| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is soxG [H]
Identifier: 238023952
GI number: 238023952
Start: 602739
End: 603374
Strand: Direct
Name: soxG [H]
Synonym: bglu_2g05020
Alternate gene names: 238023952
Gene position: 602739-603374 (Clockwise)
Preceding gene: 238023951
Following gene: 238023953
Centisome position: 21.32
GC content: 69.97
Gene sequence:
>636_bases ATGTGGAATGAAACGAGAAATCAGCCTTCGGTGGCCGTGCAGGGCGCGGGACTGCGGCTCGAATCGCCGCTGGTGGGCGC GCAGGACGTGCTGAAGCCGCATCAGGGCCGCGCCTCGCAGAAGTTTCAGCTGCGCGAGCGGCCGTTCCTCGATCTCGTCA ACGTGCGCGGCGAGGCGGCCGATCCGGCCTTCGTCGCCGCGTTCGAGCAGGTGGTCGGCTGCCGGCCGCCCGTTAAGCCG AACACGGTGGCGCGCGGCGCCGAATACGACGTGCTGTGGCTCGGCCCCGACGAGTGGCTGGTGCGCTCGCATGGCCCGGT GGCGGCCGGGCAGCTCGAAGGCCGGCTCGTGCCGGCGCTGGCCGGGCTCTATGCGGCGGCGGTGGATGTCGGCAGCGGCT ACACCGTGCTCGAGATCAGCGGCGAGCGGGTGCGCGACGTGATCGCGCGCGGCTGCCCGCTCGACCTGCATCCACGCGGC TTCGGCGTGGGCCAATGCGCGCAGAGCCATTACTTCAAGGCTTCGCTGACGCTGGTGCCCACCGGCGAGCAATGCTACGA ACTGGTGATCCGCCGCAGCTTCGCCGACTATTTCGTGCGCATCATGCTCGACGCCGCGGCGCCGCTCCAGTCATGA
Upstream 100 bases:
>100_bases AAGATGGGGCAGCCGGTGGCGATCTCGCTCGCGAACGGCAAGCGCGTGGTCGCGAAGATCACGAGCCCGGTTTTCTACGA CACCGAAGGGGTACGTCAGA
Downstream 100 bases:
>100_bases AGCCCGTCGATGGTCCGTTCGCGCCGCTCGAGCCGCCGCGCGGGCGCGGCTGGAGCGTGTTCATCGACGCGCTGCAGGTG CCGGCGCGCATCGGCATCCA
Product: sarcosine oxidase subunit gamma
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAADPAFVAAFEQVVGCRPPVKP NTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPALAGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRG FGVGQCAQSHYFKASLTLVPTGEQCYELVIRRSFADYFVRIMLDAAAPLQS
Sequences:
>Translated_211_residues MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAADPAFVAAFEQVVGCRPPVKP NTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPALAGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRG FGVGQCAQSHYFKASLTLVPTGEQCYELVIRRSFADYFVRIMLDAAAPLQS >Mature_211_residues MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAADPAFVAAFEQVVGCRPPVKP NTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPALAGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRG FGVGQCAQSHYFKASLTLVPTGEQCYELVIRRSFADYFVRIMLDAAAPLQS
Specific function: Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate [H]
COG id: COG4583
COG function: function code E; Sarcosine oxidase gamma subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007375 - InterPro: IPR006280 [H]
Pfam domain/function: PF04268 SoxG [H]
EC number: =1.5.3.1 [H]
Molecular weight: Translated: 22891; Mature: 22891
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAA CCCCCCCCCCEEEECCCEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCCEEHHCCCCCC DPAFVAAFEQVVGCRPPVKPNTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPAL CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHEEECCCCEECCCCCCCHHHHH AGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRGFGVGQCAQSHYFKASLTLVP HHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEE TGEQCYELVIRRSFADYFVRIMLDAAAPLQS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAA CCCCCCCCCCEEEECCCEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCCEEHHCCCCCC DPAFVAAFEQVVGCRPPVKPNTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPAL CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHEEECCCCEECCCCCCCHHHHH AGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRGFGVGQCAQSHYFKASLTLVP HHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEE TGEQCYELVIRRSFADYFVRIMLDAAAPLQS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7543100 [H]