| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023914
Identifier: 238023914
GI number: 238023914
Start: 551087
End: 552229
Strand: Direct
Name: 238023914
Synonym: bglu_2g04560
Alternate gene names: NA
Gene position: 551087-552229 (Clockwise)
Preceding gene: 238023913
Following gene: 238023916
Centisome position: 19.49
GC content: 66.05
Gene sequence:
>1143_bases ATGACTGCCCCTGTCGATTTGAACGGTCTGCGTATCGGCATCACCATCGGCCTGCACGAGCCGAACGAAAGCCTCTGGAT CAACGGCATCAAGCAGAACGCGCTGTTCCTCGCGAAGCTGCTGATGAGCTCGCCGCGCGCCTACCGGGTAACGCTCGTCA ATACCACCGCCACGCCGCTCACCGACGCGCTGCCCTGGGACCGCCGCCGCTTCGACACGCGCCCGTTCGCCGAGGCCAAG GATTCGCTCGACGTGCTGATCGAGCTGGGCGGCCAGATCGACGGCGAGCAGACGGCCTATCTGAAGTCGCGCGGCGTGAA GATCGTCAGCTATTGCTGCGGCTTCGAGTACATCCACGCCACGCAGTCGATCCTGTTCGGCCGCAGGCTGTGGGACACGC TGTTCATCAACCGCGGCTACGACGAGATCTGGGCCATCCCGCAGATCGCGCCGTCCTCGCTGCCGTTCCTGCAGTCGCTG CGGCGCTGCCCGGGCCGCGTGGTGCCGTTCGTCTGGGACCCGATGTTCCTGACCGCGCGCGCGCAGGCGCTGCGCGAGAA CGGCGAGTACCGTCCCAACGGGCAGCCGGGCAGGCGGCTCACCGTGATGGAGCCGAACCACGATGTCGTGAAGTTCTGCG TCTATCCGATGCTGATCATCGACGAGGTGTTCCGCCGCGAGCCCGACACGATCGCGTTCGCGCACGTGACGAACGCGGAG CATCTCGCGCATCACAGCCGCGAGTTCGTGCTGCTGATGAACTACCTCGACATCGTGCGCGCCGGCAAGGCCAGCTTCGT CGGCCGCTACGACACGCCGGTGTTCCTGTCCGAGTTCACCGACGTGGTGGTCTCGCACCAGTGGGAGAACCCGCTCAACT ATTTCTATTTCGACGTCTGCTGGCAGGGCTATCCGCTGGTCCACAACGCGCATCTCGCCGCCGACCTCGGTTACTACTAC CCGGAGAACGACGTGCAGGCCGGCGCCGACCTGCTGGCGCGCGTGCTGCGCGAACACGACGCCGGCTGGGAGCAGTACAC CAGCCGGCAGCGCGAGCTGCTGCGCCGCTATACGTCGGAGAATCCGGCGCTGGTGGCCGACTACGATCTGCTGGTCGAAA ACCTGGTGCGCGGCGCCGGGTGA
Upstream 100 bases:
>100_bases GGTCGGGTAGACTGCGGCCGATGACTCATGCCCTCCGCGCGGCCGACCCTCGCTTCGGCGGCGCCCCGGTGTGCTTCCGG TTTCTCCTTGCCTGCCCACG
Downstream 100 bases:
>100_bases CGCAGGCCGACCGGCCGCCATGCCGGCCCGGGCTGCCGGGCCGGTGCCCGCAAGGCGCGGCGGTGAGGAACGCGCGAGGC GGGTGGATCACGGCATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTAPVDLNGLRIGITIGLHEPNESLWINGIKQNALFLAKLLMSSPRAYRVTLVNTTATPLTDALPWDRRRFDTRPFAEAK DSLDVLIELGGQIDGEQTAYLKSRGVKIVSYCCGFEYIHATQSILFGRRLWDTLFINRGYDEIWAIPQIAPSSLPFLQSL RRCPGRVVPFVWDPMFLTARAQALRENGEYRPNGQPGRRLTVMEPNHDVVKFCVYPMLIIDEVFRREPDTIAFAHVTNAE HLAHHSREFVLLMNYLDIVRAGKASFVGRYDTPVFLSEFTDVVVSHQWENPLNYFYFDVCWQGYPLVHNAHLAADLGYYY PENDVQAGADLLARVLREHDAGWEQYTSRQRELLRRYTSENPALVADYDLLVENLVRGAG
Sequences:
>Translated_380_residues MTAPVDLNGLRIGITIGLHEPNESLWINGIKQNALFLAKLLMSSPRAYRVTLVNTTATPLTDALPWDRRRFDTRPFAEAK DSLDVLIELGGQIDGEQTAYLKSRGVKIVSYCCGFEYIHATQSILFGRRLWDTLFINRGYDEIWAIPQIAPSSLPFLQSL RRCPGRVVPFVWDPMFLTARAQALRENGEYRPNGQPGRRLTVMEPNHDVVKFCVYPMLIIDEVFRREPDTIAFAHVTNAE HLAHHSREFVLLMNYLDIVRAGKASFVGRYDTPVFLSEFTDVVVSHQWENPLNYFYFDVCWQGYPLVHNAHLAADLGYYY PENDVQAGADLLARVLREHDAGWEQYTSRQRELLRRYTSENPALVADYDLLVENLVRGAG >Mature_379_residues TAPVDLNGLRIGITIGLHEPNESLWINGIKQNALFLAKLLMSSPRAYRVTLVNTTATPLTDALPWDRRRFDTRPFAEAKD SLDVLIELGGQIDGEQTAYLKSRGVKIVSYCCGFEYIHATQSILFGRRLWDTLFINRGYDEIWAIPQIAPSSLPFLQSLR RCPGRVVPFVWDPMFLTARAQALRENGEYRPNGQPGRRLTVMEPNHDVVKFCVYPMLIIDEVFRREPDTIAFAHVTNAEH LAHHSREFVLLMNYLDIVRAGKASFVGRYDTPVFLSEFTDVVVSHQWENPLNYFYFDVCWQGYPLVHNAHLAADLGYYYP ENDVQAGADLLARVLREHDAGWEQYTSRQRELLRRYTSENPALVADYDLLVENLVRGAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43482; Mature: 43351
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPVDLNGLRIGITIGLHEPNESLWINGIKQNALFLAKLLMSSPRAYRVTLVNTTATPL CCCCCCCCCEEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC TDALPWDRRRFDTRPFAEAKDSLDVLIELGGQIDGEQTAYLKSRGVKIVSYCCGFEYIHA CCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEHHHHCHHHHHH TQSILFGRRLWDTLFINRGYDEIWAIPQIAPSSLPFLQSLRRCPGRVVPFVWDPMFLTAR HHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCHHHHHHHHCCCCCCCEEECHHHHHHH AQALRENGEYRPNGQPGRRLTVMEPNHDVVKFCVYPMLIIDEVFRREPDTIAFAHVTNAE HHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHH HLAHHSREFVLLMNYLDIVRAGKASFVGRYDTPVFLSEFTDVVVSHQWENPLNYFYFDVC HHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEE WQGYPLVHNAHLAADLGYYYPENDVQAGADLLARVLREHDAGWEQYTSRQRELLRRYTSE CCCCCEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC NPALVADYDLLVENLVRGAG CCCEEEHHHHHHHHHHHCCC >Mature Secondary Structure TAPVDLNGLRIGITIGLHEPNESLWINGIKQNALFLAKLLMSSPRAYRVTLVNTTATPL CCCCCCCCEEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC TDALPWDRRRFDTRPFAEAKDSLDVLIELGGQIDGEQTAYLKSRGVKIVSYCCGFEYIHA CCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEHHHHCHHHHHH TQSILFGRRLWDTLFINRGYDEIWAIPQIAPSSLPFLQSLRRCPGRVVPFVWDPMFLTAR HHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCHHHHHHHHCCCCCCCEEECHHHHHHH AQALRENGEYRPNGQPGRRLTVMEPNHDVVKFCVYPMLIIDEVFRREPDTIAFAHVTNAE HHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHH HLAHHSREFVLLMNYLDIVRAGKASFVGRYDTPVFLSEFTDVVVSHQWENPLNYFYFDVC HHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEE WQGYPLVHNAHLAADLGYYYPENDVQAGADLLARVLREHDAGWEQYTSRQRELLRRYTSE CCCCCEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC NPALVADYDLLVENLVRGAG CCCEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA