Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is ytfT [H]

Identifier: 238023905

GI number: 238023905

Start: 537488

End: 538528

Strand: Reverse

Name: ytfT [H]

Synonym: bglu_2g04450

Alternate gene names: 238023905

Gene position: 538528-537488 (Counterclockwise)

Preceding gene: 238023906

Following gene: 238023904

Centisome position: 19.05

GC content: 69.07

Gene sequence:

>1041_bases
ATGAAACGCATTCTCGGGCGGCTCGACCACCCGCTCGTCTGGCCGGCGCTGACGCTGGCACTTCTGCTCGCCCTGGACGT
CGTCTATCGGCCCAGCTTCCTGGCGGTGACGATGCTCGACGGCCATCTGTTCGGCGCGCCGATCGACATCCTGAACCGCG
CGGCGCCGCTCGTCATCGTGTCGCTCGGCATGACGCTCGTGATCGCCACGCGCGGCATCGACATCTCGGTGGGCGCGATC
GTCGCCATCGCCGGCGCGACCGCGGCGGTGATCCTGCAGGCGGACCCGTCCCACCTCGCCCAGGCGCTCATCGCGGCGGC
CGGCGTGGGGCTGCTGGCAGGCTTCTGGAACGGCTTGCTGGTGGCCTTCGTCGGCATGCAGCCGATCATCGCCACGCTCA
TCCTGATGGTGGCCGGGCGGGGCGTGGCGCAACTGCTCACCGACGGCCAGATCATTCCGATCGGCGTCAGCGGCTATCTG
CGGCTCGGCGACGGCTATCTCGCGACGATCCCGTGTTCCGTCTGGATCGCGGCCGCCGTGGTGACGCTCTCGGCGCTGCT
CGTCAATCGCACGGCGCTCGGCCTCTTCATCCGCGCCATCGGCGTGAACCCGGTGGCGACGCGTCTGGTCGGCCTGCGAT
CCGGCATGATCGTGTTCAGCGTCTATGCGTTCTCGGGGCTCACGGCGGCCATCGCCGGCATCATCGCCAGCTCGAACGTG
CGCAGCGCGGACGGCAACAACGCCGGCCTGCTGCTCGAGCTCGACGCGATCCTGGCCGTGACGCTCGGCGGCACGTCGCT
GATGGGCGGCCGCTTCAGCATGGCAGGCACCGTGCTCGGCGCACTCACCATCCAGACCCTGACGTACACCACCTACTCGA
TCGGCGTGCCGCCCGAGGCGACGCTGGTCGTGAAGGCCGTGGTCGTGATCCTGGTCAGCGTGATCCAGTCCGACGCCGCG
CGAGGGCTGCTGATGCGGCCGATCCGAAAAGCGCTTCATGGCGCGCGCGCGCGCCTCATCAACGGTTCGACGACATCATG
A

Upstream 100 bases:

>100_bases
ATCGGATCGCGGTGCTGCGCGACCGGCACAAGGTGGCCGAGGTGACGGGCGAATCGCTGTCGGAGGACGAGGTCTATCGG
TTCATCGCAGGAGGCCAGTC

Downstream 100 bases:

>100_bases
AAACGTTGACTCGCTACCTGGGCGATCCCCGTACCCTGCCGATCGTCGTGACGATCGTGCTGTTCGCCGCGCTGTTCGGC
TTCGGCTCCGTGATGTACAC

Product: Monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKRILGRLDHPLVWPALTLALLLALDVVYRPSFLAVTMLDGHLFGAPIDILNRAAPLVIVSLGMTLVIATRGIDISVGAI
VAIAGATAAVILQADPSHLAQALIAAAGVGLLAGFWNGLLVAFVGMQPIIATLILMVAGRGVAQLLTDGQIIPIGVSGYL
RLGDGYLATIPCSVWIAAAVVTLSALLVNRTALGLFIRAIGVNPVATRLVGLRSGMIVFSVYAFSGLTAAIAGIIASSNV
RSADGNNAGLLLELDAILAVTLGGTSLMGGRFSMAGTVLGALTIQTLTYTTYSIGVPPEATLVVKAVVVILVSVIQSDAA
RGLLMRPIRKALHGARARLINGSTTS

Sequences:

>Translated_346_residues
MKRILGRLDHPLVWPALTLALLLALDVVYRPSFLAVTMLDGHLFGAPIDILNRAAPLVIVSLGMTLVIATRGIDISVGAI
VAIAGATAAVILQADPSHLAQALIAAAGVGLLAGFWNGLLVAFVGMQPIIATLILMVAGRGVAQLLTDGQIIPIGVSGYL
RLGDGYLATIPCSVWIAAAVVTLSALLVNRTALGLFIRAIGVNPVATRLVGLRSGMIVFSVYAFSGLTAAIAGIIASSNV
RSADGNNAGLLLELDAILAVTLGGTSLMGGRFSMAGTVLGALTIQTLTYTTYSIGVPPEATLVVKAVVVILVSVIQSDAA
RGLLMRPIRKALHGARARLINGSTTS
>Mature_346_residues
MKRILGRLDHPLVWPALTLALLLALDVVYRPSFLAVTMLDGHLFGAPIDILNRAAPLVIVSLGMTLVIATRGIDISVGAI
VAIAGATAAVILQADPSHLAQALIAAAGVGLLAGFWNGLLVAFVGMQPIIATLILMVAGRGVAQLLTDGQIIPIGVSGYL
RLGDGYLATIPCSVWIAAAVVTLSALLVNRTALGLFIRAIGVNPVATRLVGLRSGMIVFSVYAFSGLTAAIAGIIASSNV
RSADGNNAGLLLELDAILAVTLGGTSLMGGRFSMAGTVLGALTIQTLTYTTYSIGVPPEATLVVKAVVVILVSVIQSDAA
RGLLMRPIRKALHGARARLINGSTTS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=288, Percent_Identity=54.5138888888889, Blast_Score=237, Evalue=7e-64,
Organism=Escherichia coli, GI1790191, Length=304, Percent_Identity=36.1842105263158, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI145693152, Length=255, Percent_Identity=32.5490196078431, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788896, Length=272, Percent_Identity=31.25, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788471, Length=285, Percent_Identity=30.8771929824561, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787793, Length=285, Percent_Identity=32.6315789473684, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789992, Length=136, Percent_Identity=39.7058823529412, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790524, Length=240, Percent_Identity=28.75, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082395, Length=258, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35462; Mature: 35462

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILGRLDHPLVWPALTLALLLALDVVYRPSFLAVTMLDGHLFGAPIDILNRAAPLVIV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCHHHHHH
SLGMTLVIATRGIDISVGAIVAIAGATAAVILQADPSHLAQALIAAAGVGLLAGFWNGLL
HHCCEEEEEECCCEEEHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
VAFVGMQPIIATLILMVAGRGVAQLLTDGQIIPIGVSGYLRLGDGYLATIPCSVWIAAAV
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEECCCEEEEHHHHHHHHHHH
VTLSALLVNRTALGLFIRAIGVNPVATRLVGLRSGMIVFSVYAFSGLTAAIAGIIASSNV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
RSADGNNAGLLLELDAILAVTLGGTSLMGGRFSMAGTVLGALTIQTLTYTTYSIGVPPEA
CCCCCCCCEEEEEEHHEEEEEECCCEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCH
TLVVKAVVVILVSVIQSDAARGLLMRPIRKALHGARARLINGSTTS
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MKRILGRLDHPLVWPALTLALLLALDVVYRPSFLAVTMLDGHLFGAPIDILNRAAPLVIV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCHHHHHH
SLGMTLVIATRGIDISVGAIVAIAGATAAVILQADPSHLAQALIAAAGVGLLAGFWNGLL
HHCCEEEEEECCCEEEHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
VAFVGMQPIIATLILMVAGRGVAQLLTDGQIIPIGVSGYLRLGDGYLATIPCSVWIAAAV
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEECCCEEEEHHHHHHHHHHH
VTLSALLVNRTALGLFIRAIGVNPVATRLVGLRSGMIVFSVYAFSGLTAAIAGIIASSNV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
RSADGNNAGLLLELDAILAVTLGGTSLMGGRFSMAGTVLGALTIQTLTYTTYSIGVPPEA
CCCCCCCCEEEEEEHHEEEEEECCCEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCH
TLVVKAVVVILVSVIQSDAARGLLMRPIRKALHGARARLINGSTTS
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]