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The map label for this gene is yjfF [H]

Identifier: 238023904

GI number: 238023904

Start: 536409

End: 537491

Strand: Reverse

Name: yjfF [H]

Synonym: bglu_2g04440

Alternate gene names: 238023904

Gene position: 537491-536409 (Counterclockwise)

Preceding gene: 238023905

Following gene: 238023903

Centisome position: 19.01

GC content: 67.22

Gene sequence:

>1083_bases
ATGAAAACGTTGACTCGCTACCTGGGCGATCCCCGTACCCTGCCGATCGTCGTGACGATCGTGCTGTTCGCCGCGCTGTT
CGGCTTCGGCTCCGTGATGTACACGGGCTTCTTCTCCATGCAGGTGCTGACGGGCCTGCTGGTCGACAATGCCTTTCTGC
TGATCGTCGCGATCGGCATGACGTTCGTGATCCTGTCCGGCGGCATCGATCTGTCGGTCGGCGCGGTGGTGGCCTTGACC
ACGATCCTGTGCGCGGTGGGCGCCGAGTGGATGCATTGGCCGTTCTGGGTCATCGTGCCGCTCGTGCTCGCCTTCGGCGC
GCTGTACGGCGCGGCGATGGGCGCGCTGATCCACTACTGCCGGCTTCAGCCGTTCATCGTCACGCTTGCCGGGATGTTTC
TGGCGCGCGGCGTCTGCTTCCTGATCACGACGCAGTCGATCACGATCGACGAGCCGACGTTTCGCGCCATCGCGCGCCTG
AGCGTGCCGGTGGGCGGGGGAACGCTGAACGCCGGCGCGCTGATCGCCCTCGCCACGCTCGGGCTGGCGATTTACGTCGC
CCATTTCACGCGCTTCGGGCGCAACGTCTATGCCGTCGGCGGGAACGAGCGCTCCGCGCTGCTGATGGGCCTGCCGGTGG
CGCGCACGAAGGTCGGCGTCTATGCGATAAGCGGGCTGTGCTCGGCGCTCGGCGGCGTCGTGTTCACGCTCTACGTGCTG
TCGGGCTACGGGCTGCAGGCGCAGGGCATGGAACTGGACGCGATCGCGGCCACCGTGATCGGCGGTACGCTGCTGACGGG
CGGCGTCGGCTACGTGATCGGCTCGTTGTTCGGGGTCGGCATTCTCGGCACCATCCAGACGCTGATTATTTTCGACGGCA
CGCTCAGTTCGTGGTGGACCCGGATCGTGATCGGCGCCCTGCTCTGTATTTTCTGCCTGCTGCAGCGGATCATCGAGCGT
CATGCGCGGCGGCGGCAGTCGGGCGGCTCCGGAACGGACGCGAAAGCGGCCCGCCCGGCGACGCATCCGGCCCGCGGAGA
CGACGAGGGCAAGCAAACCGCCCTGGTCGGCACGGGGCCGTGA

Upstream 100 bases:

>100_bases
GCGTGATCCAGTCCGACGCCGCGCGAGGGCTGCTGATGCGGCCGATCCGAAAAGCGCTTCATGGCGCGCGCGCGCGCCTC
ATCAACGGTTCGACGACATC

Downstream 100 bases:

>100_bases
CCTTGTACGGCAGCGACACCGCCGGCGGACGCGGCGCGAGCCTGGCAGCCGACCCGGCCGGCTCGCGCAAGGCGGTGGCG
GCGGAGGGCGCAACGGCGGC

Product: inner membrane ABC transporter permease protein YjfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKTLTRYLGDPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGMTFVILSGGIDLSVGAVVALT
TILCAVGAEWMHWPFWVIVPLVLAFGALYGAAMGALIHYCRLQPFIVTLAGMFLARGVCFLITTQSITIDEPTFRAIARL
SVPVGGGTLNAGALIALATLGLAIYVAHFTRFGRNVYAVGGNERSALLMGLPVARTKVGVYAISGLCSALGGVVFTLYVL
SGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSLFGVGILGTIQTLIIFDGTLSSWWTRIVIGALLCIFCLLQRIIER
HARRRQSGGSGTDAKAARPATHPARGDDEGKQTALVGTGP

Sequences:

>Translated_360_residues
MKTLTRYLGDPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGMTFVILSGGIDLSVGAVVALT
TILCAVGAEWMHWPFWVIVPLVLAFGALYGAAMGALIHYCRLQPFIVTLAGMFLARGVCFLITTQSITIDEPTFRAIARL
SVPVGGGTLNAGALIALATLGLAIYVAHFTRFGRNVYAVGGNERSALLMGLPVARTKVGVYAISGLCSALGGVVFTLYVL
SGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSLFGVGILGTIQTLIIFDGTLSSWWTRIVIGALLCIFCLLQRIIER
HARRRQSGGSGTDAKAARPATHPARGDDEGKQTALVGTGP
>Mature_360_residues
MKTLTRYLGDPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGMTFVILSGGIDLSVGAVVALT
TILCAVGAEWMHWPFWVIVPLVLAFGALYGAAMGALIHYCRLQPFIVTLAGMFLARGVCFLITTQSITIDEPTFRAIARL
SVPVGGGTLNAGALIALATLGLAIYVAHFTRFGRNVYAVGGNERSALLMGLPVARTKVGVYAISGLCSALGGVVFTLYVL
SGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSLFGVGILGTIQTLIIFDGTLSSWWTRIVIGALLCIFCLLQRIIER
HARRRQSGGSGTDAKAARPATHPARGDDEGKQTALVGTGP

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=319, Percent_Identity=49.5297805642633, Blast_Score=269, Evalue=2e-73,
Organism=Escherichia coli, GI1789992, Length=348, Percent_Identity=31.0344827586207, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1790191, Length=296, Percent_Identity=37.1621621621622, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788896, Length=311, Percent_Identity=32.1543408360129, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI145693152, Length=310, Percent_Identity=31.2903225806452, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1790524, Length=297, Percent_Identity=30.976430976431, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787793, Length=315, Percent_Identity=27.3015873015873, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787794, Length=288, Percent_Identity=31.5972222222222, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788471, Length=219, Percent_Identity=30.1369863013699, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693214, Length=250, Percent_Identity=34, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37737; Mature: 37737

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLTRYLGDPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGM
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFVILSGGIDLSVGAVVALTTILCAVGAEWMHWPFWVIVPLVLAFGALYGAAMGALIHYC
HHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQPFIVTLAGMFLARGVCFLITTQSITIDEPTFRAIARLSVPVGGGTLNAGALIALATL
HHHHHHHHHHHHHHHCCEEEEEEECCEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GLAIYVAHFTRFGRNVYAVGGNERSALLMGLPVARTKVGVYAISGLCSALGGVVFTLYVL
HHHHHHHHHHHHCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSLFGVGILGTIQTLIIFDGTLSSWWT
HCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RIVIGALLCIFCLLQRIIERHARRRQSGGSGTDAKAARPATHPARGDDEGKQTALVGTGP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKTLTRYLGDPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGM
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFVILSGGIDLSVGAVVALTTILCAVGAEWMHWPFWVIVPLVLAFGALYGAAMGALIHYC
HHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQPFIVTLAGMFLARGVCFLITTQSITIDEPTFRAIARLSVPVGGGTLNAGALIALATL
HHHHHHHHHHHHHHHCCEEEEEEECCEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GLAIYVAHFTRFGRNVYAVGGNERSALLMGLPVARTKVGVYAISGLCSALGGVVFTLYVL
HHHHHHHHHHHHCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSLFGVGILGTIQTLIIFDGTLSSWWT
HCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RIVIGALLCIFCLLQRIIERHARRRQSGGSGTDAKAARPATHPARGDDEGKQTALVGTGP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]