| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023931
Identifier: 238023931
GI number: 238023931
Start: 576775
End: 577725
Strand: Direct
Name: 238023931
Synonym: bglu_2g04800
Alternate gene names: NA
Gene position: 576775-577725 (Clockwise)
Preceding gene: 238023930
Following gene: 238023933
Centisome position: 20.4
GC content: 66.14
Gene sequence:
>951_bases ATGAAACGATTCCTGATCGCGGCGGCTTGCGGGCTCGGGCTGGCCGCGGCACCGTGGACGGCCGCGCGGGCGGCCGATCC GCAGGCCTGCAAGACGGTGCGCTTCGCCGACGTCGGCTGGAGCGATATCGCGGCCACCACCGGGCTCGCCTCGACGGTGC TGGCCGGGCTCGGCTACACGCCGACCAAGACCATCGCCTCGGTGCCGATCACGTTCGCGGGGATCAAGAGCAAGCAGATC GACGTGTTCCTCGGCTACTGGTCGCCGACCATGGACCCGATCATCGCGCCCTTCACGAAGGCCGGCACGATCAAGGTGCT CGCCACGCCGAACCTGACCGGCGCGAAATACACGCTGGCGGTGCCCGACTACGTCTACCAGGGCGGCCTGAAGTCGTTCT CCGACATTCAGAAGTACGCCGACAAGCTGGACGGCAAGATCTACGGCATCGAACCCGGCAACGACGGCAACGCGCTGATC CGCAAGATGATCGACGGCAACCAGTACGGGCTCGGCAAGTTCAAGCTGGTGGAATCGAGCGAGGCGGGCATGCTGGTGGA GGTGAACCGCGCGATCCGCAACAAGCAGTGGATCGTGTTCCTCGGCTGGGAGCCGCACCCGATGAACGTGCAGTTCAAGA TGGATTACCTAACGGGCGGCGACGCCGTGTTCGGCCCGAACTACGGCGAGGCGCGCGTGCTGACGGCCACGCCGCCCGAT TACGCGGCGCGCTGCCCGAACGCGGCGAAGTTCGTGTCGAACCTGCAGTTCACCACCGAGATCGAGAACCGCGTGATGGT GCCGATCATGAGCAAGGAAGATCCGAACAAGGCCGCGAGCGCCTGGCTGAAGGCCAATCCGCAGGTGCTCGACAAGTGGC TGGCCGGCGTCACGACGTTCGACGGCAAGCCGGGGCTGCCGGCCGTGAGGCGCTATCTGGGCCTGCCTTGA
Upstream 100 bases:
>100_bases ACGCACGCAGCCGGCCCGGGTAAAGCAGGGCGCTGACGCCGCGCCGCTTCGTACCGAACCCTGTCTCATATCGAACCCAC AGCTGAGAGGAGAGAAGCAC
Downstream 100 bases:
>100_bases GCGCGAGGCCTGGCCCGTCTCGCCCGGCGCGCGAGTCAGACCGGAATCGAGCCGCCGCGCAGCCGGATGCCGAGCCGGAT CAGTTGCACGATGCCGGCCG
Product: glycine betaine/L-proline ABC transporter periplasmic glycine betaine/L-proline-binding protein
Products: NA
Alternate protein names: Fragment [H]
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYTPTKTIASVPITFAGIKSKQI DVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLAVPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALI RKMIDGNQYGLGKFKLVESSEAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTFDGKPGLPAVRRYLGLP
Sequences:
>Translated_316_residues MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYTPTKTIASVPITFAGIKSKQI DVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLAVPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALI RKMIDGNQYGLGKFKLVESSEAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTFDGKPGLPAVRRYLGLP >Mature_316_residues MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYTPTKTIASVPITFAGIKSKQI DVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLAVPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALI RKMIDGNQYGLGKFKLVESSEAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTFDGKPGLPAVRRYLGLP
Specific function: Unknown
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 34075; Mature: 34075
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYT CCCEEEEEHHCCCCCCCCCCHHCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHCCCC PTKTIASVPITFAGIKSKQIDVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLA CCHHHHCCCEEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEE VPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALIRKMIDGNQYGLGKFKLVESS CCHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC EAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD CCCEEEEEHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCEEECCCCCCEEEEEECCCH YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTF HHHHCCCHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCEEEC DGKPGLPAVRRYLGLP CCCCCCHHHHHHHCCC >Mature Secondary Structure MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYT CCCEEEEEHHCCCCCCCCCCHHCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHCCCC PTKTIASVPITFAGIKSKQIDVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLA CCHHHHCCCEEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEE VPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALIRKMIDGNQYGLGKFKLVESS CCHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC EAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD CCCEEEEEHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCEEECCCCCCEEEEEECCCH YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTF HHHHCCCHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCEEEC DGKPGLPAVRRYLGLP CCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10708384 [H]