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The map label for this gene is ycjP [C]

Identifier: 238023867

GI number: 238023867

Start: 486060

End: 486911

Strand: Direct

Name: ycjP [C]

Synonym: bglu_2g04060

Alternate gene names: 238023867

Gene position: 486060-486911 (Clockwise)

Preceding gene: 238023866

Following gene: 238023868

Centisome position: 17.19

GC content: 67.14

Gene sequence:

>852_bases
ATGTATCCCATGCCCGTTTCCCGCTGGAGCCGGCCGTCGCGCTGGCTCTATGGCGTGTCCCTGCCCTGCGCGCTCGCGCT
GTGGCTCACGCCGCTGATGGCCGTGCTGGTCACCTCGATCCGCTCCAGCGACGAGCTGGCGGCCGGCCACTACTGGTCCT
GGCCGCAGCACTTCGCGCTGCTCGACAACTACGGCACCGCGCTGACCCAGACGCCGATGCTCCATTACTTCGCGAACAGC
ATCCTGATCACCGTGCCGTCGGTGGTCGCGTCGATCCTGCTCGCCTCGCTGGCCGGGCACGCGCTCGCCAACTACCGGTT
CCGCGGCAACGCGGTGCTGCTCGGGCTGTTCGTCGCCGGCAACTTCGTGCCGATCCAGATCCTGATGATCCCGGTGCGGC
AGCTCATGCTCGGCATCGGCCTCTACAACACGGTATGGGCGCTGGTGCTGTTCCATACCGCGTTCCAGACCGGCTTTTGC
ACGCTGTTCCTGCGCAACTTCATTCGCGAGCTGCCGTTCGAGCTGATCGAGGCCGCGCGCGTGGAAGGCGCGAGCGAATG
GACGATCTACCTGCGCGTCGTGCTGCCGCTGGTGCGGCCCGCCCTCGCGGCGCTCGCGATTCTGGTGTTCACCTTCGTCT
GGAACGACTACTTCTGGGCACTGTGCCTGACCCAGGGCGACGATGCCGCGCCGATCACGGTGGGCGTCGCCGCGCTGAGA
GGGCAATGGACCACCGCGTGGAACCTGGTGTCGGCCGGCTCGGTGCTGGCCGCGCTGCCGTCGGTCGCGATGTTCTTCGC
GATGCAGAAACACTTCGTCGCCGGCCTGACGTTCGGCGCGACCAAAGGATGA

Upstream 100 bases:

>100_bases
TCGCGGTCGTGCTGTTCGCGATCATGCTCGTCTATATCGCGTGGCAACTGCGCAAGCTCGTGCGCAGCGAATCCTGATCC
CGTACCGGAGCCCGAAGTCC

Downstream 100 bases:

>100_bases
CCCGATGAGCCTTTCTCCTGCCGGCACGAACGCCGCGATGCGCCTTGGCGTCTGCTATTACCCCGAGCAGTGGCCGCGCG
AACAATGGGCGAGCGATGCG

Product: Binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MYPMPVSRWSRPSRWLYGVSLPCALALWLTPLMAVLVTSIRSSDELAAGHYWSWPQHFALLDNYGTALTQTPMLHYFANS
ILITVPSVVASILLASLAGHALANYRFRGNAVLLGLFVAGNFVPIQILMIPVRQLMLGIGLYNTVWALVLFHTAFQTGFC
TLFLRNFIRELPFELIEAARVEGASEWTIYLRVVLPLVRPALAALAILVFTFVWNDYFWALCLTQGDDAAPITVGVAALR
GQWTTAWNLVSAGSVLAALPSVAMFFAMQKHFVAGLTFGATKG

Sequences:

>Translated_283_residues
MYPMPVSRWSRPSRWLYGVSLPCALALWLTPLMAVLVTSIRSSDELAAGHYWSWPQHFALLDNYGTALTQTPMLHYFANS
ILITVPSVVASILLASLAGHALANYRFRGNAVLLGLFVAGNFVPIQILMIPVRQLMLGIGLYNTVWALVLFHTAFQTGFC
TLFLRNFIRELPFELIEAARVEGASEWTIYLRVVLPLVRPALAALAILVFTFVWNDYFWALCLTQGDDAAPITVGVAALR
GQWTTAWNLVSAGSVLAALPSVAMFFAMQKHFVAGLTFGATKG
>Mature_283_residues
MYPMPVSRWSRPSRWLYGVSLPCALALWLTPLMAVLVTSIRSSDELAAGHYWSWPQHFALLDNYGTALTQTPMLHYFANS
ILITVPSVVASILLASLAGHALANYRFRGNAVLLGLFVAGNFVPIQILMIPVRQLMLGIGLYNTVWALVLFHTAFQTGFC
TLFLRNFIRELPFELIEAARVEGASEWTIYLRVVLPLVRPALAALAILVFTFVWNDYFWALCLTQGDDAAPITVGVAALR
GQWTTAWNLVSAGSVLAALPSVAMFFAMQKHFVAGLTFGATKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=27.4368231046931, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789860, Length=214, Percent_Identity=27.5700934579439, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787368, Length=153, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790464, Length=267, Percent_Identity=24.7191011235955, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31197; Mature: 31197

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPMPVSRWSRPSRWLYGVSLPCALALWLTPLMAVLVTSIRSSDELAAGHYWSWPQHFAL
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LDNYGTALTQTPMLHYFANSILITVPSVVASILLASLAGHALANYRFRGNAVLLGLFVAG
HHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEHHC
NFVPIQILMIPVRQLMLGIGLYNTVWALVLFHTAFQTGFCTLFLRNFIRELPFELIEAAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VEGASEWTIYLRVVLPLVRPALAALAILVFTFVWNDYFWALCLTQGDDAAPITVGVAALR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHC
GQWTTAWNLVSAGSVLAALPSVAMFFAMQKHFVAGLTFGATKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYPMPVSRWSRPSRWLYGVSLPCALALWLTPLMAVLVTSIRSSDELAAGHYWSWPQHFAL
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LDNYGTALTQTPMLHYFANSILITVPSVVASILLASLAGHALANYRFRGNAVLLGLFVAG
HHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEHHC
NFVPIQILMIPVRQLMLGIGLYNTVWALVLFHTAFQTGFCTLFLRNFIRELPFELIEAAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VEGASEWTIYLRVVLPLVRPALAALAILVFTFVWNDYFWALCLTQGDDAAPITVGVAALR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHC
GQWTTAWNLVSAGSVLAALPSVAMFFAMQKHFVAGLTFGATKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]