| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023880
Identifier: 238023880
GI number: 238023880
Start: 502501
End: 503364
Strand: Reverse
Name: 238023880
Synonym: bglu_2g04190
Alternate gene names: NA
Gene position: 503364-502501 (Counterclockwise)
Preceding gene: 238023881
Following gene: 238023879
Centisome position: 17.8
GC content: 77.31
Gene sequence:
>864_bases ATGCCCGCCCTGCTCGCCGCCGCCGCGTTCGTCGCGCTCTGGTCCACCGGCTTCGTGGTCGCCCGCGCGATCCCCCCCTA CGCCGATCCCAATCTCTACCTGCTGGCCCGCTTCGGCGGCACCGCGCTGCTGTTCGGCGCGATCGCACTGGCCACGCGCG CGCGCTGGCCGGCCGGCCGCGAGTGGGGCCGCCATCTGCTGGCGGGCGCGCTGCTGCAGGGCTGCTATCTCGGCGCGAGC TACTGGGCCGTCGCGCAGGGCCTGCCGGCCGGCGTGATGGCGCTGCTGGGCGCGCTGCAGCCGCTCGCCACCGCCGCGCT GGCGGTGCCGCTGTTCGGCGAGCGGCTGCCCGCGCGCGGCTGGGCCGGCATGGCGCTCGGCCTGGCCGGCGTCGCGCTGG TGCTCGCGCCGAAGCTGGCCGCGCCGGCGGCGGCGGCGGGGCTGTCGGCCTTCACGGTGCTCGTCGCGCTGCTGGCGATC GCCTCGATCACGGCCGGCTCGCTCTACCAGAAAACCGCCGTCGCGAGGACCGACCTGCGCACCACCGTGGCCGTGCAGAA TGCCGGCGCCGCGGCGGTGGCGGCCGGCTTCGCGCTCGCGCTCGGCGAGACGCGCTGGATCGCCTCGCCCACGCTGTGGT TCTCGCTGGCCTGGGGCGTGACGATGCTCTCGGGCGGCGCGATCGTGCTGCTGGTCTGGCTGCTGCGCCGCGGCGGCGCC GCGCGCGCCACCTCGTTGATGTTCCTCGCGCCGCCGCTGGCCGCGCTGCAGGGCTACCTGCTGTTCGGCGAGACGCTCGG CGCGCCGCAACTGGCCGGCTTCGCGCTGGCGCTGGCCGGGGTCGTGCTGGCGCGGGCGCGCTGA
Upstream 100 bases:
>100_bases TGCACCGGCGCCGGCGAGTGCAGGTTTTGACAAGACGCGCGGCCACGCCGCCCCGATACTGCGCGCATTGCCGTTTCGCC GCCGTCGCGGCCTGTCCCGC
Downstream 100 bases:
>100_bases GCCGCGCGTTTGCGCTTATGATGCCCGATCTGACCTGACCCGTTCCGGAGCAACCCGAGATGACCCGTCCCGACTACGCC GCGCGGCAACGCGCGATCGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPALLAAAAFVALWSTGFVVARAIPPYADPNLYLLARFGGTALLFGAIALATRARWPAGREWGRHLLAGALLQGCYLGAS YWAVAQGLPAGVMALLGALQPLATAALAVPLFGERLPARGWAGMALGLAGVALVLAPKLAAPAAAAGLSAFTVLVALLAI ASITAGSLYQKTAVARTDLRTTVAVQNAGAAAVAAGFALALGETRWIASPTLWFSLAWGVTMLSGGAIVLLVWLLRRGGA ARATSLMFLAPPLAALQGYLLFGETLGAPQLAGFALALAGVVLARAR
Sequences:
>Translated_287_residues MPALLAAAAFVALWSTGFVVARAIPPYADPNLYLLARFGGTALLFGAIALATRARWPAGREWGRHLLAGALLQGCYLGAS YWAVAQGLPAGVMALLGALQPLATAALAVPLFGERLPARGWAGMALGLAGVALVLAPKLAAPAAAAGLSAFTVLVALLAI ASITAGSLYQKTAVARTDLRTTVAVQNAGAAAVAAGFALALGETRWIASPTLWFSLAWGVTMLSGGAIVLLVWLLRRGGA ARATSLMFLAPPLAALQGYLLFGETLGAPQLAGFALALAGVVLARAR >Mature_286_residues PALLAAAAFVALWSTGFVVARAIPPYADPNLYLLARFGGTALLFGAIALATRARWPAGREWGRHLLAGALLQGCYLGASY WAVAQGLPAGVMALLGALQPLATAALAVPLFGERLPARGWAGMALGLAGVALVLAPKLAAPAAAAGLSAFTVLVALLAIA SITAGSLYQKTAVARTDLRTTVAVQNAGAAAVAAGFALALGETRWIASPTLWFSLAWGVTMLSGGAIVLLVWLLRRGGAA RATSLMFLAPPLAALQGYLLFGETLGAPQLAGFALALAGVVLARAR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29076; Mature: 28945
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALLAAAAFVALWSTGFVVARAIPPYADPNLYLLARFGGTALLFGAIALATRARWPAGR CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCH EWGRHLLAGALLQGCYLGASYWAVAQGLPAGVMALLGALQPLATAALAVPLFGERLPARG HHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WAGMALGLAGVALVLAPKLAAPAAAAGLSAFTVLVALLAIASITAGSLYQKTAVARTDLR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTVAVQNAGAAAVAAGFALALGETRWIASPTLWFSLAWGVTMLSGGAIVLLVWLLRRGGA HHEEECCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC ARATSLMFLAPPLAALQGYLLFGETLGAPQLAGFALALAGVVLARAR HHHHHHHEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PALLAAAAFVALWSTGFVVARAIPPYADPNLYLLARFGGTALLFGAIALATRARWPAGR CHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCH EWGRHLLAGALLQGCYLGASYWAVAQGLPAGVMALLGALQPLATAALAVPLFGERLPARG HHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WAGMALGLAGVALVLAPKLAAPAAAAGLSAFTVLVALLAIASITAGSLYQKTAVARTDLR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTVAVQNAGAAAVAAGFALALGETRWIASPTLWFSLAWGVTMLSGGAIVLLVWLLRRGGA HHEEECCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC ARATSLMFLAPPLAALQGYLLFGETLGAPQLAGFALALAGVVLARAR HHHHHHHEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA