| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is exuT [H]
Identifier: 238023886
GI number: 238023886
Start: 509861
End: 511168
Strand: Direct
Name: exuT [H]
Synonym: bglu_2g04250
Alternate gene names: 238023886
Gene position: 509861-511168 (Clockwise)
Preceding gene: 238023885
Following gene: 238023887
Centisome position: 18.03
GC content: 65.52
Gene sequence:
>1308_bases ATGAAGGAGAAGGACTTGAAAACCATAGCTGGCCTGCGCTGGTGGATCATTGCCCTCGTGTGCCTGGGGACCATCGTCAA CTACCTGTCGCGCAACGCGCTGGGGGTGCTCGCGCCGCAGCTCAAGACGCTCCTGAGCATGAGCACGCAGCAGTACTCCT ACGTGGTGGGGGCATTTCAGGTCGGCTACACGCTGATGCAGCCGGTATGCGGGCTCGTCATCGACATCATCGGACTGCGC GCGGGCTTTGCGATCTTCGCCATGCTGTGGTCGGCCGTCGGCTGCCTGCACGGCCTGGCGAGCGGCTGGGCATCGCTTGC CGCGCTGCGCGGGCTGATGGGGCTCACGGAGGCGGTGGCGATTCCCGCCGGGATGAAGGTGGTCGCCGAATGGTTCCCGA ACAAGGAACGCTCGGTGGCCGTGGGCTATTTCAACGCCGGCACCTCGCTCGGTTCGCTGCTCGCCCCGCCGCTGGTGATC TTCATCTCCTTGCGGTACGGATGGCAGGCCGCGTTTGCCGTCACTGGCGCGCTCGGCTTCGCGTGGGCGGCAATCTGGTA CGTCTTTTATCGTTCTCCTGACAATCACCGGAAGATATCGGCCAAGGAGTATGAAAAGATCGTGGCCGGAAAGGAGCCGA GCGGGTCCGCCGCCGGCGGCCGGCGCCGTGTGCGCGACGTGATCGCGACGCGACGCTTCTGGGCCATCGCGCAGGCGCGC TTCTTCGCCGAGCCGGCCTGGCAGACGTTCAGCTTCTGGATTCCGCTCTACCTGGCAACCGAGCGCCACATGGATTTGAA GCAAATCGCCATTTTTGCCTGGCTGCCGTTTCTCGCGGCCGATCTGGGCGGCCTGTTCGGCGGCTACCTGTCTCCGTTCC TGATCAAGTATCTGCGCATCCCGCTGATCTGGTCGCGCGTCGCCGGCGTCGTGCTCGGCGCGTTCATGATGATCGGCCCC GCCTGCATCGGATTCGTCGCTTCGCCTTACGAGGCCATCGCGCTCTTCTGCGTGGGCGGCTTCGCCCATCAGATGATCTC GGCCCTGGTCAACACGCTGTCGGCCGATGTTTTCGATTCCAGCGAAGTCGGCACGGCGAGCGGCTTCGCCGGCATGGCCG CGTGGATCGGCGGACTCGGTTTTTCGCTGCTGGTGGGCGCGCTTGCCGATTCCATCGGCTACAAGCCGCTGTTCGTGGCA CTCGGCGCGTTCGATCTGATCGGCGCGACGCTCCTGATCATCCTGATGCGCGGCGTGACTCGCCCGCGCCCGGACGCGGC GACGCGCGGCACGCGCCCCGCCGCTTAA
Upstream 100 bases:
>100_bases GGGCATTTCCAAGTGGTACGATGACTGCCGTGATGGTTCGAATGCGTACCGAATCGAACATAACTCGAAAATTCCGACCG ATGCGATCGGGTCTGGAGAC
Downstream 100 bases:
>100_bases CGTCGATCAACCTCAGTCAAAGGCTGGACATGGCATCACTCAACAACCGTCCCCGCTTCGCGCTTGCCACCCGGTCGGGC GCGCATCTGGTGCTGGGCGC
Product: major facilitator superfamily protein
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKEKDLKTIAGLRWWIIALVCLGTIVNYLSRNALGVLAPQLKTLLSMSTQQYSYVVGAFQVGYTLMQPVCGLVIDIIGLR AGFAIFAMLWSAVGCLHGLASGWASLAALRGLMGLTEAVAIPAGMKVVAEWFPNKERSVAVGYFNAGTSLGSLLAPPLVI FISLRYGWQAAFAVTGALGFAWAAIWYVFYRSPDNHRKISAKEYEKIVAGKEPSGSAAGGRRRVRDVIATRRFWAIAQAR FFAEPAWQTFSFWIPLYLATERHMDLKQIAIFAWLPFLAADLGGLFGGYLSPFLIKYLRIPLIWSRVAGVVLGAFMMIGP ACIGFVASPYEAIALFCVGGFAHQMISALVNTLSADVFDSSEVGTASGFAGMAAWIGGLGFSLLVGALADSIGYKPLFVA LGAFDLIGATLLIILMRGVTRPRPDAATRGTRPAA
Sequences:
>Translated_435_residues MKEKDLKTIAGLRWWIIALVCLGTIVNYLSRNALGVLAPQLKTLLSMSTQQYSYVVGAFQVGYTLMQPVCGLVIDIIGLR AGFAIFAMLWSAVGCLHGLASGWASLAALRGLMGLTEAVAIPAGMKVVAEWFPNKERSVAVGYFNAGTSLGSLLAPPLVI FISLRYGWQAAFAVTGALGFAWAAIWYVFYRSPDNHRKISAKEYEKIVAGKEPSGSAAGGRRRVRDVIATRRFWAIAQAR FFAEPAWQTFSFWIPLYLATERHMDLKQIAIFAWLPFLAADLGGLFGGYLSPFLIKYLRIPLIWSRVAGVVLGAFMMIGP ACIGFVASPYEAIALFCVGGFAHQMISALVNTLSADVFDSSEVGTASGFAGMAAWIGGLGFSLLVGALADSIGYKPLFVA LGAFDLIGATLLIILMRGVTRPRPDAATRGTRPAA >Mature_435_residues MKEKDLKTIAGLRWWIIALVCLGTIVNYLSRNALGVLAPQLKTLLSMSTQQYSYVVGAFQVGYTLMQPVCGLVIDIIGLR AGFAIFAMLWSAVGCLHGLASGWASLAALRGLMGLTEAVAIPAGMKVVAEWFPNKERSVAVGYFNAGTSLGSLLAPPLVI FISLRYGWQAAFAVTGALGFAWAAIWYVFYRSPDNHRKISAKEYEKIVAGKEPSGSAAGGRRRVRDVIATRRFWAIAQAR FFAEPAWQTFSFWIPLYLATERHMDLKQIAIFAWLPFLAADLGGLFGGYLSPFLIKYLRIPLIWSRVAGVVLGAFMMIGP ACIGFVASPYEAIALFCVGGFAHQMISALVNTLSADVFDSSEVGTASGFAGMAAWIGGLGFSLLVGALADSIGYKPLFVA LGAFDLIGATLLIILMRGVTRPRPDAATRGTRPAA
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI148743791, Length=319, Percent_Identity=25.0783699059561, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI6912666, Length=385, Percent_Identity=25.1948051948052, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI154800443, Length=337, Percent_Identity=24.0356083086053, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI148728191, Length=295, Percent_Identity=25.7627118644068, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4885441, Length=203, Percent_Identity=27.0935960591133, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI5031955, Length=199, Percent_Identity=25.6281407035176, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI2367193, Length=431, Percent_Identity=46.4037122969838, Blast_Score=401, Evalue=1e-113, Organism=Escherichia coli, GI87082320, Length=417, Percent_Identity=27.3381294964029, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1789515, Length=331, Percent_Identity=28.7009063444109, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI2367379, Length=433, Percent_Identity=27.9445727482679, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1789152, Length=429, Percent_Identity=24.009324009324, Blast_Score=116, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17560030, Length=288, Percent_Identity=24.3055555555556, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17554148, Length=245, Percent_Identity=27.7551020408163, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17536337, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI20129235, Length=404, Percent_Identity=26.980198019802, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI28573708, Length=219, Percent_Identity=29.2237442922374, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573707, Length=219, Percent_Identity=29.2237442922374, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573299, Length=431, Percent_Identity=22.969837587007, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI20130135, Length=415, Percent_Identity=23.855421686747, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24655271, Length=415, Percent_Identity=23.855421686747, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24641682, Length=289, Percent_Identity=25.2595155709343, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24648416, Length=266, Percent_Identity=26.6917293233083, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21356189, Length=266, Percent_Identity=26.6917293233083, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550460, Length=270, Percent_Identity=25.5555555555556, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19920686, Length=294, Percent_Identity=25.8503401360544, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24655255, Length=358, Percent_Identity=25.1396648044693, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24580790, Length=309, Percent_Identity=25.8899676375405, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI45550364, Length=298, Percent_Identity=23.1543624161074, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24658674, Length=249, Percent_Identity=28.1124497991968, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24658658, Length=470, Percent_Identity=22.7659574468085, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922400, Length=262, Percent_Identity=24.4274809160305, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24639764, Length=251, Percent_Identity=23.9043824701195, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24654215, Length=262, Percent_Identity=24.4274809160305, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46787; Mature: 46787
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKDLKTIAGLRWWIIALVCLGTIVNYLSRNALGVLAPQLKTLLSMSTQQYSYVVGAFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYTLMQPVCGLVIDIIGLRAGFAIFAMLWSAVGCLHGLASGWASLAALRGLMGLTEAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPAGMKVVAEWFPNKERSVAVGYFNAGTSLGSLLAPPLVIFISLRYGWQAAFAVTGALGF CCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AWAAIWYVFYRSPDNHRKISAKEYEKIVAGKEPSGSAAGGRRRVRDVIATRRFWAIAQAR HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FFAEPAWQTFSFWIPLYLATERHMDLKQIAIFAWLPFLAADLGGLFGGYLSPFLIKYLRI HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIWSRVAGVVLGAFMMIGPACIGFVASPYEAIALFCVGGFAHQMISALVNTLSADVFDS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SEVGTASGFAGMAAWIGGLGFSLLVGALADSIGYKPLFVALGAFDLIGATLLIILMRGVT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RPRPDAATRGTRPAA CCCCCCCCCCCCCCC >Mature Secondary Structure MKEKDLKTIAGLRWWIIALVCLGTIVNYLSRNALGVLAPQLKTLLSMSTQQYSYVVGAFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYTLMQPVCGLVIDIIGLRAGFAIFAMLWSAVGCLHGLASGWASLAALRGLMGLTEAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPAGMKVVAEWFPNKERSVAVGYFNAGTSLGSLLAPPLVIFISLRYGWQAAFAVTGALGF CCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AWAAIWYVFYRSPDNHRKISAKEYEKIVAGKEPSGSAAGGRRRVRDVIATRRFWAIAQAR HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FFAEPAWQTFSFWIPLYLATERHMDLKQIAIFAWLPFLAADLGGLFGGYLSPFLIKYLRI HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIWSRVAGVVLGAFMMIGPACIGFVASPYEAIALFCVGGFAHQMISALVNTLSADVFDS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SEVGTASGFAGMAAWIGGLGFSLLVGALADSIGYKPLFVALGAFDLIGATLLIILMRGVT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RPRPDAATRGTRPAA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]