| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023919
Identifier: 238023919
GI number: 238023919
Start: 556665
End: 557810
Strand: Reverse
Name: 238023919
Synonym: bglu_2g04610
Alternate gene names: NA
Gene position: 557810-556665 (Counterclockwise)
Preceding gene: 238023920
Following gene: 238023918
Centisome position: 19.73
GC content: 63.44
Gene sequence:
>1146_bases GTGATCGATACTTCTCACGCCACGCCGAGCCACGGCGCTGACCGGCGCCTGACCGTCGGCATTTCGCTGTTCGCGAGGGA CGGCCAGGCGATCTGGGAGAACGGCATCCATCAAAACATCGCGTTCCTCGCGATGATGCTCAGGCGATCGGAACGCATCG CCCGCATCGTGTTCCTGAACGGCGGCGACGCGCGGCAGATCCCTGCCGGCCTCGATTTCACCGATCTGGACATCGCGCTG GTGAACCCGCGCGACGTCTCGCACGAGCTCGACGTGGTGATCGAAATGGGTGCGCAACTGCCGGTGGACTGGCTGCGCTA CATGAAGACGCTCGGCAAGAAGCTGATCATGTGCTTCGTCGGCAACGTCTACGCCGGCCTCTGCGAAACGCCGATCTTCA ACCAGCCCTCGGGCCACATCTTCAACGGCGGCCCCTATGACGAAGTCTGGATGCTGCCGAAGGACGACAAGACGGCCAAG CCGCTGCTGCGCACGCTGATGCGCGTGCCGGTCCATTCGATGCCGCACATCTGGTCGCCGCACTTCATCGACCGGCGCAT TGCGGCGCTCGCCGGCGAAGGCATCCGCTTCGGCTACCAGCCGGGCCGCGGCGCCTGGCGGCTGGCGATCCTCGAGCCGA ACATCTCGGTGGTCAAGAGCTGCTATTACCCGATGCTGGTGGCCGATGAATGCTACCGCGCGGAGCCGGCAGCGGTGCAG CACCTCTACGTCGTCAACACGATGCACATGAAGGAACATCGCACCTTCCTGCACTTCGCGAACAGCCTCGACCTGGTGCG CCACCACAAGGCCACCTTCGAACCGCGCCTGGAACTGCCGTCATTTCTCTCGCAACACGTGGACGCGGTGATTTCGCACC AGTGGGAGAATCCGCAAAACTATCTCTACTACGACGTGCTCTACGGCGGCTATCCGTTGATCCACAATTCGCCCATGCTC GGCGACGCCGGCTACTACTATCCGGAATTCGATTCGGCCACGGGCGGCCGTGTGTTGCTCGAAGCGTGGCGCGAACACGA TGCGAACCTGGCCGGCTACCGCGAGAAGGCCGACGCGATGCTGCGGCGCGTCTCGATCGATAATCCGGCGAATCTCGACG CCTACGTCGAACGCCTGTTGGCCTGA
Upstream 100 bases:
>100_bases TCGGCGCAAGCGCGCACGTGACAACCAACGGCATTCTGAAACTGGGCATCGGCGTCTCGGGCCAGAACAAGACGTATGGT GTCGGATATGGATACAGCTG
Downstream 100 bases:
>100_bases GCGATTTCAGCGGGAGAACCTGCATGTCCGATATTCCCGTCCGTGACGTCCAGAACGGCAGCAAGCGTCTCGTGGTGGGC GTCTCGCTGTACGTGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MIDTSHATPSHGADRRLTVGISLFARDGQAIWENGIHQNIAFLAMMLRRSERIARIVFLNGGDARQIPAGLDFTDLDIAL VNPRDVSHELDVVIEMGAQLPVDWLRYMKTLGKKLIMCFVGNVYAGLCETPIFNQPSGHIFNGGPYDEVWMLPKDDKTAK PLLRTLMRVPVHSMPHIWSPHFIDRRIAALAGEGIRFGYQPGRGAWRLAILEPNISVVKSCYYPMLVADECYRAEPAAVQ HLYVVNTMHMKEHRTFLHFANSLDLVRHHKATFEPRLELPSFLSQHVDAVISHQWENPQNYLYYDVLYGGYPLIHNSPML GDAGYYYPEFDSATGGRVLLEAWREHDANLAGYREKADAMLRRVSIDNPANLDAYVERLLA
Sequences:
>Translated_381_residues MIDTSHATPSHGADRRLTVGISLFARDGQAIWENGIHQNIAFLAMMLRRSERIARIVFLNGGDARQIPAGLDFTDLDIAL VNPRDVSHELDVVIEMGAQLPVDWLRYMKTLGKKLIMCFVGNVYAGLCETPIFNQPSGHIFNGGPYDEVWMLPKDDKTAK PLLRTLMRVPVHSMPHIWSPHFIDRRIAALAGEGIRFGYQPGRGAWRLAILEPNISVVKSCYYPMLVADECYRAEPAAVQ HLYVVNTMHMKEHRTFLHFANSLDLVRHHKATFEPRLELPSFLSQHVDAVISHQWENPQNYLYYDVLYGGYPLIHNSPML GDAGYYYPEFDSATGGRVLLEAWREHDANLAGYREKADAMLRRVSIDNPANLDAYVERLLA >Mature_381_residues MIDTSHATPSHGADRRLTVGISLFARDGQAIWENGIHQNIAFLAMMLRRSERIARIVFLNGGDARQIPAGLDFTDLDIAL VNPRDVSHELDVVIEMGAQLPVDWLRYMKTLGKKLIMCFVGNVYAGLCETPIFNQPSGHIFNGGPYDEVWMLPKDDKTAK PLLRTLMRVPVHSMPHIWSPHFIDRRIAALAGEGIRFGYQPGRGAWRLAILEPNISVVKSCYYPMLVADECYRAEPAAVQ HLYVVNTMHMKEHRTFLHFANSLDLVRHHKATFEPRLELPSFLSQHVDAVISHQWENPQNYLYYDVLYGGYPLIHNSPML GDAGYYYPEFDSATGGRVLLEAWREHDANLAGYREKADAMLRRVSIDNPANLDAYVERLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43251; Mature: 43251
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTSHATPSHGADRRLTVGISLFARDGQAIWENGIHQNIAFLAMMLRRSERIARIVFLN CCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEE GGDARQIPAGLDFTDLDIALVNPRDVSHELDVVIEMGAQLPVDWLRYMKTLGKKLIMCFV CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GNVYAGLCETPIFNQPSGHIFNGGPYDEVWMLPKDDKTAKPLLRTLMRVPVHSMPHIWSP HHHHHHHHCCCCCCCCCCCEECCCCCCCEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCC HFIDRRIAALAGEGIRFGYQPGRGAWRLAILEPNISVVKSCYYPMLVADECYRAEPAAVQ HHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCHHHHHHHHCCCEEHHHHHCCCCHHHH HLYVVNTMHMKEHRTFLHFANSLDLVRHHKATFEPRLELPSFLSQHVDAVISHQWENPQN EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC YLYYDVLYGGYPLIHNSPMLGDAGYYYPEFDSATGGRVLLEAWREHDANLAGYREKADAM EEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH LRRVSIDNPANLDAYVERLLA HHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure MIDTSHATPSHGADRRLTVGISLFARDGQAIWENGIHQNIAFLAMMLRRSERIARIVFLN CCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEE GGDARQIPAGLDFTDLDIALVNPRDVSHELDVVIEMGAQLPVDWLRYMKTLGKKLIMCFV CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GNVYAGLCETPIFNQPSGHIFNGGPYDEVWMLPKDDKTAKPLLRTLMRVPVHSMPHIWSP HHHHHHHHCCCCCCCCCCCEECCCCCCCEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCC HFIDRRIAALAGEGIRFGYQPGRGAWRLAILEPNISVVKSCYYPMLVADECYRAEPAAVQ HHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCHHHHHHHHCCCEEHHHHHCCCCHHHH HLYVVNTMHMKEHRTFLHFANSLDLVRHHKATFEPRLELPSFLSQHVDAVISHQWENPQN EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC YLYYDVLYGGYPLIHNSPMLGDAGYYYPEFDSATGGRVLLEAWREHDANLAGYREKADAM EEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH LRRVSIDNPANLDAYVERLLA HHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA