCGCATGC
CGGCCGAGACGATGGGCGGT

Downstream 100 bases:

>100_bases
ACGCAGGCATCGACGGGGAGCCACATGGGTACGCAACAGCAGGGCACGCAACAGCAGCTTGAACTCGTCCGACTCGCCGC
GGCGGTGCGCGCGAACCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MPRAGRARWAAWRVALGAAALVLLQGVCAAADTAPACTATRPIPSFNRWQEHWGALADPCLPRRPLDGLKYLPLGSDPSW
YLSLGANLRERFELNHTPLFGLGAARPDSYLIQRAELHLDARFGEHLQAFAQVEDARAFGKDAVSPVDRNPLDLEQAFVA
YVHRLGPGTFKARIGRQEMAFDLQRFVSVRDGPNVRQAFDAIWADYEIGRWRFIGYVTRPVQYRDLDAFDDTSNRHLTFS
GVRVERSGVGPGDLSAYWSRYARDGARFADASGTELRDVFDARYAGRQAPFDWDVEAMAQTGHVGRATVGAWAFGALAGY
TLAALPGAPRLGLQLDGASGDRHPGDGHVGTFNPLFPNGYYFTLAGYAGYSNLIHLKPSVTFHVTPQLTLTTALGLQWRA
TTADAVYGQGMAAVPGTAGSGSRWSGMYGQLRADWIVDDHLALAFEAVHFEVGDSLRALGARNGDYLGVEAKFGW

Sequences:

>Translated_475_residues
MPRAGRARWAAWRVALGAAALVLLQGVCAAADTAPACTATRPIPSFNRWQEHWGALADPCLPRRPLDGLKYLPLGSDPSW
YLSLGANLRERFELNHTPLFGLGAARPDSYLIQRAELHLDARFGEHLQAFAQVEDARAFGKDAVSPVDRNPLDLEQAFVA
YVHRLGPGTFKARIGRQEMAFDLQRFVSVRDGPNVRQAFDAIWADYEIGRWRFIGYVTRPVQYRDLDAFDDTSNRHLTFS
GVRVERSGVGPGDLSAYWSRYARDGARFADASGTELRDVFDARYAGRQAPFDWDVEAMAQTGHVGRATVGAWAFGALAGY
TLAALPGAPRLGLQLDGASGDRHPGDGHVGTFNPLFPNGYYFTLAGYAGYSNLIHLKPSVTFHVTPQLTLTTALGLQWRA
TTADAVYGQGMAAVPGTAGSGSRWSGMYGQLRADWIVDDHLALAFEAVHFEVGDSLRALGARNGDYLGVEAKFGW
>Mature_474_residues
PRAGRARWAAWRVALGAAALVLLQGVCAAADTAPACTATRPIPSFNRWQEHWGALADPCLPRRPLDGLKYLPLGSDPSWY
LSLGANLRERFELNHTPLFGLGAARPDSYLIQRAELHLDARFGEHLQAFAQVEDARAFGKDAVSPVDRNPLDLEQAFVAY
VHRLGPGTFKARIGRQEMAFDLQRFVSVRDGPNVRQAFDAIWADYEIGRWRFIGYVTRPVQYRDLDAFDDTSNRHLTFSG
VRVERSGVGPGDLSAYWSRYARDGARFADASGTELRDVFDARYAGRQAPFDWDVEAMAQTGHVGRATVGAWAFGALAGYT
LAALPGAPRLGLQLDGASGDRHPGDGHVGTFNPLFPNGYYFTLAGYAGYSNLIHLKPSVTFHVTPQLTLTTALGLQWRAT
TADAVYGQGMAAVPGTAGSGSRWSGMYGQLRADWIVDDHLALAFEAVHFEVGDSLRALGARNGDYLGVEAKFGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51934; Mature: 51803

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAGRARWAAWRVALGAAALVLLQGVCAAADTAPACTATRPIPSFNRWQEHWGALADPC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
LPRRPLDGLKYLPLGSDPSWYLSLGANLRERFELNHTPLFGLGAARPDSYLIQRAELHLD
CCCCCCCCCEECCCCCCCCEEEEECCCHHHHHCCCCCCEEECCCCCCHHHHHHHHHHEEE
ARFGEHLQAFAQVEDARAFGKDAVSPVDRNPLDLEQAFVAYVHRLGPGTFKARIGRQEMA
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHH
FDLQRFVSVRDGPNVRQAFDAIWADYEIGRWRFIGYVTRPVQYRDLDAFDDTSNRHLTFS
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEE
GVRVERSGVGPGDLSAYWSRYARDGARFADASGTELRDVFDARYAGRQAPFDWDVEAMAQ
EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
TGHVGRATVGAWAFGALAGYTLAALPGAPRLGLQLDGASGDRHPGDGHVGTFNPLFPNGY
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE
YFTLAGYAGYSNLIHLKPSVTFHVTPQLTLTTALGLQWRATTADAVYGQGMAAVPGTAGS
EEEEEECCCCCCEEEECCCEEEEECCCEEEEEECCCEEECCCCHHHHCCCCEECCCCCCC
GSRWSGMYGQLRADWIVDDHLALAFEAVHFEVGDSLRALGARNGDYLGVEAKFGW
CCCCCCCCCCEEECEEECCHHHEEEEEEEECCCCHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure 
PRAGRARWAAWRVALGAAALVLLQGVCAAADTAPACTATRPIPSFNRWQEHWGALADPC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
LPRRPLDGLKYLPLGSDPSWYLSLGANLRERFELNHTPLFGLGAARPDSYLIQRAELHLD
CCCCCCCCCEECCCCCCCCEEEEECCCHHHHHCCCCCCEEECCCCCCHHHHHHHHHHEEE
ARFGEHLQAFAQVEDARAFGKDAVSPVDRNPLDLEQAFVAYVHRLGPGTFKARIGRQEMA
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHH
FDLQRFVSVRDGPNVRQAFDAIWADYEIGRWRFIGYVTRPVQYRDLDAFDDTSNRHLTFS
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEE
GVRVERSGVGPGDLSAYWSRYARDGARFADASGTELRDVFDARYAGRQAPFDWDVEAMAQ
EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
TGHVGRATVGAWAFGALAGYTLAALPGAPRLGLQLDGASGDRHPGDGHVGTFNPLFPNGY
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE
YFTLAGYAGYSNLIHLKPSVTFHVTPQLTLTTALGLQWRATTADAVYGQGMAAVPGTAGS
EEEEEECCCCCCEEEECCCEEEEECCCEEEEEECCCEEECCCCHHHHCCCCEECCCCCCC
GSRWSGMYGQLRADWIVDDHLALAFEAVHFEVGDSLRALGARNGDYLGVEAKFGW
CCCCCCCCCCEEECEEECCHHHEEEEEEEECCCCHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA