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The map label for this gene is insD1 [C]

Identifier: 238023923

GI number: 238023923

Start: 566625

End: 567470

Strand: Direct

Name: insD1 [C]

Synonym: bglu_2g04690

Alternate gene names: 238023923

Gene position: 566625-567470 (Clockwise)

Preceding gene: 238023922

Following gene: 238023924

Centisome position: 20.04

GC content: 62.88

Gene sequence:

>846_bases
TTGAAGACGGTCTGCGATGTCCTTGGTGTGTCGCGCTCGAATCTCACGGTCAAGTTGAATCGCACCGCCGAATGGGTCGA
CCGGCGCAAGACGCCCGCGCTGGACGACATGCCGCTCGTCAACGAACTGCAGGCGTTGGTTGGCGAGTTGCCCACCTACG
GCTACCGGCGCGTCTGGGCATTGCTCCGGCGAAGCCGGGACGCGCTGGGCCAGGCGCGTGTCAACGTCAAGCGGGTGTAC
CGCGTCATGCATCGCCACGGGCTGCTGCTCGAACGCCGACGTCACGCGGCGTCCACGCGTCGACACGAGGGCAAGGTTGC
CGTGGACAAAAGCAATGTGCGCTGGTGCTCGGATGGATTCGAATTCCGCTGCGACGACGGCGTGCCGTTGCGCGTGGTCT
TCGCGCTCGACTGTTGCGACCGGGAGGCCATGAGCTGGGCCGCGAGCACGGGCGGCTACACCGGCGACATGGTTCGCGAC
GTGATGCTTCAGGCCGTCGAAAACCGCTTCGCCGGCAAGCTGAAAGCGGACAATGAAATCGAATGGCTGAGCGACAACGG
CTCCTGCTACATTGCCGACGAGACGCAGACGTTCTCGAGAGAAATCGGTCTGACGCCGGTTACGACACCGGTCCGGAGTC
CGCAGAGCAACGGGATGGCCGAAAGCTTCGTGAAGACGATGAAGCGTGATTACGTGTCGTGGATGCCCAAGCCCGACGCG
AGGACGGCACTGCAGAATCTGGCCATCGCTTTCGACCACTACAACGAGTCGCATCCGCACAGCGCCTTGAAATACCACTC
GCCACGCGAGTTTCGCCAGCGAGCCAGTTCTCCAACTCAAGCGTGA

Upstream 100 bases:

>100_bases
GCAAGAAGACGATGGAAGTGGAAATTCTTCGTGAGGCCGTGGAGTACGGTCGAGCAAAAAAATTGATTGCGCGCTCACCC
TTGCTGCCGGGGGACGACCG

Downstream 100 bases:

>100_bases
CCGAGTGTCCGGTTATGCGGGGGCAAGTCCACCGATACGGAAGACGACAGCGAGCTTACGTTACTGTTGCTCGTGCTCAA
GCCACTCGACAGTGACGTGA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKTVCDVLGVSRSNLTVKLNRTAEWVDRRKTPALDDMPLVNELQALVGELPTYGYRRVWALLRRSRDALGQARVNVKRVY
RVMHRHGLLLERRRHAASTRRHEGKVAVDKSNVRWCSDGFEFRCDDGVPLRVVFALDCCDREAMSWAASTGGYTGDMVRD
VMLQAVENRFAGKLKADNEIEWLSDNGSCYIADETQTFSREIGLTPVTTPVRSPQSNGMAESFVKTMKRDYVSWMPKPDA
RTALQNLAIAFDHYNESHPHSALKYHSPREFRQRASSPTQA

Sequences:

>Translated_281_residues
MKTVCDVLGVSRSNLTVKLNRTAEWVDRRKTPALDDMPLVNELQALVGELPTYGYRRVWALLRRSRDALGQARVNVKRVY
RVMHRHGLLLERRRHAASTRRHEGKVAVDKSNVRWCSDGFEFRCDDGVPLRVVFALDCCDREAMSWAASTGGYTGDMVRD
VMLQAVENRFAGKLKADNEIEWLSDNGSCYIADETQTFSREIGLTPVTTPVRSPQSNGMAESFVKTMKRDYVSWMPKPDA
RTALQNLAIAFDHYNESHPHSALKYHSPREFRQRASSPTQA
>Mature_281_residues
MKTVCDVLGVSRSNLTVKLNRTAEWVDRRKTPALDDMPLVNELQALVGELPTYGYRRVWALLRRSRDALGQARVNVKRVY
RVMHRHGLLLERRRHAASTRRHEGKVAVDKSNVRWCSDGFEFRCDDGVPLRVVFALDCCDREAMSWAASTGGYTGDMVRD
VMLQAVENRFAGKLKADNEIEWLSDNGSCYIADETQTFSREIGLTPVTTPVRSPQSNGMAESFVKTMKRDYVSWMPKPDA
RTALQNLAIAFDHYNESHPHSALKYHSPREFRQRASSPTQA

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=276, Percent_Identity=58.695652173913, Blast_Score=325, Evalue=2e-90,
Organism=Escherichia coli, GI1789424, Length=276, Percent_Identity=58.695652173913, Blast_Score=325, Evalue=2e-90,
Organism=Escherichia coli, GI1789224, Length=276, Percent_Identity=58.695652173913, Blast_Score=325, Evalue=2e-90,
Organism=Escherichia coli, GI1788305, Length=276, Percent_Identity=58.695652173913, Blast_Score=325, Evalue=2e-90,
Organism=Escherichia coli, GI1787669, Length=276, Percent_Identity=58.695652173913, Blast_Score=325, Evalue=2e-90,
Organism=Escherichia coli, GI1786558, Length=276, Percent_Identity=58.695652173913, Blast_Score=325, Evalue=2e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 31990; Mature: 31990

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVCDVLGVSRSNLTVKLNRTAEWVDRRKTPALDDMPLVNELQALVGELPTYGYRRVWA
CCHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LLRRSRDALGQARVNVKRVYRVMHRHGLLLERRRHAASTRRHEGKVAVDKSNVRWCSDGF
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCC
EFRCDDGVPLRVVFALDCCDREAMSWAASTGGYTGDMVRDVMLQAVENRFAGKLKADNEI
CEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
EWLSDNGSCYIADETQTFSREIGLTPVTTPVRSPQSNGMAESFVKTMKRDYVSWMPKPDA
EEEECCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
RTALQNLAIAFDHYNESHPHSALKYHSPREFRQRASSPTQA
HHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKTVCDVLGVSRSNLTVKLNRTAEWVDRRKTPALDDMPLVNELQALVGELPTYGYRRVWA
CCHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LLRRSRDALGQARVNVKRVYRVMHRHGLLLERRRHAASTRRHEGKVAVDKSNVRWCSDGF
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCC
EFRCDDGVPLRVVFALDCCDREAMSWAASTGGYTGDMVRDVMLQAVENRFAGKLKADNEI
CEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
EWLSDNGSCYIADETQTFSREIGLTPVTTPVRSPQSNGMAESFVKTMKRDYVSWMPKPDA
EEEECCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
RTALQNLAIAFDHYNESHPHSALKYHSPREFRQRASSPTQA
HHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA