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The map label for this gene is glpR [H]

Identifier: 238023882

GI number: 238023882

Start: 503887

End: 504648

Strand: Direct

Name: glpR [H]

Synonym: bglu_2g04210

Alternate gene names: 238023882

Gene position: 503887-504648 (Clockwise)

Preceding gene: 238023876

Following gene: 238023883

Centisome position: 17.82

GC content: 71.52

Gene sequence:

>762_bases
ATGCTCGCAGAACAACGCCACCAGTACATCCTGTCTGAACTGTCCCGCTCGGGCGCGCTGTCGGTCGCCGAACTGGTGCG
CACGCTCGGCGTGTCGCGCGAAACCGTCCGGCGCGACCTGAACGCGCTCGCCACGCGCGGGCTGGTCGTCACCACCCACG
GCGGCGCGCTGGCCGCCGATCGCCGCGAGCCGAGCCTGTCCGAGCGCGAGGCCGCCAACGCCGACGCCAAGCAGTCGATC
GGCCGGCGCGCGGCCGACCTGGTGCCCGACGGCGCGTCGCTGCTGCTCGATTCGGGCAGCACGACCCATGCCGTCGCGTT
GGCGCTGACGGATCGCCACCGTCTGACCGTCTACACCAACGACTGGCGCATCGCGTTCGCGCTCGCGCGCCGCAACGAGA
ACCGCGTGACGCTGCTGGGCGGCGAGCTGTCCGACGACGAGGATGCCACGTTCGGCCTCGACACGATCCAGCAGCTGGCC
CAATACCACGTCGATTTCGCGTTCGTGGGCGCCGGCGGCGTGACGCAGGACGGCGACCTGACCGACTACACGCGGATCGC
CGCCGAGGTGCGCAGCCGGATGCTGGCGTCGGCCGCGACGGCGGTGGTGGTGGCCGACCACTCGAAGTTCGGCCGCGTCA
CGCCGGTGCGCATCAACGGCATCGAGCACACGCGCTACCTCGTCACCGACCGCATGCCCGAGAAGACCGTGCGCCGCGCC
GTGGCCTCGCGCGGGATCGAGCTGATCGTCTGCGAGGCCTGA

Upstream 100 bases:

>100_bases
CGGGCAGGGCGGCGCCGGCCCTTGCCGAATGCTCGCGGCGCTGTCAAGTCGCCGTACTACAATAGGCCGCCCGTGCCTTC
GACGCACTTCGGATCGCTTC

Downstream 100 bases:

>100_bases
GCCGCCCGGGCCGGACAGGCGGCCGGCGCGCGCCCGGCGGCGGGCAGGCAGGCGGGCAGGCAGGCGGGCAGGCAGGCGGG
CAGGCAGGCGGGCAGGCAGG

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLAEQRHQYILSELSRSGALSVAELVRTLGVSRETVRRDLNALATRGLVVTTHGGALAADRREPSLSEREAANADAKQSI
GRRAADLVPDGASLLLDSGSTTHAVALALTDRHRLTVYTNDWRIAFALARRNENRVTLLGGELSDDEDATFGLDTIQQLA
QYHVDFAFVGAGGVTQDGDLTDYTRIAAEVRSRMLASAATAVVVADHSKFGRVTPVRINGIEHTRYLVTDRMPEKTVRRA
VASRGIELIVCEA

Sequences:

>Translated_253_residues
MLAEQRHQYILSELSRSGALSVAELVRTLGVSRETVRRDLNALATRGLVVTTHGGALAADRREPSLSEREAANADAKQSI
GRRAADLVPDGASLLLDSGSTTHAVALALTDRHRLTVYTNDWRIAFALARRNENRVTLLGGELSDDEDATFGLDTIQQLA
QYHVDFAFVGAGGVTQDGDLTDYTRIAAEVRSRMLASAATAVVVADHSKFGRVTPVRINGIEHTRYLVTDRMPEKTVRRA
VASRGIELIVCEA
>Mature_253_residues
MLAEQRHQYILSELSRSGALSVAELVRTLGVSRETVRRDLNALATRGLVVTTHGGALAADRREPSLSEREAANADAKQSI
GRRAADLVPDGASLLLDSGSTTHAVALALTDRHRLTVYTNDWRIAFALARRNENRVTLLGGELSDDEDATFGLDTIQQLA
QYHVDFAFVGAGGVTQDGDLTDYTRIAAEVRSRMLASAATAVVVADHSKFGRVTPVRINGIEHTRYLVTDRMPEKTVRRA
VASRGIELIVCEA

Specific function: Repressor of the glycerol-3-phosphate regulon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=252, Percent_Identity=32.1428571428571, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI87082344, Length=248, Percent_Identity=29.4354838709677, Blast_Score=123, Evalue=9e-30,
Organism=Escherichia coli, GI1789059, Length=252, Percent_Identity=28.968253968254, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789519, Length=251, Percent_Identity=28.2868525896414, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788069, Length=236, Percent_Identity=29.6610169491525, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI226510968, Length=253, Percent_Identity=30.8300395256917, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1787063, Length=249, Percent_Identity=29.3172690763052, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789170, Length=229, Percent_Identity=29.2576419213974, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787540, Length=226, Percent_Identity=29.646017699115, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1790635, Length=252, Percent_Identity=25, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1790753, Length=239, Percent_Identity=24.2677824267782, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 27447; Mature: 27447

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEQRHQYILSELSRSGALSVAELVRTLGVSRETVRRDLNALATRGLVVTTHGGALAAD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCEEECC
RREPSLSEREAANADAKQSIGRRAADLVPDGASLLLDSGSTTHAVALALTDRHRLTVYTN
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEEEEECCCEEEEEEC
DWRIAFALARRNENRVTLLGGELSDDEDATFGLDTIQQLAQYHVDFAFVGAGGVTQDGDL
CEEEEEEEEECCCCEEEEECCCCCCCCCCEECHHHHHHHHHHCCCEEEEECCCCCCCCCC
TDYTRIAAEVRSRMLASAATAVVVADHSKFGRVTPVRINGIEHTRYLVTDRMPEKTVRRA
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHH
VASRGIELIVCEA
HHHCCCEEEEECC
>Mature Secondary Structure
MLAEQRHQYILSELSRSGALSVAELVRTLGVSRETVRRDLNALATRGLVVTTHGGALAAD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCEEECC
RREPSLSEREAANADAKQSIGRRAADLVPDGASLLLDSGSTTHAVALALTDRHRLTVYTN
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEEEEECCCEEEEEEC
DWRIAFALARRNENRVTLLGGELSDDEDATFGLDTIQQLAQYHVDFAFVGAGGVTQDGDL
CEEEEEEEEECCCCEEEEECCCCCCCCCCEECHHHHHHHHHHCCCEEEEECCCCCCCCCC
TDYTRIAAEVRSRMLASAATAVVVADHSKFGRVTPVRINGIEHTRYLVTDRMPEKTVRRA
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHH
VASRGIELIVCEA
HHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8955387; 3045764; 9278503 [H]